RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 LMOD2Q6P5Q4 547 aa13.04□□□□□ -0.32
SEMA4D-215ENST00000469653 KIF20BQ96Q89 1820 aa13.04□□□□□ -0.32
SEMA4D-215ENST00000469653 SBNO1A3KN83 1393 aa13.04□□□□□ -0.32
SEMA4D-215ENST00000469653 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
SEMA4D-215ENST00000469653 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
SEMA4D-215ENST00000469653 HSP90B1P14625 803 aaKnown RBP13.03□□□□□ -0.32
SEMA4D-215ENST00000469653 ABTB2Q8N961 1025 aa13.03□□□□□ -0.32
SEMA4D-215ENST00000469653 TTC21AQ8NDW8 1320 aa13.03□□□□□ -0.32
SEMA4D-215ENST00000469653 PIK3C2AO00443 1686 aa13.03□□□□□ -0.32
SEMA4D-215ENST00000469653 NME9Q86XW9 330 aa13.02□□□□□ -0.32
SEMA4D-215ENST00000469653 FBXO41Q8TF61 875 aa13.02□□□□□ -0.32
SEMA4D-215ENST00000469653 SPATA31A3Q5VYP0 1347 aa13.02□□□□□ -0.32
SEMA4D-215ENST00000469653 TNS3Q68CZ2 1445 aa13.02□□□□□ -0.32
SEMA4D-215ENST00000469653 NUTM2GQ5VZR2 741 aa13.02□□□□□ -0.32
SEMA4D-215ENST00000469653 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.32
SEMA4D-215ENST00000469653 PHF23Q9BUL5 403 aaPredicted RBP13.02□□□□□ -0.32
SEMA4D-215ENST00000469653 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
SEMA4D-215ENST00000469653 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.33
SEMA4D-215ENST00000469653 BRPF3Q9ULD4 1205 aa13.02□□□□□ -0.33
SEMA4D-215ENST00000469653 FYB1O15117 783 aa13.01□□□□□ -0.33
SEMA4D-215ENST00000469653 HSPA1LP34931 641 aa13.01□□□□□ -0.33
SEMA4D-215ENST00000469653 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
SEMA4D-215ENST00000469653 PLIN1O60240 522 aa13.01□□□□□ -0.33
SEMA4D-215ENST00000469653 NEFMP07197 916 aa13.01□□□□□ -0.33
SEMA4D-215ENST00000469653 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-215ENST00000469653 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
SEMA4D-215ENST00000469653 CCDC9Q9Y3X0 531 aaKnown RBP13.01□□□□□ -0.33
SEMA4D-215ENST00000469653 RRP1P56182 461 aaKnown RBP13□□□□□ -0.33
SEMA4D-215ENST00000469653 GGNBP2Q9H3C7 697 aa13□□□□□ -0.33
SEMA4D-215ENST00000469653 NLRP6P59044 892 aa13□□□□□ -0.33
SEMA4D-215ENST00000469653 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
SEMA4D-215ENST00000469653 ARHGEF10O15013 1369 aa12.99□□□□□ -0.33
SEMA4D-215ENST00000469653 PDE4AP27815 886 aa12.99□□□□□ -0.33
SEMA4D-215ENST00000469653 ANKRD26Q9UPS8 1709 aa12.98□□□□□ -0.33
SEMA4D-215ENST00000469653 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 NLRP13Q86W25 1043 aa12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 COG3Q96JB2 828 aa12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 ZMYND15Q9H091 742 aa12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 BACH2Q9BYV9 841 aa12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 USP54Q70EL1 1684 aa12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 NSD2O96028 1365 aa12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
SEMA4D-215ENST00000469653 CABLES1Q8TDN4 633 aa12.96□□□□□ -0.33
SEMA4D-215ENST00000469653 PNPLA6Q8IY17 1366 aa12.96□□□□□ -0.33
SEMA4D-215ENST00000469653 OVOS2A0A0J9YW53 1432 aa12.96□□□□□ -0.33
SEMA4D-215ENST00000469653 OVOS2Q6IE36 1432 aa12.96□□□□□ -0.33
SEMA4D-215ENST00000469653 GLIPR1L2Q4G1C9 344 aa12.96□□□□□ -0.33
SEMA4D-215ENST00000469653 SHPRHQ149N8 1683 aa12.96□□□□□ -0.33
SEMA4D-215ENST00000469653 NPC1L1Q9UHC9 1359 aa12.96□□□□□ -0.34
SEMA4D-215ENST00000469653 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-215ENST00000469653 MORC1Q86VD1 984 aa12.95□□□□□ -0.34
SEMA4D-215ENST00000469653 RCAN3Q9UKA8 241 aa12.95□□□□□ -0.34
SEMA4D-215ENST00000469653 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-215ENST00000469653 CRYBG1Q9Y4K1 1723 aa12.95□□□□□ -0.34
SEMA4D-215ENST00000469653 SOX12O15370 315 aa12.95□□□□□ -0.34
SEMA4D-215ENST00000469653 JCADQ9P266 1359 aa12.95□□□□□ -0.34
SEMA4D-215ENST00000469653 TNNT2P45379 298 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-215ENST00000469653 PHRF1Q9P1Y6 1649 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-215ENST00000469653 ABCA3Q99758 1704 aa12.94□□□□□ -0.34
SEMA4D-215ENST00000469653 USP19O94966 1318 aa12.94□□□□□ -0.34
SEMA4D-215ENST00000469653 FBLN1P23142 703 aa12.93□□□□□ -0.34
SEMA4D-215ENST00000469653 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-215ENST00000469653 MAP2P11137 1827 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-215ENST00000469653 SLIT3O75094 1523 aa12.92□□□□□ -0.34
SEMA4D-215ENST00000469653 GCP02774 474 aa12.92□□□□□ -0.34
SEMA4D-215ENST00000469653 USP35Q9P2H5 1018 aa12.92□□□□□ -0.34
SEMA4D-215ENST00000469653 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-215ENST00000469653 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-215ENST00000469653 NUTM2AQ8IVF1 878 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-215ENST00000469653 KCNH5Q8NCM2 988 aa12.91□□□□□ -0.34
SEMA4D-215ENST00000469653 MS4A1P11836 297 aa12.91□□□□□ -0.34
SEMA4D-215ENST00000469653 RGS3P49796 1198 aa12.91□□□□□ -0.34
SEMA4D-215ENST00000469653 CDCA7LQ96GN5 454 aa12.91□□□□□ -0.34
SEMA4D-215ENST00000469653 NFAT5O94916 1531 aa12.9□□□□□ -0.34
SEMA4D-215ENST00000469653 PARD3Q8TEW0 1356 aa12.9□□□□□ -0.34
SEMA4D-215ENST00000469653 LTN1O94822 1766 aa12.9□□□□□ -0.34
SEMA4D-215ENST00000469653 ZC3H6P61129 1189 aaKnown RBP12.9□□□□□ -0.34
SEMA4D-215ENST00000469653 ZNF592Q92610 1267 aa12.9□□□□□ -0.34
SEMA4D-215ENST00000469653 ZFP91Q96JP5 570 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-215ENST00000469653 RALBP1Q15311 655 aa12.89□□□□□ -0.35
SEMA4D-215ENST00000469653 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
SEMA4D-215ENST00000469653 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-215ENST00000469653 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
SEMA4D-215ENST00000469653 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
SEMA4D-215ENST00000469653 ADAMTS2O95450 1211 aa12.88□□□□□ -0.35
SEMA4D-215ENST00000469653 AATKQ6ZMQ8 1374 aa12.88□□□□□ -0.35
SEMA4D-215ENST00000469653 ILDR1Q86SU0 546 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-215ENST00000469653 KIAA0232Q92628 1395 aa12.87□□□□□ -0.35
SEMA4D-215ENST00000469653 PPM1GO15355 546 aaPredicted RBP12.87□□□□□ -0.35
SEMA4D-215ENST00000469653 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
SEMA4D-215ENST00000469653 POLKQ9UBT6 870 aa12.87□□□□□ -0.35
SEMA4D-215ENST00000469653 EMILIN1Q9Y6C2 1016 aa12.87□□□□□ -0.35
SEMA4D-215ENST00000469653 MAP3K19Q56UN5 1328 aa12.86□□□□□ -0.35
SEMA4D-215ENST00000469653 ARHGEF25Q86VW2 580 aa12.86□□□□□ -0.35
SEMA4D-215ENST00000469653 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
SEMA4D-215ENST00000469653 LRP6O75581 1613 aa12.86□□□□□ -0.35
SEMA4D-215ENST00000469653 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 SPRYD3Q8NCJ5 442 aa12.85□□□□□ -0.35
SEMA4D-215ENST00000469653 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms