RNA–Protein interactions for RNA: ENST00000469507.1

FAM49A-205, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 2

Gene FAM49A, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-205ENST00000469507 TMEM164Q5U3C3 297 aa7.88□□□□□ -1.15
FAM49A-205ENST00000469507 CRIPAKQ8N1N5 446 aa7.88□□□□□ -1.15
FAM49A-205ENST00000469507 HLA-CQ95604 372 aa7.88□□□□□ -1.15
FAM49A-205ENST00000469507 C6orf229H3BNL8 230 aa7.87□□□□□ -1.15
FAM49A-205ENST00000469507 HMGB1P09429 215 aaKnown RBP7.87□□□□□ -1.15
FAM49A-205ENST00000469507 PHLDB3Q6NSJ2 640 aa7.87□□□□□ -1.15
FAM49A-205ENST00000469507 NFATC2IPQ8NCF5 419 aa7.87□□□□□ -1.15
FAM49A-205ENST00000469507 TOR4AQ9NXH8 423 aa7.87□□□□□ -1.15
FAM49A-205ENST00000469507 GMPR2Q9P2T1 348 aaKnown RBP7.87□□□□□ -1.15
FAM49A-205ENST00000469507 AVPP01185 164 aa7.86□□□□□ -1.15
FAM49A-205ENST00000469507 SIRT1Q96EB6 747 aa7.86□□□□□ -1.15
FAM49A-205ENST00000469507 ZMIZ1Q9ULJ6 1067 aa7.86□□□□□ -1.15
FAM49A-205ENST00000469507 WFS1O76024 890 aa7.85□□□□□ -1.15
FAM49A-205ENST00000469507 SSFA2P28290 1259 aa7.85□□□□□ -1.15
FAM49A-205ENST00000469507 RPIAP49247 311 aa7.85□□□□□ -1.15
FAM49A-205ENST00000469507 NR1H3Q13133 447 aa7.85□□□□□ -1.15
FAM49A-205ENST00000469507 DNAJC14Q6Y2X3 702 aaPredicted RBP7.85□□□□□ -1.15
FAM49A-205ENST00000469507 NOVA2Q9UNW9 492 aaKnown RBP7.85□□□□□ -1.15
FAM49A-205ENST00000469507 FCF1Q9Y324 198 aaKnown RBP7.85□□□□□ -1.15
FAM49A-205ENST00000469507 AXIN1O15169 862 aa7.84□□□□□ -1.15
FAM49A-205ENST00000469507 STK32AQ8WU08 396 aa7.84□□□□□ -1.15
FAM49A-205ENST00000469507 C11orf95C9JLR9 678 aaPredicted RBP7.83□□□□□ -1.16
FAM49A-205ENST00000469507 PLEKHM2Q8IWE5 1019 aa7.83□□□□□ -1.16
FAM49A-205ENST00000469507 CYP4X1Q8N118 509 aa7.83□□□□□ -1.16
FAM49A-205ENST00000469507 MRRFQ96E11 262 aaKnown RBP7.83□□□□□ -1.16
FAM49A-205ENST00000469507 THAP11Q96EK4 314 aa7.83□□□□□ -1.16
FAM49A-205ENST00000469507 KIAA1522Q9P206 1035 aaPredicted RBP7.83□□□□□ -1.16
FAM49A-205ENST00000469507 FAM196BA6NMK8 535 aa7.82□□□□□ -1.16
FAM49A-205ENST00000469507 CD2BP2O95400 341 aaKnown RBP7.82□□□□□ -1.16
FAM49A-205ENST00000469507 NFX1Q12986 1120 aaKnown RBP7.82□□□□□ -1.16
FAM49A-205ENST00000469507 MORN1Q5T089 497 aa7.82□□□□□ -1.16
FAM49A-205ENST00000469507 FAM160A2Q8N612 972 aaPredicted RBP7.82□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L3A6NCW0 530 aa7.81□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L4A6NCW7 530 aa7.81□□□□□ -1.16
FAM49A-205ENST00000469507 PER1O15534 1290 aaPredicted RBP7.81□□□□□ -1.16
FAM49A-205ENST00000469507 SKIP12755 728 aa7.81□□□□□ -1.16
FAM49A-205ENST00000469507 DESI1Q6ICB0 168 aa7.81□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L2Q6R6M4 530 aa7.81□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L1Q7RTZ2 530 aa7.81□□□□□ -1.16
FAM49A-205ENST00000469507 CDCA7Q9BWT1 371 aaPredicted RBP7.81□□□□□ -1.16
FAM49A-205ENST00000469507 SOWAHDA6NJG2 315 aa7.8□□□□□ -1.16
FAM49A-205ENST00000469507 ZBBXA8MT70 800 aa7.8□□□□□ -1.16
FAM49A-205ENST00000469507 PIK3CDO00329 1044 aa7.8□□□□□ -1.16
FAM49A-205ENST00000469507 ATP6V1AP38606 617 aa7.8□□□□□ -1.16
FAM49A-205ENST00000469507 SMCPP49901 116 aaPredicted RBP7.8□□□□□ -1.16
FAM49A-205ENST00000469507 FUT2Q10981 343 aa7.8□□□□□ -1.16
FAM49A-205ENST00000469507 CTC1Q2NKJ3 1217 aa7.8□□□□□ -1.16
FAM49A-205ENST00000469507 SYMPKQ92797 1274 aaKnown RBP7.8□□□□□ -1.16
FAM49A-205ENST00000469507 CLP1Q92989 425 aaKnown RBP7.8□□□□□ -1.16
FAM49A-205ENST00000469507 PRDM9Q9NQV7 894 aa7.8□□□□□ -1.16
FAM49A-205ENST00000469507 FBXO45P0C2W1 286 aa7.79□□□□□ -1.16
FAM49A-205ENST00000469507 ZNF16P17020 682 aaPredicted RBP7.79□□□□□ -1.16
FAM49A-205ENST00000469507 LARP1Q6PKG0 1096 aaKnown RBP7.79□□□□□ -1.16
FAM49A-205ENST00000469507 FAM200AQ8TCP9 573 aa7.79□□□□□ -1.16
FAM49A-205ENST00000469507 PUS7Q96PZ0 661 aaKnown RBP7.79□□□□□ -1.16
FAM49A-205ENST00000469507 MKRN1Q9UHC7 482 aaKnown RBP7.79□□□□□ -1.16
FAM49A-205ENST00000469507 SLC27A5Q9Y2P5 690 aa7.79□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L5A8MUK1 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L15C9J2P7 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L10C9JJH3 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L13C9JLJ4 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L12C9JPN9 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L11C9JVI0 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L21D6R901 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L18D6R9N7 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L22D6RA61 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L17D6RBQ6 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L19D6RCP7 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L20D6RJB6 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 LZTS3O60299 673 aaPredicted RBP7.78□□□□□ -1.16
FAM49A-205ENST00000469507 HSP90B1P14625 803 aaKnown RBP7.78□□□□□ -1.16
FAM49A-205ENST00000469507 FAM69CQ0P6D2 419 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 USP17L24Q0WX57 530 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 NOM1Q5C9Z4 860 aaKnown RBP7.78□□□□□ -1.16
FAM49A-205ENST00000469507 LCE2CQ5TA81 110 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 LYPD8Q6UX82 237 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 RETREG3Q86VR2 466 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 BCL2L13Q9BXK5 485 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 SLAIN2Q9P270 581 aa7.78□□□□□ -1.16
FAM49A-205ENST00000469507 TTC24A2A3L6 582 aaPredicted RBP7.77□□□□□ -1.17
FAM49A-205ENST00000469507 WIPF1O43516 503 aa7.77□□□□□ -1.17
FAM49A-205ENST00000469507 FMNL1O95466 1100 aaPredicted RBP7.77□□□□□ -1.17
FAM49A-205ENST00000469507 MARSP56192 900 aaKnown RBP7.77□□□□□ -1.17
FAM49A-205ENST00000469507 PTK7Q13308 1070 aa7.77□□□□□ -1.17
FAM49A-205ENST00000469507 STK17AQ9UEE5 414 aa7.77□□□□□ -1.17
FAM49A-205ENST00000469507 ATP5J2-PTCD1G3V325 749 aa7.76□□□□□ -1.17
FAM49A-205ENST00000469507 SMPD1P17405 629 aa7.76□□□□□ -1.17
FAM49A-205ENST00000469507 CRTC2Q53ET0 693 aaPredicted RBP7.76□□□□□ -1.17
FAM49A-205ENST00000469507 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
FAM49A-205ENST00000469507 RASA1P20936 1047 aa7.75□□□□□ -1.17
FAM49A-205ENST00000469507 MCCD1P59942 119 aaPredicted RBP7.75□□□□□ -1.17
FAM49A-205ENST00000469507 BRICD5Q6PL45 260 aa7.75□□□□□ -1.17
FAM49A-205ENST00000469507 DEPDC4Q8N2C3 294 aa7.75□□□□□ -1.17
FAM49A-205ENST00000469507 FKBPLQ9UIM3 349 aa7.75□□□□□ -1.17
FAM49A-205ENST00000469507 ZC3H4Q9UPT8 1303 aaKnown RBP7.75□□□□□ -1.17
FAM49A-205ENST00000469507 ATP2B4P23634 1241 aa7.74□□□□□ -1.17
FAM49A-205ENST00000469507 Q3C1V9 767 aa7.74□□□□□ -1.17
FAM49A-205ENST00000469507 ANKMY2Q8IV38 441 aa7.74□□□□□ -1.17
FAM49A-205ENST00000469507 C1orf216Q8TAB5 229 aa7.74□□□□□ -1.17
FAM49A-205ENST00000469507 FAM174AQ8TBP5 190 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms