RNA–Protein interactions for RNA: ENST00000469354.1

EPHA4-211, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 2,893 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-211ENST00000469354 BCL2L13Q9BXK5 485 aa11.15□□□□□ -0.62
EPHA4-211ENST00000469354 IL13P35225 146 aa11.14□□□□□ -0.63
EPHA4-211ENST00000469354 RSPH6AQ9H0K4 717 aa11.14□□□□□ -0.63
EPHA4-211ENST00000469354 AKAP12Q02952 1782 aa11.14□□□□□ -0.63
EPHA4-211ENST00000469354 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
EPHA4-211ENST00000469354 ARID3AQ99856 593 aa11.14□□□□□ -0.63
EPHA4-211ENST00000469354 AATKQ6ZMQ8 1374 aa11.14□□□□□ -0.63
EPHA4-211ENST00000469354 ADAMTSL3P82987 1691 aa11.14□□□□□ -0.63
EPHA4-211ENST00000469354 FGD1P98174 961 aa11.14□□□□□ -0.63
EPHA4-211ENST00000469354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
EPHA4-211ENST00000469354 PIK3R4Q99570 1358 aa11.13□□□□□ -0.63
EPHA4-211ENST00000469354 NUTM2GQ5VZR2 741 aa11.13□□□□□ -0.63
EPHA4-211ENST00000469354 PAK3O75914 559 aaPredicted RBP11.12□□□□□ -0.63
EPHA4-211ENST00000469354 RARSP54136 660 aaKnown RBP11.12□□□□□ -0.63
EPHA4-211ENST00000469354 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
EPHA4-211ENST00000469354 RGPD8O14715 1765 aaPredicted RBP11.12□□□□□ -0.63
EPHA4-211ENST00000469354 FANCIQ9NVI1 1328 aa11.12□□□□□ -0.63
EPHA4-211ENST00000469354 XRN1Q8IZH2 1706 aaKnown RBP11.12□□□□□ -0.63
EPHA4-211ENST00000469354 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
EPHA4-211ENST00000469354 TOPAZ1Q8N9V7 1692 aa11.11□□□□□ -0.63
EPHA4-211ENST00000469354 NLRP6P59044 892 aa11.11□□□□□ -0.63
EPHA4-211ENST00000469354 EXOSC9Q06265 439 aaKnown RBP11.11□□□□□ -0.63
EPHA4-211ENST00000469354 HSP90AB2PQ58FF8 381 aa11.11□□□□□ -0.63
EPHA4-211ENST00000469354 PANK1Q8TE04 598 aa11.11□□□□□ -0.63
EPHA4-211ENST00000469354 LRRC7Q96NW7 1537 aa11.11□□□□□ -0.63
EPHA4-211ENST00000469354 THUMPD2Q9BTF0 503 aaKnown RBP11.1□□□□□ -0.63
EPHA4-211ENST00000469354 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
EPHA4-211ENST00000469354 EIF4A2Q14240 407 aaKnown RBP11.1□□□□□ -0.63
EPHA4-211ENST00000469354 NFE2L2Q16236 605 aa11.1□□□□□ -0.63
EPHA4-211ENST00000469354 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
EPHA4-211ENST00000469354 AEBP1Q8IUX7 1158 aa11.1□□□□□ -0.63
EPHA4-211ENST00000469354 OVOS2A0A0J9YW53 1432 aa11.09□□□□□ -0.63
EPHA4-211ENST00000469354 OVOS2Q6IE36 1432 aa11.09□□□□□ -0.63
EPHA4-211ENST00000469354 COG6Q9Y2V7 657 aa11.09□□□□□ -0.63
EPHA4-211ENST00000469354 ABTB2Q8N961 1025 aa11.09□□□□□ -0.63
EPHA4-211ENST00000469354 CLUAP1Q96AJ1 413 aa11.09□□□□□ -0.63
EPHA4-211ENST00000469354 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
EPHA4-211ENST00000469354 SSH2Q76I76 1423 aa11.09□□□□□ -0.63
EPHA4-211ENST00000469354 AMPHP49418 695 aa11.08□□□□□ -0.64
EPHA4-211ENST00000469354 ZNF142P52746 1687 aaPredicted RBP11.08□□□□□ -0.64
EPHA4-211ENST00000469354 MAP3K19Q56UN5 1328 aa11.08□□□□□ -0.64
EPHA4-211ENST00000469354 ESCO1Q5FWF5 840 aa11.08□□□□□ -0.64
EPHA4-211ENST00000469354 SKAP1Q86WV1 359 aa11.08□□□□□ -0.64
EPHA4-211ENST00000469354 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
EPHA4-211ENST00000469354 NRKQ7Z2Y5 1582 aa11.08□□□□□ -0.64
EPHA4-211ENST00000469354 PDE3AQ14432 1141 aa11.08□□□□□ -0.64
EPHA4-211ENST00000469354 PAXIP1Q6ZW49 1069 aaPredicted RBP11.08□□□□□ -0.64
EPHA4-211ENST00000469354 TNNQ9UQP3 1299 aa11.08□□□□□ -0.64
EPHA4-211ENST00000469354 ANKARQ7Z5J8 1434 aa11.07□□□□□ -0.64
EPHA4-211ENST00000469354 CHD2O14647 1828 aaKnown RBP11.07□□□□□ -0.64
EPHA4-211ENST00000469354 IL16Q14005 1332 aa11.07□□□□□ -0.64
EPHA4-211ENST00000469354 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
EPHA4-211ENST00000469354 SMC4Q9NTJ3 1288 aa11.07□□□□□ -0.64
EPHA4-211ENST00000469354 USP31Q70CQ4 1352 aa11.07□□□□□ -0.64
EPHA4-211ENST00000469354 FAM83GA6ND36 823 aa11.06□□□□□ -0.64
EPHA4-211ENST00000469354 DCTN1Q14203 1278 aa11.06□□□□□ -0.64
EPHA4-211ENST00000469354 PSME1Q06323 249 aa11.06□□□□□ -0.64
EPHA4-211ENST00000469354 PROSER2Q86WR7 435 aaPredicted RBP11.06□□□□□ -0.64
EPHA4-211ENST00000469354 RLBP1P12271 317 aa11.05□□□□□ -0.64
EPHA4-211ENST00000469354 SSH1Q8WYL5 1049 aa11.05□□□□□ -0.64
EPHA4-211ENST00000469354 CT47B1P0C2W7 299 aaPredicted RBP11.04□□□□□ -0.64
EPHA4-211ENST00000469354 XPCQ01831 940 aaPredicted RBP11.04□□□□□ -0.64
EPHA4-211ENST00000469354 CALD1Q05682 793 aaKnown RBP11.04□□□□□ -0.64
EPHA4-211ENST00000469354 FMN2Q9NZ56 1722 aa11.04□□□□□ -0.64
EPHA4-211ENST00000469354 ELL2O00472 640 aaPredicted RBP11.04□□□□□ -0.64
EPHA4-211ENST00000469354 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
EPHA4-211ENST00000469354 CENPQQ7L2Z9 268 aaPredicted RBP11.04□□□□□ -0.64
EPHA4-211ENST00000469354 FTSJ3Q8IY81 847 aaKnown RBP11.04□□□□□ -0.64
EPHA4-211ENST00000469354 LTV1Q96GA3 475 aaPredicted RBP11.04□□□□□ -0.64
EPHA4-211ENST00000469354 NALCNQ8IZF0 1738 aa11.04□□□□□ -0.64
EPHA4-211ENST00000469354 ZBTB7CA1YPR0 619 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 ORAI2Q96SN7 254 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 ADGRL3Q9HAR2 1447 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 FOXO3O43524 673 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 FLT4P35916 1363 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 KDM2BQ8NHM5 1336 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
EPHA4-211ENST00000469354 TCERG1O14776 1098 aaKnown RBP11.02□□□□□ -0.64
EPHA4-211ENST00000469354 GNAI1P63096 354 aa11.02□□□□□ -0.64
EPHA4-211ENST00000469354 PEAK1Q9H792 1746 aa11.02□□□□□ -0.64
EPHA4-211ENST00000469354 PIK3C2AO00443 1686 aa11.02□□□□□ -0.65
EPHA4-211ENST00000469354 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.65
EPHA4-211ENST00000469354 HSPA2P54652 639 aa11.02□□□□□ -0.65
EPHA4-211ENST00000469354 DZIP1LQ8IYY4 767 aaKnown RBP11.02□□□□□ -0.65
EPHA4-211ENST00000469354 MBIPQ9NS73 344 aa11.02□□□□□ -0.65
EPHA4-211ENST00000469354 NOB1Q9ULX3 412 aaKnown RBP11.02□□□□□ -0.65
EPHA4-211ENST00000469354 MCM10Q7L590 875 aa11.01□□□□□ -0.65
EPHA4-211ENST00000469354 EYA1Q99502 592 aa11.01□□□□□ -0.65
EPHA4-211ENST00000469354 IFT57Q9NWB7 429 aa11.01□□□□□ -0.65
EPHA4-211ENST00000469354 TSPYL6Q8N831 410 aa11.01□□□□□ -0.65
EPHA4-211ENST00000469354 ZNF428Q96B54 188 aa11.01□□□□□ -0.65
EPHA4-211ENST00000469354 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
EPHA4-211ENST00000469354 IGHDP01880 384 aa11□□□□□ -0.65
EPHA4-211ENST00000469354 TRIM27P14373 513 aa11□□□□□ -0.65
EPHA4-211ENST00000469354 HOXC9P31274 260 aa11□□□□□ -0.65
EPHA4-211ENST00000469354 RGS3P49796 1198 aa10.99□□□□□ -0.65
EPHA4-211ENST00000469354 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
EPHA4-211ENST00000469354 DLG5Q8TDM6 1919 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms