RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 SOX12O15370 315 aa19.77■□□□□ 0.76
CRAMP1-206ENST00000468839 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
CRAMP1-206ENST00000468839 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
CRAMP1-206ENST00000468839 MED1Q15648 1581 aaPredicted RBP19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 GCP02774 474 aa19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 HOXC9P31274 260 aa19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 WWC1Q8IX03 1113 aa19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 TRMT2AQ8IZ69 625 aaKnown RBP19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 RGPD5Q99666 1765 aa19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 SPATA31A3Q5VYP0 1347 aa19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 MAPK8IP3Q9UPT6 1336 aa19.75■□□□□ 0.75
CRAMP1-206ENST00000468839 TMPOP42166 694 aaKnown RBP19.74■□□□□ 0.75
CRAMP1-206ENST00000468839 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
CRAMP1-206ENST00000468839 IP6K1Q92551 441 aa19.74■□□□□ 0.75
CRAMP1-206ENST00000468839 DDX17Q92841 729 aaKnown RBP19.74■□□□□ 0.75
CRAMP1-206ENST00000468839 SOS2Q07890 1332 aaPredicted RBP19.74■□□□□ 0.75
CRAMP1-206ENST00000468839 ARHGEF10O15013 1369 aa19.73■□□□□ 0.75
CRAMP1-206ENST00000468839 PRKAR2BP31323 418 aa19.73■□□□□ 0.75
CRAMP1-206ENST00000468839 WDR63Q8IWG1 891 aa19.73■□□□□ 0.75
CRAMP1-206ENST00000468839 SUPT16HQ9Y5B9 1047 aaKnown RBP19.73■□□□□ 0.75
CRAMP1-206ENST00000468839 NEFMP07197 916 aa19.72■□□□□ 0.75
CRAMP1-206ENST00000468839 LMOD2Q6P5Q4 547 aa19.72■□□□□ 0.75
CRAMP1-206ENST00000468839 ARHGEF25Q86VW2 580 aa19.72■□□□□ 0.75
CRAMP1-206ENST00000468839 RGPD2P0DJD1 1756 aa19.71■□□□□ 0.75
CRAMP1-206ENST00000468839 HMOX1P09601 288 aa19.71■□□□□ 0.75
CRAMP1-206ENST00000468839 COL18A1P39060 1754 aa19.7■□□□□ 0.74
CRAMP1-206ENST00000468839 E9PSI1 815 aa19.7■□□□□ 0.74
CRAMP1-206ENST00000468839 DUSP27Q5VZP5 1158 aa19.7■□□□□ 0.74
CRAMP1-206ENST00000468839 RRP7AQ9Y3A4 280 aaKnown RBP19.7■□□□□ 0.74
CRAMP1-206ENST00000468839 NEUROD2Q15784 382 aa19.69■□□□□ 0.74
CRAMP1-206ENST00000468839 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
CRAMP1-206ENST00000468839 KDRP35968 1356 aa19.69■□□□□ 0.74
CRAMP1-206ENST00000468839 NFE2L2Q16236 605 aa19.68■□□□□ 0.74
CRAMP1-206ENST00000468839 SULT6B1Q6IMI4 303 aa19.68■□□□□ 0.74
CRAMP1-206ENST00000468839 TRIM35Q9UPQ4 493 aa19.68■□□□□ 0.74
CRAMP1-206ENST00000468839 RNF123Q5XPI4 1314 aa19.68■□□□□ 0.74
CRAMP1-206ENST00000468839 ABCC6O95255 1503 aa19.67■□□□□ 0.74
CRAMP1-206ENST00000468839 RIPK4P57078 832 aa19.67■□□□□ 0.74
CRAMP1-206ENST00000468839 PHACTR3Q96KR7 559 aa19.67■□□□□ 0.74
CRAMP1-206ENST00000468839 EYA1Q99502 592 aa19.67■□□□□ 0.74
CRAMP1-206ENST00000468839 ROBO1Q9Y6N7 1651 aa19.67■□□□□ 0.74
CRAMP1-206ENST00000468839 ABCA3Q99758 1704 aa19.66■□□□□ 0.74
CRAMP1-206ENST00000468839 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
CRAMP1-206ENST00000468839 NEFLP07196 543 aa19.65■□□□□ 0.74
CRAMP1-206ENST00000468839 IL16Q14005 1332 aa19.65■□□□□ 0.74
CRAMP1-206ENST00000468839 CAMTA1Q9Y6Y1 1673 aa19.65■□□□□ 0.74
CRAMP1-206ENST00000468839 AEBP1Q8IUX7 1158 aa19.64■□□□□ 0.73
CRAMP1-206ENST00000468839 AHDC1Q5TGY3 1603 aaPredicted RBP19.64■□□□□ 0.73
CRAMP1-206ENST00000468839 RCAN3Q9UKA8 241 aa19.63■□□□□ 0.73
CRAMP1-206ENST00000468839 FAM208AQ9UK61 1670 aaKnown RBP19.62■□□□□ 0.73
CRAMP1-206ENST00000468839 CPDO75976 1380 aa19.61■□□□□ 0.73
CRAMP1-206ENST00000468839 NCAPD2Q15021 1401 aa19.6■□□□□ 0.73
CRAMP1-206ENST00000468839 LMOD3Q0VAK6 560 aa19.6■□□□□ 0.73
CRAMP1-206ENST00000468839 FKBP8Q14318 412 aa19.6■□□□□ 0.73
CRAMP1-206ENST00000468839 ZC3H6P61129 1189 aaKnown RBP19.59■□□□□ 0.73
CRAMP1-206ENST00000468839 LTV1Q96GA3 475 aaPredicted RBP19.59■□□□□ 0.73
CRAMP1-206ENST00000468839 LMO7Q8WWI1 1683 aa19.59■□□□□ 0.73
CRAMP1-206ENST00000468839 ZBTB7CA1YPR0 619 aa19.58■□□□□ 0.72
CRAMP1-206ENST00000468839 ERICH6BQ5W0A0 696 aa19.58■□□□□ 0.72
CRAMP1-206ENST00000468839 AEBP2Q6ZN18 517 aaPredicted RBP19.58■□□□□ 0.72
CRAMP1-206ENST00000468839 MYH16Q9H6N6 1097 aa19.58■□□□□ 0.72
CRAMP1-206ENST00000468839 CALD1Q05682 793 aaKnown RBP19.57■□□□□ 0.72
CRAMP1-206ENST00000468839 CABLES1Q8TDN4 633 aa19.57■□□□□ 0.72
CRAMP1-206ENST00000468839 AXIN2Q9Y2T1 843 aa19.57■□□□□ 0.72
CRAMP1-206ENST00000468839 VIRMAQ69YN4 1812 aaKnown RBP19.56■□□□□ 0.72
CRAMP1-206ENST00000468839 COL22A1Q8NFW1 1626 aaPredicted RBP19.56■□□□□ 0.72
CRAMP1-206ENST00000468839 PLEKHG5O94827 1062 aa19.56■□□□□ 0.72
CRAMP1-206ENST00000468839 NBPF6Q5VWK0 638 aa19.56■□□□□ 0.72
CRAMP1-206ENST00000468839 ANKRD24Q8TF21 1146 aa19.56■□□□□ 0.72
CRAMP1-206ENST00000468839 NBPF4Q96M43 638 aa19.56■□□□□ 0.72
CRAMP1-206ENST00000468839 PHLPP1O60346 1717 aa19.56■□□□□ 0.72
CRAMP1-206ENST00000468839 LRRC59Q96AG4 307 aaKnown RBP19.55■□□□□ 0.72
CRAMP1-206ENST00000468839 GAS2L2Q8NHY3 880 aa19.54■□□□□ 0.72
CRAMP1-206ENST00000468839 TOM1O60784 492 aa19.53■□□□□ 0.72
CRAMP1-206ENST00000468839 MTHFSDQ2M296 383 aaKnown RBP19.53■□□□□ 0.72
CRAMP1-206ENST00000468839 KIAA0232Q92628 1395 aa19.53■□□□□ 0.72
CRAMP1-206ENST00000468839 ERBB3P21860 1342 aa19.52■□□□□ 0.72
CRAMP1-206ENST00000468839 HTATSF1O43719 755 aaKnown RBP19.52■□□□□ 0.72
CRAMP1-206ENST00000468839 RRP1P56182 461 aaKnown RBP19.52■□□□□ 0.72
CRAMP1-206ENST00000468839 CT47B1P0C2W7 299 aaPredicted RBP19.51■□□□□ 0.71
CRAMP1-206ENST00000468839 ZNF853P0CG23 659 aa19.51■□□□□ 0.71
CRAMP1-206ENST00000468839 COL16A1Q07092 1604 aaPredicted RBP19.51■□□□□ 0.71
CRAMP1-206ENST00000468839 GNAI1P63096 354 aa19.5■□□□□ 0.71
CRAMP1-206ENST00000468839 IFT57Q9NWB7 429 aa19.5■□□□□ 0.71
CRAMP1-206ENST00000468839 FANCIQ9NVI1 1328 aa19.5■□□□□ 0.71
CRAMP1-206ENST00000468839 USHBP1Q8N6Y0 703 aa19.49■□□□□ 0.71
CRAMP1-206ENST00000468839 LRRC37A3O60309 1634 aa19.48■□□□□ 0.71
CRAMP1-206ENST00000468839 CHRNA2Q15822 529 aa19.48■□□□□ 0.71
CRAMP1-206ENST00000468839 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
CRAMP1-206ENST00000468839 FAM83GA6ND36 823 aa19.47■□□□□ 0.71
CRAMP1-206ENST00000468839 CFAP44Q96MT7 982 aa19.47■□□□□ 0.71
CRAMP1-206ENST00000468839 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
CRAMP1-206ENST00000468839 IRX6P78412 446 aaPredicted RBP19.46■□□□□ 0.71
CRAMP1-206ENST00000468839 TSR2Q969E8 191 aaKnown RBP19.46■□□□□ 0.71
CRAMP1-206ENST00000468839 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
CRAMP1-206ENST00000468839 PRDM11Q9NQV5 511 aa19.46■□□□□ 0.71
CRAMP1-206ENST00000468839 COL14A1Q05707 1796 aaKnown RBP19.46■□□□□ 0.71
CRAMP1-206ENST00000468839 GNAT3A8MTJ3 354 aa19.45■□□□□ 0.7
CRAMP1-206ENST00000468839 EXOSC9Q06265 439 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms