RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
MSH5-213ENST00000468136 PDE3AQ14432 1141 aa13.2□□□□□ -0.3
MSH5-213ENST00000468136 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
MSH5-213ENST00000468136 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
MSH5-213ENST00000468136 C1orf167Q5SNV9 1468 aa13.2□□□□□ -0.3
MSH5-213ENST00000468136 MSH6P52701 1360 aa13.2□□□□□ -0.3
MSH5-213ENST00000468136 LMTK3Q96Q04 1460 aa13.19□□□□□ -0.3
MSH5-213ENST00000468136 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
MSH5-213ENST00000468136 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
MSH5-213ENST00000468136 CCDC136Q96JN2 1154 aa13.19□□□□□ -0.3
MSH5-213ENST00000468136 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
MSH5-213ENST00000468136 TMEM94Q12767 1356 aa13.19□□□□□ -0.3
MSH5-213ENST00000468136 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
MSH5-213ENST00000468136 GNAI1P63096 354 aa13.18□□□□□ -0.3
MSH5-213ENST00000468136 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
MSH5-213ENST00000468136 IFT57Q9NWB7 429 aa13.18□□□□□ -0.3
MSH5-213ENST00000468136 KDRP35968 1356 aa13.18□□□□□ -0.3
MSH5-213ENST00000468136 HTATSF1O43719 755 aaKnown RBP13.17□□□□□ -0.3
MSH5-213ENST00000468136 IGSF1Q8N6C5 1336 aa13.16□□□□□ -0.3
MSH5-213ENST00000468136 FBLN1P23142 703 aa13.16□□□□□ -0.3
MSH5-213ENST00000468136 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
MSH5-213ENST00000468136 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
MSH5-213ENST00000468136 IP6K1Q92551 441 aa13.16□□□□□ -0.3
MSH5-213ENST00000468136 PHRF1Q9P1Y6 1649 aaKnown RBP13.16□□□□□ -0.3
MSH5-213ENST00000468136 NPHP3Q7Z494 1330 aa13.15□□□□□ -0.3
MSH5-213ENST00000468136 HMOX1P09601 288 aa13.15□□□□□ -0.3
MSH5-213ENST00000468136 HOXC9P31274 260 aa13.15□□□□□ -0.3
MSH5-213ENST00000468136 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
MSH5-213ENST00000468136 ALDH1L2Q3SY69 923 aa13.15□□□□□ -0.3
MSH5-213ENST00000468136 HSP90AB2PQ58FF8 381 aa13.15□□□□□ -0.3
MSH5-213ENST00000468136 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.3
MSH5-213ENST00000468136 USP19O94966 1318 aa13.14□□□□□ -0.31
MSH5-213ENST00000468136 FANCIQ9NVI1 1328 aa13.14□□□□□ -0.31
MSH5-213ENST00000468136 SLIT3O75094 1523 aa13.14□□□□□ -0.31
MSH5-213ENST00000468136 BRPF1P55201 1214 aaPredicted RBP13.14□□□□□ -0.31
MSH5-213ENST00000468136 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
MSH5-213ENST00000468136 PLEKHG2Q9H7P9 1386 aa13.14□□□□□ -0.31
MSH5-213ENST00000468136 PEAK1Q9H792 1746 aa13.13□□□□□ -0.31
MSH5-213ENST00000468136 PHACTR3Q96KR7 559 aa13.13□□□□□ -0.31
MSH5-213ENST00000468136 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
MSH5-213ENST00000468136 ORAI2Q96SN7 254 aa13.13□□□□□ -0.31
MSH5-213ENST00000468136 NFAT5O94916 1531 aa13.13□□□□□ -0.31
MSH5-213ENST00000468136 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
MSH5-213ENST00000468136 FOXO3O43524 673 aa13.12□□□□□ -0.31
MSH5-213ENST00000468136 ZNF853P0CG23 659 aa13.12□□□□□ -0.31
MSH5-213ENST00000468136 CANXP27824 592 aaKnown RBP13.12□□□□□ -0.31
MSH5-213ENST00000468136 HSPA2P54652 639 aa13.12□□□□□ -0.31
MSH5-213ENST00000468136 BABAM1Q9NWV8 329 aa13.12□□□□□ -0.31
MSH5-213ENST00000468136 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
MSH5-213ENST00000468136 MARF1Q9Y4F3 1742 aaKnown RBP13.11□□□□□ -0.31
MSH5-213ENST00000468136 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
MSH5-213ENST00000468136 EXOC6Q8TAG9 804 aa13.11□□□□□ -0.31
MSH5-213ENST00000468136 CHMP4BQ9H444 224 aaKnown RBP13.11□□□□□ -0.31
MSH5-213ENST00000468136 ABCC6O95255 1503 aa13.11□□□□□ -0.31
MSH5-213ENST00000468136 SOS1Q07889 1333 aaPredicted RBP13.11□□□□□ -0.31
MSH5-213ENST00000468136 GCP02774 474 aa13.1□□□□□ -0.31
MSH5-213ENST00000468136 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
MSH5-213ENST00000468136 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
MSH5-213ENST00000468136 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
MSH5-213ENST00000468136 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
MSH5-213ENST00000468136 EYA1Q99502 592 aa13.1□□□□□ -0.31
MSH5-213ENST00000468136 TRPM3Q9HCF6 1732 aaPredicted RBP13.1□□□□□ -0.31
MSH5-213ENST00000468136 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
MSH5-213ENST00000468136 EXOSC9Q06265 439 aaKnown RBP13.09□□□□□ -0.31
MSH5-213ENST00000468136 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
MSH5-213ENST00000468136 CHMP4AQ9BY43 222 aa13.09□□□□□ -0.31
MSH5-213ENST00000468136 STRCP1A6NGW2 1772 aa13.08□□□□□ -0.32
MSH5-213ENST00000468136 SOX12O15370 315 aa13.08□□□□□ -0.32
MSH5-213ENST00000468136 PLIN1O60240 522 aa13.08□□□□□ -0.32
MSH5-213ENST00000468136 BCAR3O75815 825 aa13.08□□□□□ -0.32
MSH5-213ENST00000468136 ARHGAP45Q92619 1136 aa13.08□□□□□ -0.32
MSH5-213ENST00000468136 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
MSH5-213ENST00000468136 CENPQQ7L2Z9 268 aaPredicted RBP13.07□□□□□ -0.32
MSH5-213ENST00000468136 KIAA0232Q92628 1395 aa13.07□□□□□ -0.32
MSH5-213ENST00000468136 NCAPD2Q15021 1401 aa13.06□□□□□ -0.32
MSH5-213ENST00000468136 TNS3Q68CZ2 1445 aa13.06□□□□□ -0.32
MSH5-213ENST00000468136 NUTM2GQ5VZR2 741 aa13.06□□□□□ -0.32
MSH5-213ENST00000468136 AEBP1Q8IUX7 1158 aa13.06□□□□□ -0.32
MSH5-213ENST00000468136 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
MSH5-213ENST00000468136 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
MSH5-213ENST00000468136 CHL1O00533 1208 aa13.05□□□□□ -0.32
MSH5-213ENST00000468136 TSR2Q969E8 191 aaKnown RBP13.05□□□□□ -0.32
MSH5-213ENST00000468136 MED1Q15648 1581 aaPredicted RBP13.04□□□□□ -0.32
MSH5-213ENST00000468136 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
MSH5-213ENST00000468136 FTSJ3Q8IY81 847 aaKnown RBP13.04□□□□□ -0.32
MSH5-213ENST00000468136 DZIP1LQ8IYY4 767 aaKnown RBP13.04□□□□□ -0.32
MSH5-213ENST00000468136 MBIPQ9NS73 344 aa13.04□□□□□ -0.32
MSH5-213ENST00000468136 SPATA31A3Q5VYP0 1347 aa13.04□□□□□ -0.32
MSH5-213ENST00000468136 CPDO75976 1380 aa13.04□□□□□ -0.32
MSH5-213ENST00000468136 LTN1O94822 1766 aa13.04□□□□□ -0.32
MSH5-213ENST00000468136 VAMP4O75379 141 aa13.03□□□□□ -0.32
MSH5-213ENST00000468136 MTHFSDQ2M296 383 aaKnown RBP13.03□□□□□ -0.32
MSH5-213ENST00000468136 PLEKHO1Q53GL0 409 aaPredicted RBP13.03□□□□□ -0.32
MSH5-213ENST00000468136 ATF7IPQ6VMQ6 1270 aa13.03□□□□□ -0.32
MSH5-213ENST00000468136 SLAIN2Q9P270 581 aa13.03□□□□□ -0.32
MSH5-213ENST00000468136 DLG5Q8TDM6 1919 aa13.03□□□□□ -0.32
MSH5-213ENST00000468136 PXDNQ92626 1479 aa13.03□□□□□ -0.32
MSH5-213ENST00000468136 TCERG1O14776 1098 aaKnown RBP13.02□□□□□ -0.33
MSH5-213ENST00000468136 TWISTNBQ3B726 338 aaPredicted RBP13.02□□□□□ -0.33
MSH5-213ENST00000468136 C20orf194Q5TEA3 1177 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms