RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 XRN1Q8IZH2 1706 aaKnown RBP22.57■■□□□ 1.2
NELFA-213ENST00000467661 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
NELFA-213ENST00000467661 FAM161AQ3B820 660 aa22.57■■□□□ 1.2
NELFA-213ENST00000467661 DZIP1LQ8IYY4 767 aaKnown RBP22.57■■□□□ 1.2
NELFA-213ENST00000467661 OVOS2A0A0J9YW53 1432 aa22.56■■□□□ 1.2
NELFA-213ENST00000467661 OVOS2Q6IE36 1432 aa22.56■■□□□ 1.2
NELFA-213ENST00000467661 IGHDP01880 384 aa22.56■■□□□ 1.2
NELFA-213ENST00000467661 HMOX1P09601 288 aa22.56■■□□□ 1.2
NELFA-213ENST00000467661 RLBP1P12271 317 aa22.56■■□□□ 1.2
NELFA-213ENST00000467661 MVPQ14764 893 aaKnown RBP22.56■■□□□ 1.2
NELFA-213ENST00000467661 ZNF428Q96B54 188 aa22.56■■□□□ 1.2
NELFA-213ENST00000467661 KIF16BQ96L93 1317 aa22.55■■□□□ 1.2
NELFA-213ENST00000467661 RRS1Q15050 365 aaKnown RBP22.54■■□□□ 1.2
NELFA-213ENST00000467661 ALDH1L2Q3SY69 923 aa22.54■■□□□ 1.2
NELFA-213ENST00000467661 NPM2Q86SE8 214 aaKnown RBP22.54■■□□□ 1.2
NELFA-213ENST00000467661 TTC21AQ8NDW8 1320 aa22.53■■□□□ 1.2
NELFA-213ENST00000467661 SSH1Q8WYL5 1049 aa22.53■■□□□ 1.2
NELFA-213ENST00000467661 CHD2O14647 1828 aaKnown RBP22.52■■□□□ 1.2
NELFA-213ENST00000467661 PIK3R4Q99570 1358 aa22.52■■□□□ 1.2
NELFA-213ENST00000467661 RGS3P49796 1198 aa22.52■■□□□ 1.2
NELFA-213ENST00000467661 PHACTR3Q96KR7 559 aa22.52■■□□□ 1.2
NELFA-213ENST00000467661 DLG5Q8TDM6 1919 aa22.51■■□□□ 1.19
NELFA-213ENST00000467661 VIRMAQ69YN4 1812 aaKnown RBP22.51■■□□□ 1.19
NELFA-213ENST00000467661 IPO8O15397 1037 aaKnown RBP22.51■■□□□ 1.19
NELFA-213ENST00000467661 GNAI1P63096 354 aa22.51■■□□□ 1.19
NELFA-213ENST00000467661 TNNQ9UQP3 1299 aa22.51■■□□□ 1.19
NELFA-213ENST00000467661 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
NELFA-213ENST00000467661 ATF7IPQ6VMQ6 1270 aa22.51■■□□□ 1.19
NELFA-213ENST00000467661 RWDD1Q9H446 243 aaPredicted RBP22.51■■□□□ 1.19
NELFA-213ENST00000467661 IFT57Q9NWB7 429 aa22.51■■□□□ 1.19
NELFA-213ENST00000467661 SSH2Q76I76 1423 aa22.51■■□□□ 1.19
NELFA-213ENST00000467661 DDRGK1Q96HY6 314 aa22.5■■□□□ 1.19
NELFA-213ENST00000467661 DDX19BQ9UMR2 479 aa22.49■■□□□ 1.19
NELFA-213ENST00000467661 ANKARQ7Z5J8 1434 aa22.49■■□□□ 1.19
NELFA-213ENST00000467661 NUTM2FA1L443 756 aa22.48■■□□□ 1.19
NELFA-213ENST00000467661 TRIM27P14373 513 aa22.48■■□□□ 1.19
NELFA-213ENST00000467661 C8orf34Q49A92 452 aa22.48■■□□□ 1.19
NELFA-213ENST00000467661 BRPF1P55201 1214 aaPredicted RBP22.47■■□□□ 1.19
NELFA-213ENST00000467661 NOB1Q9ULX3 412 aaKnown RBP22.47■■□□□ 1.19
NELFA-213ENST00000467661 PCDHB15Q9Y5E8 787 aa22.47■■□□□ 1.19
NELFA-213ENST00000467661 STRCP1A6NGW2 1772 aa22.47■■□□□ 1.19
NELFA-213ENST00000467661 PAK3O75914 559 aaPredicted RBP22.46■■□□□ 1.19
NELFA-213ENST00000467661 LAS1LQ9Y4W2 734 aaKnown RBP22.46■■□□□ 1.19
NELFA-213ENST00000467661 FMN2Q9NZ56 1722 aa22.46■■□□□ 1.19
NELFA-213ENST00000467661 RGPD8O14715 1765 aaPredicted RBP22.45■■□□□ 1.18
NELFA-213ENST00000467661 RGPD1P0DJD0 1748 aa22.45■■□□□ 1.18
NELFA-213ENST00000467661 PEAK1Q9H792 1746 aa22.45■■□□□ 1.18
NELFA-213ENST00000467661 EIF4A2Q14240 407 aaKnown RBP22.45■■□□□ 1.18
NELFA-213ENST00000467661 ZNF853P0CG23 659 aa22.44■■□□□ 1.18
NELFA-213ENST00000467661 ITPRIPQ8IWB1 547 aa22.43■■□□□ 1.18
NELFA-213ENST00000467661 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
NELFA-213ENST00000467661 NWD1Q149M9 1564 aa22.43■■□□□ 1.18
NELFA-213ENST00000467661 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
NELFA-213ENST00000467661 CHMP4BQ9H444 224 aaKnown RBP22.4■■□□□ 1.18
NELFA-213ENST00000467661 ARHGEF10O15013 1369 aa22.4■■□□□ 1.18
NELFA-213ENST00000467661 PIK3C2AO00443 1686 aa22.4■■□□□ 1.18
NELFA-213ENST00000467661 SULT6B1Q6IMI4 303 aa22.4■■□□□ 1.18
NELFA-213ENST00000467661 ARHGAP45Q92619 1136 aa22.4■■□□□ 1.18
NELFA-213ENST00000467661 THUMPD2Q9BTF0 503 aaKnown RBP22.4■■□□□ 1.18
NELFA-213ENST00000467661 MBIPQ9NS73 344 aa22.4■■□□□ 1.18
NELFA-213ENST00000467661 USP54Q70EL1 1684 aa22.39■■□□□ 1.18
NELFA-213ENST00000467661 SBNO1A3KN83 1393 aa22.39■■□□□ 1.18
NELFA-213ENST00000467661 VAMP4O75379 141 aa22.39■■□□□ 1.17
NELFA-213ENST00000467661 HDAC1Q13547 482 aaPredicted RBP22.39■■□□□ 1.17
NELFA-213ENST00000467661 TMEM57Q8N5G2 664 aa22.39■■□□□ 1.17
NELFA-213ENST00000467661 FLT4P35916 1363 aa22.38■■□□□ 1.17
NELFA-213ENST00000467661 KCNA6P17658 529 aa22.38■■□□□ 1.17
NELFA-213ENST00000467661 ZNF335Q9H4Z2 1342 aaPredicted RBP22.38■■□□□ 1.17
NELFA-213ENST00000467661 PDZRN3Q9UPQ7 1066 aa22.37■■□□□ 1.17
NELFA-213ENST00000467661 HAP1P54257 671 aaPredicted RBP22.37■■□□□ 1.17
NELFA-213ENST00000467661 MRPL50Q8N5N7 158 aaKnown RBP22.36■■□□□ 1.17
NELFA-213ENST00000467661 TWISTNBQ3B726 338 aaPredicted RBP22.35■■□□□ 1.17
NELFA-213ENST00000467661 HSP90AB2PQ58FF8 381 aa22.35■■□□□ 1.17
NELFA-213ENST00000467661 AEBP1Q8IUX7 1158 aa22.35■■□□□ 1.17
NELFA-213ENST00000467661 MAP3K19Q56UN5 1328 aa22.35■■□□□ 1.17
NELFA-213ENST00000467661 ZBTB40Q9NUA8 1239 aa22.34■■□□□ 1.17
NELFA-213ENST00000467661 KIF24Q5T7B8 1368 aa22.34■■□□□ 1.17
NELFA-213ENST00000467661 XIRP1Q702N8 1843 aaKnown RBP22.32■■□□□ 1.16
NELFA-213ENST00000467661 LTBP4Q8N2S1 1624 aa22.32■■□□□ 1.16
NELFA-213ENST00000467661 FAM83GA6ND36 823 aa22.31■■□□□ 1.16
NELFA-213ENST00000467661 TSPYL6Q8N831 410 aa22.31■■□□□ 1.16
NELFA-213ENST00000467661 SOX12O15370 315 aa22.31■■□□□ 1.16
NELFA-213ENST00000467661 AMPHP49418 695 aa22.31■■□□□ 1.16
NELFA-213ENST00000467661 MARF1Q9Y4F3 1742 aaKnown RBP22.3■■□□□ 1.16
NELFA-213ENST00000467661 DAXXQ9UER7 740 aaPredicted RBP22.3■■□□□ 1.16
NELFA-213ENST00000467661 KDRP35968 1356 aa22.3■■□□□ 1.16
NELFA-213ENST00000467661 API5Q9BZZ5 524 aaKnown RBP22.29■■□□□ 1.16
NELFA-213ENST00000467661 NLRP6P59044 892 aa22.28■■□□□ 1.16
NELFA-213ENST00000467661 DCTN1Q14203 1278 aa22.28■■□□□ 1.16
NELFA-213ENST00000467661 SMC5Q8IY18 1101 aa22.28■■□□□ 1.16
NELFA-213ENST00000467661 C8orf58Q8NAV2 365 aa22.28■■□□□ 1.16
NELFA-213ENST00000467661 ABCC4O15439 1325 aa22.28■■□□□ 1.16
NELFA-213ENST00000467661 KIAA0232Q92628 1395 aa22.27■■□□□ 1.16
NELFA-213ENST00000467661 ELL2O00472 640 aaPredicted RBP22.26■■□□□ 1.15
NELFA-213ENST00000467661 CHL1O00533 1208 aa22.26■■□□□ 1.15
NELFA-213ENST00000467661 IGSF1Q8N6C5 1336 aa22.26■■□□□ 1.15
NELFA-213ENST00000467661 UPF2Q9HAU5 1272 aaKnown RBP22.25■■□□□ 1.15
NELFA-213ENST00000467661 PROSER2Q86WR7 435 aaPredicted RBP22.24■■□□□ 1.15
NELFA-213ENST00000467661 GAS2L2Q8NHY3 880 aa22.24■■□□□ 1.15
NELFA-213ENST00000467661 PHF8Q9UPP1 1060 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms