RNA–Protein interactions for RNA: ENST00000467411.5

CDCA7-206, Transcript of cell division cycle associated 7, humanhuman

TSL 1 (best)

Gene CDCA7, Length 3,176 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-206ENST00000467411 RRS1Q15050 365 aaKnown RBP13.38□□□□□ -0.27
CDCA7-206ENST00000467411 NHSL1Q5SYE7 1610 aa13.38□□□□□ -0.27
CDCA7-206ENST00000467411 FAM208AQ9UK61 1670 aaKnown RBP13.37□□□□□ -0.27
CDCA7-206ENST00000467411 SENP3-EIF4A1A0A087X0R7 540 aa13.37□□□□□ -0.27
CDCA7-206ENST00000467411 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
CDCA7-206ENST00000467411 IGSF1Q8N6C5 1336 aa13.37□□□□□ -0.27
CDCA7-206ENST00000467411 NFE2L2Q16236 605 aa13.36□□□□□ -0.27
CDCA7-206ENST00000467411 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
CDCA7-206ENST00000467411 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
CDCA7-206ENST00000467411 MAPK8IP3Q9UPT6 1336 aa13.35□□□□□ -0.27
CDCA7-206ENST00000467411 ADAMTS7Q9UKP4 1686 aa13.35□□□□□ -0.27
CDCA7-206ENST00000467411 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
CDCA7-206ENST00000467411 MYH16Q9H6N6 1097 aa13.34□□□□□ -0.27
CDCA7-206ENST00000467411 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
CDCA7-206ENST00000467411 ZNF853P0CG23 659 aa13.34□□□□□ -0.27
CDCA7-206ENST00000467411 RGPD2P0DJD1 1756 aa13.34□□□□□ -0.27
CDCA7-206ENST00000467411 HOXC9P31274 260 aa13.33□□□□□ -0.28
CDCA7-206ENST00000467411 ESCO1Q5FWF5 840 aa13.33□□□□□ -0.28
CDCA7-206ENST00000467411 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
CDCA7-206ENST00000467411 KCNH5Q8NCM2 988 aa13.33□□□□□ -0.28
CDCA7-206ENST00000467411 ORAI2Q96SN7 254 aa13.33□□□□□ -0.28
CDCA7-206ENST00000467411 RRP7AQ9Y3A4 280 aaKnown RBP13.32□□□□□ -0.28
CDCA7-206ENST00000467411 RIPK4P57078 832 aa13.32□□□□□ -0.28
CDCA7-206ENST00000467411 NLRP6P59044 892 aa13.32□□□□□ -0.28
CDCA7-206ENST00000467411 HSP90AB2PQ58FF8 381 aa13.32□□□□□ -0.28
CDCA7-206ENST00000467411 HSPA2P54652 639 aa13.32□□□□□ -0.28
CDCA7-206ENST00000467411 ABTB2Q8N961 1025 aa13.32□□□□□ -0.28
CDCA7-206ENST00000467411 MSH6P52701 1360 aa13.31□□□□□ -0.28
CDCA7-206ENST00000467411 CADPS2Q86UW7 1296 aa13.31□□□□□ -0.28
CDCA7-206ENST00000467411 RGPD5Q99666 1765 aa13.31□□□□□ -0.28
CDCA7-206ENST00000467411 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
CDCA7-206ENST00000467411 VIRMAQ69YN4 1812 aaKnown RBP13.31□□□□□ -0.28
CDCA7-206ENST00000467411 BRPF1P55201 1214 aaPredicted RBP13.31□□□□□ -0.28
CDCA7-206ENST00000467411 IRX6P78412 446 aaPredicted RBP13.31□□□□□ -0.28
CDCA7-206ENST00000467411 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
CDCA7-206ENST00000467411 TNS3Q68CZ2 1445 aa13.31□□□□□ -0.28
CDCA7-206ENST00000467411 IP6K1Q92551 441 aa13.3□□□□□ -0.28
CDCA7-206ENST00000467411 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
CDCA7-206ENST00000467411 PSME1Q06323 249 aa13.3□□□□□ -0.28
CDCA7-206ENST00000467411 LMOD3Q0VAK6 560 aa13.3□□□□□ -0.28
CDCA7-206ENST00000467411 CALD1Q05682 793 aaKnown RBP13.29□□□□□ -0.28
CDCA7-206ENST00000467411 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
CDCA7-206ENST00000467411 CRB1P82279 1406 aa13.29□□□□□ -0.28
CDCA7-206ENST00000467411 PPM1GO15355 546 aaPredicted RBP13.29□□□□□ -0.28
CDCA7-206ENST00000467411 SIPA1L3O60292 1781 aaPredicted RBP13.28□□□□□ -0.28
CDCA7-206ENST00000467411 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
CDCA7-206ENST00000467411 HMOX1P09601 288 aa13.28□□□□□ -0.28
CDCA7-206ENST00000467411 PDE3AQ14432 1141 aa13.28□□□□□ -0.28
CDCA7-206ENST00000467411 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.28□□□□□ -0.28
CDCA7-206ENST00000467411 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
CDCA7-206ENST00000467411 KRT28Q7Z3Y7 464 aa13.28□□□□□ -0.28
CDCA7-206ENST00000467411 ARHGEF25Q86VW2 580 aa13.28□□□□□ -0.28
CDCA7-206ENST00000467411 HTATSF1O43719 755 aaKnown RBP13.27□□□□□ -0.28
CDCA7-206ENST00000467411 ATF3P18847 181 aa13.27□□□□□ -0.28
CDCA7-206ENST00000467411 EYA1Q99502 592 aa13.27□□□□□ -0.28
CDCA7-206ENST00000467411 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.29
CDCA7-206ENST00000467411 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
CDCA7-206ENST00000467411 CPDO75976 1380 aa13.26□□□□□ -0.29
CDCA7-206ENST00000467411 PKD1L3Q7Z443 1732 aa13.26□□□□□ -0.29
CDCA7-206ENST00000467411 SULT6B1Q6IMI4 303 aa13.26□□□□□ -0.29
CDCA7-206ENST00000467411 AEBP1Q8IUX7 1158 aa13.26□□□□□ -0.29
CDCA7-206ENST00000467411 OVOS2A0A0G2JMS6 1433 aa13.26□□□□□ -0.29
CDCA7-206ENST00000467411 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
CDCA7-206ENST00000467411 EXOC6Q8TAG9 804 aa13.26□□□□□ -0.29
CDCA7-206ENST00000467411 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
CDCA7-206ENST00000467411 NEFMP07197 916 aa13.25□□□□□ -0.29
CDCA7-206ENST00000467411 PELP1Q8IZL8 1130 aaKnown RBP13.25□□□□□ -0.29
CDCA7-206ENST00000467411 CFAP44Q96MT7 982 aa13.25□□□□□ -0.29
CDCA7-206ENST00000467411 N4BP2Q86UW6 1770 aaPredicted RBP13.25□□□□□ -0.29
CDCA7-206ENST00000467411 AMPHP49418 695 aa13.25□□□□□ -0.29
CDCA7-206ENST00000467411 AAMPQ13685 434 aa13.25□□□□□ -0.29
CDCA7-206ENST00000467411 ALDH1L2Q3SY69 923 aa13.25□□□□□ -0.29
CDCA7-206ENST00000467411 C14orf37Q86TY3 774 aa13.25□□□□□ -0.29
CDCA7-206ENST00000467411 AHDC1Q5TGY3 1603 aaPredicted RBP13.25□□□□□ -0.29
CDCA7-206ENST00000467411 BCAR3O75815 825 aa13.24□□□□□ -0.29
CDCA7-206ENST00000467411 FOXO3O43524 673 aa13.24□□□□□ -0.29
CDCA7-206ENST00000467411 GCP02774 474 aa13.24□□□□□ -0.29
CDCA7-206ENST00000467411 GNAI1P63096 354 aa13.24□□□□□ -0.29
CDCA7-206ENST00000467411 C20orf194Q5TEA3 1177 aa13.24□□□□□ -0.29
CDCA7-206ENST00000467411 SOS2Q07890 1332 aaPredicted RBP13.24□□□□□ -0.29
CDCA7-206ENST00000467411 SPATA31A3Q5VYP0 1347 aa13.24□□□□□ -0.29
CDCA7-206ENST00000467411 KIAA0232Q92628 1395 aa13.24□□□□□ -0.29
CDCA7-206ENST00000467411 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
CDCA7-206ENST00000467411 PLIN1O60240 522 aa13.23□□□□□ -0.29
CDCA7-206ENST00000467411 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
CDCA7-206ENST00000467411 CRBNQ96SW2 442 aa13.23□□□□□ -0.29
CDCA7-206ENST00000467411 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
CDCA7-206ENST00000467411 BRINP3Q76B58 766 aa13.22□□□□□ -0.29
CDCA7-206ENST00000467411 KDM2BQ8NHM5 1336 aa13.22□□□□□ -0.29
CDCA7-206ENST00000467411 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
CDCA7-206ENST00000467411 CHL1O00533 1208 aa13.21□□□□□ -0.29
CDCA7-206ENST00000467411 EXOSC9Q06265 439 aaKnown RBP13.21□□□□□ -0.29
CDCA7-206ENST00000467411 CEMIPQ8WUJ3 1361 aa13.21□□□□□ -0.3
CDCA7-206ENST00000467411 GAS2L2Q8NHY3 880 aa13.21□□□□□ -0.3
CDCA7-206ENST00000467411 TSR2Q969E8 191 aaKnown RBP13.21□□□□□ -0.3
CDCA7-206ENST00000467411 CACNA1FO60840 1977 aa13.21□□□□□ -0.3
CDCA7-206ENST00000467411 MTHFSDQ2M296 383 aaKnown RBP13.2□□□□□ -0.3
CDCA7-206ENST00000467411 NUTM2GQ5VZR2 741 aa13.2□□□□□ -0.3
CDCA7-206ENST00000467411 B4GALNT3Q6L9W6 998 aa13.2□□□□□ -0.3
CDCA7-206ENST00000467411 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms