RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 FRAT1Q92837 279 aaPredicted RBP26.42■■□□□ 1.82
CCDC78-207ENST00000466708 MAP3K19Q56UN5 1328 aa26.41■■□□□ 1.82
CCDC78-207ENST00000466708 KIF24Q5T7B8 1368 aa26.41■■□□□ 1.82
CCDC78-207ENST00000466708 TCERG1O14776 1098 aaKnown RBP26.41■■□□□ 1.82
CCDC78-207ENST00000466708 NLRP6P59044 892 aa26.41■■□□□ 1.82
CCDC78-207ENST00000466708 RGPD1P0DJD0 1748 aa26.41■■□□□ 1.82
CCDC78-207ENST00000466708 KDM2BQ8NHM5 1336 aa26.41■■□□□ 1.82
CCDC78-207ENST00000466708 HSP90AB2PQ58FF8 381 aa26.4■■□□□ 1.82
CCDC78-207ENST00000466708 MS4A1P11836 297 aa26.39■■□□□ 1.81
CCDC78-207ENST00000466708 SULT6B1Q6IMI4 303 aa26.38■■□□□ 1.81
CCDC78-207ENST00000466708 DLG5Q8TDM6 1919 aa26.38■■□□□ 1.81
CCDC78-207ENST00000466708 GNAI1P63096 354 aa26.37■■□□□ 1.81
CCDC78-207ENST00000466708 ZNF428Q96B54 188 aa26.37■■□□□ 1.81
CCDC78-207ENST00000466708 IFT57Q9NWB7 429 aa26.37■■□□□ 1.81
CCDC78-207ENST00000466708 ARHGEF10O15013 1369 aa26.37■■□□□ 1.81
CCDC78-207ENST00000466708 ABTB2Q8N961 1025 aa26.36■■□□□ 1.81
CCDC78-207ENST00000466708 PANK1Q8TE04 598 aa26.36■■□□□ 1.81
CCDC78-207ENST00000466708 MARF1Q9Y4F3 1742 aaKnown RBP26.36■■□□□ 1.81
CCDC78-207ENST00000466708 SOX12O15370 315 aa26.35■■□□□ 1.81
CCDC78-207ENST00000466708 AMPHP49418 695 aa26.35■■□□□ 1.81
CCDC78-207ENST00000466708 ZKSCAN2Q63HK3 967 aa26.35■■□□□ 1.81
CCDC78-207ENST00000466708 BCL2L13Q9BXK5 485 aa26.35■■□□□ 1.81
CCDC78-207ENST00000466708 COG6Q9Y2V7 657 aa26.35■■□□□ 1.81
CCDC78-207ENST00000466708 C14orf37Q86TY3 774 aa26.34■■□□□ 1.81
CCDC78-207ENST00000466708 SMC4Q9NTJ3 1288 aa26.34■■□□□ 1.81
CCDC78-207ENST00000466708 ZNF853P0CG23 659 aa26.33■■□□□ 1.81
CCDC78-207ENST00000466708 ALDH1L2Q3SY69 923 aa26.33■■□□□ 1.81
CCDC78-207ENST00000466708 CLUAP1Q96AJ1 413 aa26.33■■□□□ 1.81
CCDC78-207ENST00000466708 RBM33Q96EV2 1170 aaKnown RBP26.33■■□□□ 1.81
CCDC78-207ENST00000466708 PAK3O75914 559 aaPredicted RBP26.32■■□□□ 1.8
CCDC78-207ENST00000466708 AEBP1Q8IUX7 1158 aa26.32■■□□□ 1.8
CCDC78-207ENST00000466708 ESCO1Q5FWF5 840 aa26.32■■□□□ 1.8
CCDC78-207ENST00000466708 SSH1Q8WYL5 1049 aa26.32■■□□□ 1.8
CCDC78-207ENST00000466708 CFAP44Q96MT7 982 aa26.31■■□□□ 1.8
CCDC78-207ENST00000466708 LAS1LQ9Y4W2 734 aaKnown RBP26.3■■□□□ 1.8
CCDC78-207ENST00000466708 KDRP35968 1356 aa26.3■■□□□ 1.8
CCDC78-207ENST00000466708 PSME1Q06323 249 aa26.29■■□□□ 1.8
CCDC78-207ENST00000466708 PROSER2Q86WR7 435 aaPredicted RBP26.29■■□□□ 1.8
CCDC78-207ENST00000466708 KIF16BQ96L93 1317 aa26.29■■□□□ 1.8
CCDC78-207ENST00000466708 BRPF1P55201 1214 aaPredicted RBP26.28■■□□□ 1.8
CCDC78-207ENST00000466708 DZIP1LQ8IYY4 767 aaKnown RBP26.28■■□□□ 1.8
CCDC78-207ENST00000466708 THUMPD2Q9BTF0 503 aaKnown RBP26.28■■□□□ 1.8
CCDC78-207ENST00000466708 RLBP1P12271 317 aa26.28■■□□□ 1.8
CCDC78-207ENST00000466708 IGSF1Q8N6C5 1336 aa26.27■■□□□ 1.8
CCDC78-207ENST00000466708 RTL1A6NKG5 1358 aa26.27■■□□□ 1.8
CCDC78-207ENST00000466708 IPO8O15397 1037 aaKnown RBP26.26■■□□□ 1.79
CCDC78-207ENST00000466708 HOXC9P31274 260 aa26.26■■□□□ 1.79
CCDC78-207ENST00000466708 NUTM2GQ5VZR2 741 aa26.26■■□□□ 1.79
CCDC78-207ENST00000466708 FTSJ3Q8IY81 847 aaKnown RBP26.26■■□□□ 1.79
CCDC78-207ENST00000466708 MBIPQ9NS73 344 aa26.25■■□□□ 1.79
CCDC78-207ENST00000466708 MVPQ14764 893 aaKnown RBP26.25■■□□□ 1.79
CCDC78-207ENST00000466708 ATF7IPQ6VMQ6 1270 aa26.25■■□□□ 1.79
CCDC78-207ENST00000466708 EYA1Q99502 592 aa26.24■■□□□ 1.79
CCDC78-207ENST00000466708 C19orf44Q9H6X5 657 aa26.24■■□□□ 1.79
CCDC78-207ENST00000466708 TNNQ9UQP3 1299 aa26.23■■□□□ 1.79
CCDC78-207ENST00000466708 FAM83GA6ND36 823 aa26.22■■□□□ 1.79
CCDC78-207ENST00000466708 VAMP4O75379 141 aa26.22■■□□□ 1.79
CCDC78-207ENST00000466708 TRIM27P14373 513 aa26.22■■□□□ 1.79
CCDC78-207ENST00000466708 KCNH5Q8NCM2 988 aa26.22■■□□□ 1.79
CCDC78-207ENST00000466708 NOB1Q9ULX3 412 aaKnown RBP26.22■■□□□ 1.79
CCDC78-207ENST00000466708 NCOA3Q9Y6Q9 1424 aa26.21■■□□□ 1.79
CCDC78-207ENST00000466708 KIF1AQ12756 1690 aa26.2■■□□□ 1.78
CCDC78-207ENST00000466708 ORAI2Q96SN7 254 aa26.2■■□□□ 1.78
CCDC78-207ENST00000466708 NFAT5O94916 1531 aa26.2■■□□□ 1.78
CCDC78-207ENST00000466708 LTN1O94822 1766 aa26.19■■□□□ 1.78
CCDC78-207ENST00000466708 DCTN1Q14203 1278 aa26.18■■□□□ 1.78
CCDC78-207ENST00000466708 GAS2L2Q8NHY3 880 aa26.18■■□□□ 1.78
CCDC78-207ENST00000466708 HAP1P54257 671 aaPredicted RBP26.18■■□□□ 1.78
CCDC78-207ENST00000466708 DDX19BQ9UMR2 479 aa26.18■■□□□ 1.78
CCDC78-207ENST00000466708 C1orf167Q5SNV9 1468 aa26.17■■□□□ 1.78
CCDC78-207ENST00000466708 IGHDP01880 384 aa26.17■■□□□ 1.78
CCDC78-207ENST00000466708 TWISTNBQ3B726 338 aaPredicted RBP26.17■■□□□ 1.78
CCDC78-207ENST00000466708 IP6K1Q92551 441 aa26.17■■□□□ 1.78
CCDC78-207ENST00000466708 ARHGAP45Q92619 1136 aa26.17■■□□□ 1.78
CCDC78-207ENST00000466708 PHRF1Q9P1Y6 1649 aaKnown RBP26.16■■□□□ 1.78
CCDC78-207ENST00000466708 DCCP43146 1447 aa26.16■■□□□ 1.78
CCDC78-207ENST00000466708 CHL1O00533 1208 aa26.16■■□□□ 1.78
CCDC78-207ENST00000466708 FOXO3O43524 673 aa26.16■■□□□ 1.78
CCDC78-207ENST00000466708 PDE4AP27815 886 aa26.16■■□□□ 1.78
CCDC78-207ENST00000466708 MTHFSDQ2M296 383 aaKnown RBP26.16■■□□□ 1.78
CCDC78-207ENST00000466708 HTATSF1O43719 755 aaKnown RBP26.15■■□□□ 1.78
CCDC78-207ENST00000466708 TSPYL6Q8N831 410 aa26.15■■□□□ 1.78
CCDC78-207ENST00000466708 MRPL50Q8N5N7 158 aaKnown RBP26.14■■□□□ 1.78
CCDC78-207ENST00000466708 RTF1Q92541 710 aaKnown RBP26.14■■□□□ 1.78
CCDC78-207ENST00000466708 BACH2Q9BYV9 841 aa26.14■■□□□ 1.78
CCDC78-207ENST00000466708 MCM10Q7L590 875 aa26.13■■□□□ 1.77
CCDC78-207ENST00000466708 PCDHB15Q9Y5E8 787 aa26.13■■□□□ 1.77
CCDC78-207ENST00000466708 KIAA0232Q92628 1395 aa26.13■■□□□ 1.77
CCDC78-207ENST00000466708 CRB1P82279 1406 aa26.12■■□□□ 1.77
CCDC78-207ENST00000466708 C8orf58Q8NAV2 365 aa26.12■■□□□ 1.77
CCDC78-207ENST00000466708 RWDD1Q9H446 243 aaPredicted RBP26.12■■□□□ 1.77
CCDC78-207ENST00000466708 TRPM3Q9HCF6 1732 aaPredicted RBP26.12■■□□□ 1.77
CCDC78-207ENST00000466708 SLIT3O75094 1523 aa26.12■■□□□ 1.77
CCDC78-207ENST00000466708 ATF3P18847 181 aa26.11■■□□□ 1.77
CCDC78-207ENST00000466708 TMEM94Q12767 1356 aa26.11■■□□□ 1.77
CCDC78-207ENST00000466708 ITPRIPQ8IWB1 547 aa26.11■■□□□ 1.77
CCDC78-207ENST00000466708 MST1RQ04912 1400 aa26.1■■□□□ 1.77
CCDC78-207ENST00000466708 KRT28Q7Z3Y7 464 aa26.1■■□□□ 1.77
CCDC78-207ENST00000466708 STRCP1A6NGW2 1772 aa26.1■■□□□ 1.77
CCDC78-207ENST00000466708 TMEM57Q8N5G2 664 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms