RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 FTSJ3Q8IY81 847 aaKnown RBP8.73□□□□□ -1.01
CDHR3-204ENST00000466351 GGNBP2Q9H3C7 697 aa8.73□□□□□ -1.01
CDHR3-204ENST00000466351 UPF2Q9HAU5 1272 aaKnown RBP8.73□□□□□ -1.01
CDHR3-204ENST00000466351 IFT57Q9NWB7 429 aa8.73□□□□□ -1.01
CDHR3-204ENST00000466351 DAXXQ9UER7 740 aaPredicted RBP8.73□□□□□ -1.01
CDHR3-204ENST00000466351 CCDC61Q9Y6R9 512 aa8.73□□□□□ -1.01
CDHR3-204ENST00000466351 METP08581 1390 aa8.73□□□□□ -1.01
CDHR3-204ENST00000466351 USP31Q70CQ4 1352 aa8.73□□□□□ -1.01
CDHR3-204ENST00000466351 GNAI1P63096 354 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 BECN1Q14457 450 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 NFE2L2Q16236 605 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 SMC5Q8IY18 1101 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 CFAP44Q96MT7 982 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 ESF1Q9H501 851 aaKnown RBP8.72□□□□□ -1.01
CDHR3-204ENST00000466351 CABP1Q9NZU7 370 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 STK26Q9P289 416 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 POLKQ9UBT6 870 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 COG6Q9Y2V7 657 aa8.72□□□□□ -1.01
CDHR3-204ENST00000466351 PHRF1Q9P1Y6 1649 aaKnown RBP8.72□□□□□ -1.01
CDHR3-204ENST00000466351 USP6P35125 1406 aa8.71□□□□□ -1.01
CDHR3-204ENST00000466351 PTPRUQ92729 1446 aa8.71□□□□□ -1.01
CDHR3-204ENST00000466351 IGHDP01880 384 aa8.71□□□□□ -1.02
CDHR3-204ENST00000466351 TNNT2P45379 298 aaPredicted RBP8.71□□□□□ -1.02
CDHR3-204ENST00000466351 PANK1Q8TE04 598 aa8.71□□□□□ -1.02
CDHR3-204ENST00000466351 SMC4Q9NTJ3 1288 aa8.71□□□□□ -1.02
CDHR3-204ENST00000466351 TTC21BQ7Z4L5 1316 aa8.71□□□□□ -1.02
CDHR3-204ENST00000466351 TTC21AQ8NDW8 1320 aa8.71□□□□□ -1.02
CDHR3-204ENST00000466351 KIAA0232Q92628 1395 aa8.71□□□□□ -1.02
CDHR3-204ENST00000466351 SSH2Q76I76 1423 aa8.71□□□□□ -1.02
CDHR3-204ENST00000466351 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
CDHR3-204ENST00000466351 U2SURPO15042 1029 aaKnown RBP8.7□□□□□ -1.02
CDHR3-204ENST00000466351 ZNF853P0CG23 659 aa8.7□□□□□ -1.02
CDHR3-204ENST00000466351 RLBP1P12271 317 aa8.7□□□□□ -1.02
CDHR3-204ENST00000466351 TRIM27P14373 513 aa8.7□□□□□ -1.02
CDHR3-204ENST00000466351 RIPK4P57078 832 aa8.7□□□□□ -1.02
CDHR3-204ENST00000466351 RRP7AQ9Y3A4 280 aaKnown RBP8.7□□□□□ -1.02
CDHR3-204ENST00000466351 IL13P35225 146 aa8.69□□□□□ -1.02
CDHR3-204ENST00000466351 DEKP35659 375 aaKnown RBP8.69□□□□□ -1.02
CDHR3-204ENST00000466351 NUTM2DQ5VT03 806 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-204ENST00000466351 FRAT1Q92837 279 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-204ENST00000466351 COG3Q96JB2 828 aa8.69□□□□□ -1.02
CDHR3-204ENST00000466351 TBC1D32Q96NH3 1257 aa8.69□□□□□ -1.02
CDHR3-204ENST00000466351 ABCC4O15439 1325 aa8.69□□□□□ -1.02
CDHR3-204ENST00000466351 SOS1Q07889 1333 aaPredicted RBP8.69□□□□□ -1.02
CDHR3-204ENST00000466351 ARHGEF10O15013 1369 aa8.69□□□□□ -1.02
CDHR3-204ENST00000466351 PEAK1Q9H792 1746 aa8.68□□□□□ -1.02
CDHR3-204ENST00000466351 MARF1Q9Y4F3 1742 aaKnown RBP8.68□□□□□ -1.02
CDHR3-204ENST00000466351 EXOSC9Q06265 439 aaKnown RBP8.68□□□□□ -1.02
CDHR3-204ENST00000466351 SAFB2Q14151 953 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDHR3-204ENST00000466351 POLA2Q14181 598 aa8.68□□□□□ -1.02
CDHR3-204ENST00000466351 NEUROD2Q15784 382 aa8.68□□□□□ -1.02
CDHR3-204ENST00000466351 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
CDHR3-204ENST00000466351 SSH1Q8WYL5 1049 aa8.68□□□□□ -1.02
CDHR3-204ENST00000466351 NUDT16Q96DE0 195 aaKnown RBP8.68□□□□□ -1.02
CDHR3-204ENST00000466351 ZBTB40Q9NUA8 1239 aa8.68□□□□□ -1.02
CDHR3-204ENST00000466351 PCDHB15Q9Y5E8 787 aa8.68□□□□□ -1.02
CDHR3-204ENST00000466351 USP19O94966 1318 aa8.68□□□□□ -1.02
CDHR3-204ENST00000466351 PIK3C2AO00443 1686 aa8.67□□□□□ -1.02
CDHR3-204ENST00000466351 PRKAR2BP31323 418 aa8.67□□□□□ -1.02
CDHR3-204ENST00000466351 KDRP35968 1356 aa8.67□□□□□ -1.02
CDHR3-204ENST00000466351 RGS3P49796 1198 aa8.67□□□□□ -1.02
CDHR3-204ENST00000466351 GCC1Q96CN9 775 aa8.67□□□□□ -1.02
CDHR3-204ENST00000466351 ROBO2Q9HCK4 1378 aa8.67□□□□□ -1.02
CDHR3-204ENST00000466351 FAM208AQ9UK61 1670 aaKnown RBP8.67□□□□□ -1.02
CDHR3-204ENST00000466351 PDZRN3Q9UPQ7 1066 aa8.67□□□□□ -1.02
CDHR3-204ENST00000466351 CHD2O14647 1828 aaKnown RBP8.66□□□□□ -1.02
CDHR3-204ENST00000466351 LMTK3Q96Q04 1460 aa8.66□□□□□ -1.02
CDHR3-204ENST00000466351 RTL1A6NKG5 1358 aa8.66□□□□□ -1.02
CDHR3-204ENST00000466351 API5Q9BZZ5 524 aaKnown RBP8.66□□□□□ -1.02
CDHR3-204ENST00000466351 TBX22Q9Y458 520 aa8.66□□□□□ -1.02
CDHR3-204ENST00000466351 SETD1BQ9UPS6 1966 aaKnown RBP8.66□□□□□ -1.02
CDHR3-204ENST00000466351 CEP170BQ9Y4F5 1589 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-204ENST00000466351 SBNO1A3KN83 1393 aa8.65□□□□□ -1.02
CDHR3-204ENST00000466351 FLT4P35916 1363 aa8.65□□□□□ -1.02
CDHR3-204ENST00000466351 TSR2Q969E8 191 aaKnown RBP8.65□□□□□ -1.02
CDHR3-204ENST00000466351 RGPD8O14715 1765 aaPredicted RBP8.65□□□□□ -1.02
CDHR3-204ENST00000466351 PXDNLA1KZ92 1463 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 PTPRCP08575 1304 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 PRR36Q9H6K5 1346 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 ATXN8OSP0DMR3 200 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 NUCB1Q02818 461 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 NBR1Q14596 966 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 BMP2KLQ5H9B9 411 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 WAPLQ7Z5K2 1190 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 ITPRIPQ8IWB1 547 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 IL27Q8NEV9 243 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 EID1Q9Y6B2 187 aa8.64□□□□□ -1.03
CDHR3-204ENST00000466351 NCOA3Q9Y6Q9 1424 aa8.63□□□□□ -1.03
CDHR3-204ENST00000466351 HTATSF1O43719 755 aaKnown RBP8.63□□□□□ -1.03
CDHR3-204ENST00000466351 VAMP4O75379 141 aa8.63□□□□□ -1.03
CDHR3-204ENST00000466351 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
CDHR3-204ENST00000466351 BABAM1Q9NWV8 329 aa8.63□□□□□ -1.03
CDHR3-204ENST00000466351 NOB1Q9ULX3 412 aaKnown RBP8.63□□□□□ -1.03
CDHR3-204ENST00000466351 TUBGCP6Q96RT7 1819 aa8.63□□□□□ -1.03
CDHR3-204ENST00000466351 PLEKHG2Q9H7P9 1386 aa8.62□□□□□ -1.03
CDHR3-204ENST00000466351 RBM25P49756 843 aaKnown RBP8.62□□□□□ -1.03
CDHR3-204ENST00000466351 NFKBIBQ15653 356 aa8.62□□□□□ -1.03
CDHR3-204ENST00000466351 NME9Q86XW9 330 aa8.62□□□□□ -1.03
CDHR3-204ENST00000466351 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDHR3-204ENST00000466351 TMEM57Q8N5G2 664 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms