RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.08
CLCNKA-204ENST00000464764 LMBRD1Q9NUN5 540 aa15.58■□□□□ 0.08
CLCNKA-204ENST00000464764 PRPF40AO75400 957 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 MSNP26038 577 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 PRIM1P49642 420 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 C8orf58Q8NAV2 365 aa15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 TPM2P07951 284 aa15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 CABP1Q9NZU7 370 aa15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 R3HCC1Q9Y3T6 440 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 ZC3H13Q5T200 1668 aaKnown RBP15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 XPCQ01831 940 aaPredicted RBP15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 PRAM1Q96QH2 718 aa15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 MBIPQ9NS73 344 aa15.57■□□□□ 0.08
CLCNKA-204ENST00000464764 SMARCA5O60264 1052 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-204ENST00000464764 OFD1O75665 1012 aa15.56■□□□□ 0.08
CLCNKA-204ENST00000464764 USP32Q8NFA0 1604 aa15.56■□□□□ 0.08
CLCNKA-204ENST00000464764 FAM83GA6ND36 823 aa15.56■□□□□ 0.08
CLCNKA-204ENST00000464764 VGFO15240 615 aaPredicted RBP15.56■□□□□ 0.08
CLCNKA-204ENST00000464764 FCHSD2O94868 740 aa15.56■□□□□ 0.08
CLCNKA-204ENST00000464764 DCTN1Q14203 1278 aa15.56■□□□□ 0.08
CLCNKA-204ENST00000464764 PTMSP20962 102 aa15.55■□□□□ 0.08
CLCNKA-204ENST00000464764 CLEC17AQ6ZS10 378 aa15.55■□□□□ 0.08
CLCNKA-204ENST00000464764 USP26Q9BXU7 913 aa15.55■□□□□ 0.08
CLCNKA-204ENST00000464764 NSFL1CQ9UNZ2 370 aaKnown RBP15.55■□□□□ 0.08
CLCNKA-204ENST00000464764 GPT2Q8TD30 523 aa15.55■□□□□ 0.08
CLCNKA-204ENST00000464764 TERF2IPQ9NYB0 399 aa15.55■□□□□ 0.08
CLCNKA-204ENST00000464764 PUS7Q96PZ0 661 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-204ENST00000464764 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.54■□□□□ 0.08
CLCNKA-204ENST00000464764 CFAP74Q9C0B2 1584 aa15.54■□□□□ 0.08
CLCNKA-204ENST00000464764 FAM13BQ9NYF5 915 aa15.54■□□□□ 0.08
CLCNKA-204ENST00000464764 POLKQ9UBT6 870 aa15.54■□□□□ 0.08
CLCNKA-204ENST00000464764 TWISTNBQ3B726 338 aaPredicted RBP15.54■□□□□ 0.08
CLCNKA-204ENST00000464764 ZDHHC9Q9Y397 364 aa15.54■□□□□ 0.08
CLCNKA-204ENST00000464764 RPGRIP1LQ68CZ1 1315 aa15.53■□□□□ 0.08
CLCNKA-204ENST00000464764 ZNF445P59923 1031 aa15.53■□□□□ 0.08
CLCNKA-204ENST00000464764 RABEP1Q15276 862 aa15.53■□□□□ 0.08
CLCNKA-204ENST00000464764 GLI2P10070 1586 aa15.53■□□□□ 0.08
CLCNKA-204ENST00000464764 MED14O60244 1454 aa15.53■□□□□ 0.08
CLCNKA-204ENST00000464764 IDI1Q13907 227 aa15.53■□□□□ 0.08
CLCNKA-204ENST00000464764 PDCL3Q9H2J4 239 aa15.53■□□□□ 0.08
CLCNKA-204ENST00000464764 CYP2E1P05181 493 aaPredicted RBP15.52■□□□□ 0.08
CLCNKA-204ENST00000464764 BRPF1P55201 1214 aaPredicted RBP15.52■□□□□ 0.08
CLCNKA-204ENST00000464764 NFE2L2Q16236 605 aa15.52■□□□□ 0.08
CLCNKA-204ENST00000464764 KRT24Q2M2I5 525 aa15.52■□□□□ 0.08
CLCNKA-204ENST00000464764 TTC22Q5TAA0 569 aa15.52■□□□□ 0.08
CLCNKA-204ENST00000464764 EMILIN1Q9Y6C2 1016 aa15.52■□□□□ 0.08
CLCNKA-204ENST00000464764 ABCC4O15439 1325 aa15.52■□□□□ 0.08
CLCNKA-204ENST00000464764 UHRF1BP1LA0JNW5 1464 aa15.52■□□□□ 0.07
CLCNKA-204ENST00000464764 ARHGAP45Q92619 1136 aa15.52■□□□□ 0.07
CLCNKA-204ENST00000464764 SDSP20132 328 aa15.51■□□□□ 0.07
CLCNKA-204ENST00000464764 RNF214Q8ND24 703 aa15.51■□□□□ 0.07
CLCNKA-204ENST00000464764 CDK19Q9BWU1 502 aa15.51■□□□□ 0.07
CLCNKA-204ENST00000464764 PPLO60437 1756 aa15.51■□□□□ 0.07
CLCNKA-204ENST00000464764 NUCB2P80303 420 aa15.51■□□□□ 0.07
CLCNKA-204ENST00000464764 ZRANB1Q9UGI0 708 aa15.51■□□□□ 0.07
CLCNKA-204ENST00000464764 PNPLA6Q8IY17 1366 aa15.51■□□□□ 0.07
CLCNKA-204ENST00000464764 SYCE3A1L190 88 aa15.5■□□□□ 0.07
CLCNKA-204ENST00000464764 DCTPP1Q9H773 170 aa15.5■□□□□ 0.07
CLCNKA-204ENST00000464764 TMEM63CQ9P1W3 806 aa15.5■□□□□ 0.07
CLCNKA-204ENST00000464764 MPNDQ8N594 471 aa15.5■□□□□ 0.07
CLCNKA-204ENST00000464764 CD163L1Q9NR16 1453 aa15.5■□□□□ 0.07
CLCNKA-204ENST00000464764 FOXD4L6Q3SYB3 417 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 FOXD4L3Q6VB84 417 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 HDGFL2Q7Z4V5 671 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 GNAI1P63096 354 aa15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 ARAP3Q8WWN8 1544 aa15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 LRRC7Q96NW7 1537 aa15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 PIK3R4Q99570 1358 aa15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 IBTKQ9P2D0 1353 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 NOL7Q9UMY1 257 aaKnown RBP15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 CAMSAP1Q5T5Y3 1602 aa15.49■□□□□ 0.07
CLCNKA-204ENST00000464764 KIDINS220Q9ULH0 1771 aa15.48■□□□□ 0.07
CLCNKA-204ENST00000464764 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
CLCNKA-204ENST00000464764 PTCH1Q13635 1447 aa15.48■□□□□ 0.07
CLCNKA-204ENST00000464764 NOL8Q76FK4 1167 aaKnown RBP15.48■□□□□ 0.07
CLCNKA-204ENST00000464764 ZNF853P0CG23 659 aa15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 CHMP4BQ9H444 224 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 ARHGEF28Q8N1W1 1705 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 FAM135BQ49AJ0 1406 aa15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 TPRNQ4KMQ1 711 aa15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 TSHZ3Q63HK5 1081 aa15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 PDLIM2Q96JY6 352 aa15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 ABCA9Q8IUA7 1624 aa15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 INTS3Q68E01 1043 aaKnown RBP15.47■□□□□ 0.07
CLCNKA-204ENST00000464764 LMTK2Q8IWU2 1503 aa15.46■□□□□ 0.07
CLCNKA-204ENST00000464764 WAPLQ7Z5K2 1190 aa15.46■□□□□ 0.07
CLCNKA-204ENST00000464764 API5Q9BZZ5 524 aaKnown RBP15.46■□□□□ 0.07
CLCNKA-204ENST00000464764 UQCRHLA0A096LP55 91 aa15.45■□□□□ 0.06
CLCNKA-204ENST00000464764 UQCRHP07919 91 aa15.45■□□□□ 0.06
CLCNKA-204ENST00000464764 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-204ENST00000464764 RAPGEF3O95398 923 aa15.45■□□□□ 0.06
CLCNKA-204ENST00000464764 ST18O60284 1047 aa15.45■□□□□ 0.06
CLCNKA-204ENST00000464764 JARID2Q92833 1246 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-204ENST00000464764 CFAP44Q96MT7 982 aa15.45■□□□□ 0.06
CLCNKA-204ENST00000464764 IL13P35225 146 aa15.44■□□□□ 0.06
CLCNKA-204ENST00000464764 NME9Q86XW9 330 aa15.44■□□□□ 0.06
CLCNKA-204ENST00000464764 MEIS3Q99687 375 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms