RNA–Protein interactions for RNA: ENST00000464437.1

RPGR-204, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 3

Gene RPGR, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-204ENST00000464437 SPOCK2Q92563 424 aa9.42□□□□□ -0.9
RPGR-204ENST00000464437 SHPRHQ149N8 1683 aa9.42□□□□□ -0.9
RPGR-204ENST00000464437 ROCK2O75116 1388 aaKnown RBP9.41□□□□□ -0.9
RPGR-204ENST00000464437 EIF3AQ14152 1382 aaKnown RBP9.41□□□□□ -0.9
RPGR-204ENST00000464437 NPHP3Q7Z494 1330 aa9.41□□□□□ -0.9
RPGR-204ENST00000464437 KHSRPQ92945 711 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPGR-204ENST00000464437 LRRC59Q96AG4 307 aaKnown RBP9.41□□□□□ -0.9
RPGR-204ENST00000464437 KIF1AQ12756 1690 aa9.41□□□□□ -0.9
RPGR-204ENST00000464437 SPATA31A6Q5VVP1 1343 aa9.4□□□□□ -0.9
RPGR-204ENST00000464437 TULP4Q9NRJ4 1543 aa9.4□□□□□ -0.91
RPGR-204ENST00000464437 ANKARQ7Z5J8 1434 aa9.39□□□□□ -0.91
RPGR-204ENST00000464437 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
RPGR-204ENST00000464437 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
RPGR-204ENST00000464437 WASLO00401 505 aaPredicted RBP9.39□□□□□ -0.91
RPGR-204ENST00000464437 FOXO3O43524 673 aa9.39□□□□□ -0.91
RPGR-204ENST00000464437 XPCQ01831 940 aaPredicted RBP9.39□□□□□ -0.91
RPGR-204ENST00000464437 IFNLR1Q8IU57 520 aaPredicted RBP9.39□□□□□ -0.91
RPGR-204ENST00000464437 LRP6O75581 1613 aa9.38□□□□□ -0.91
RPGR-204ENST00000464437 PNPLA6Q8IY17 1366 aa9.38□□□□□ -0.91
RPGR-204ENST00000464437 CENPJQ9HC77 1338 aaPredicted RBP9.38□□□□□ -0.91
RPGR-204ENST00000464437 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
RPGR-204ENST00000464437 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
RPGR-204ENST00000464437 LSM11P83369 360 aaKnown RBP eCLIP9.38□□□□□ -0.91
RPGR-204ENST00000464437 NBPF8Q3BBV2 869 aa9.38□□□□□ -0.91
RPGR-204ENST00000464437 MEX3CQ5U5Q3 659 aaKnown RBP9.38□□□□□ -0.91
RPGR-204ENST00000464437 NUTM2AQ8IVF1 878 aaPredicted RBP9.38□□□□□ -0.91
RPGR-204ENST00000464437 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
RPGR-204ENST00000464437 PXDNQ92626 1479 aa9.38□□□□□ -0.91
RPGR-204ENST00000464437 QRICH2Q9H0J4 1663 aa9.38□□□□□ -0.91
RPGR-204ENST00000464437 RGPD8O14715 1765 aaPredicted RBP9.37□□□□□ -0.91
RPGR-204ENST00000464437 ZNF316A6NFI3 1004 aaPredicted RBP9.37□□□□□ -0.91
RPGR-204ENST00000464437 PRR36Q9H6K5 1346 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 CLSPNQ9HAW4 1339 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 ATP7BP35670 1465 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 RALGAPBQ86X10 1494 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 ILDR2Q71H61 639 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 MS4A4AQ96JQ5 239 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 ITSN1Q15811 1721 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 GPRASP1Q5JY77 1395 aa9.36□□□□□ -0.91
RPGR-204ENST00000464437 SRPK2P78362 688 aaKnown RBP9.35□□□□□ -0.91
RPGR-204ENST00000464437 PSME1Q06323 249 aa9.35□□□□□ -0.91
RPGR-204ENST00000464437 KRT28Q7Z3Y7 464 aa9.35□□□□□ -0.91
RPGR-204ENST00000464437 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
RPGR-204ENST00000464437 CDK19Q9BWU1 502 aa9.35□□□□□ -0.91
RPGR-204ENST00000464437 CARD11Q9BXL7 1154 aa9.35□□□□□ -0.91
RPGR-204ENST00000464437 COL22A1Q8NFW1 1626 aaPredicted RBP9.34□□□□□ -0.91
RPGR-204ENST00000464437 TNS3Q68CZ2 1445 aa9.34□□□□□ -0.91
RPGR-204ENST00000464437 NGDNQ8NEJ9 315 aaKnown RBP9.34□□□□□ -0.91
RPGR-204ENST00000464437 NUDT16Q96DE0 195 aaKnown RBP9.34□□□□□ -0.91
RPGR-204ENST00000464437 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
RPGR-204ENST00000464437 TOPAZ1Q8N9V7 1692 aa9.33□□□□□ -0.92
RPGR-204ENST00000464437 LMOD2Q6P5Q4 547 aa9.33□□□□□ -0.92
RPGR-204ENST00000464437 RGS17Q9UGC6 210 aaPredicted RBP9.33□□□□□ -0.92
RPGR-204ENST00000464437 SPATA31A3Q5VYP0 1347 aa9.32□□□□□ -0.92
RPGR-204ENST00000464437 ADAMTS2O95450 1211 aa9.32□□□□□ -0.92
RPGR-204ENST00000464437 C8orf37Q96NL8 207 aa9.32□□□□□ -0.92
RPGR-204ENST00000464437 SBNO1A3KN83 1393 aa9.32□□□□□ -0.92
RPGR-204ENST00000464437 EVC2Q86UK5 1308 aa9.31□□□□□ -0.92
RPGR-204ENST00000464437 HAP1P54257 671 aaPredicted RBP9.31□□□□□ -0.92
RPGR-204ENST00000464437 ZNF772Q68DY9 489 aaPredicted RBP9.31□□□□□ -0.92
RPGR-204ENST00000464437 ARHGEF10O15013 1369 aa9.31□□□□□ -0.92
RPGR-204ENST00000464437 TRPM3Q9HCF6 1732 aaPredicted RBP9.31□□□□□ -0.92
RPGR-204ENST00000464437 PPIP5K1Q6PFW1 1433 aa9.31□□□□□ -0.92
RPGR-204ENST00000464437 POTEAQ6S8J7 498 aa9.3□□□□□ -0.92
RPGR-204ENST00000464437 TIMELESSQ9UNS1 1208 aa9.3□□□□□ -0.92
RPGR-204ENST00000464437 ACEP12821 1306 aa9.3□□□□□ -0.92
RPGR-204ENST00000464437 AFF2P51816 1311 aa9.3□□□□□ -0.92
RPGR-204ENST00000464437 POLR3AO14802 1390 aaPredicted RBP9.29□□□□□ -0.92
RPGR-204ENST00000464437 SBNO2Q9Y2G9 1366 aa9.29□□□□□ -0.92
RPGR-204ENST00000464437 SOX12O15370 315 aa9.29□□□□□ -0.92
RPGR-204ENST00000464437 NGLY1Q96IV0 654 aa9.29□□□□□ -0.92
RPGR-204ENST00000464437 AXIN2Q9Y2T1 843 aa9.29□□□□□ -0.92
RPGR-204ENST00000464437 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
RPGR-204ENST00000464437 CABLES1Q8TDN4 633 aa9.28□□□□□ -0.92
RPGR-204ENST00000464437 ALS2Q96Q42 1657 aa9.28□□□□□ -0.92
RPGR-204ENST00000464437 ABCA3Q99758 1704 aa9.28□□□□□ -0.92
RPGR-204ENST00000464437 ATAD2Q6PL18 1390 aa9.27□□□□□ -0.93
RPGR-204ENST00000464437 NUDT7P0C024 238 aa9.27□□□□□ -0.93
RPGR-204ENST00000464437 POTEEQ6S8J3 1075 aa9.27□□□□□ -0.93
RPGR-204ENST00000464437 CABP1Q9NZU7 370 aa9.27□□□□□ -0.93
RPGR-204ENST00000464437 MARF1Q9Y4F3 1742 aaKnown RBP9.27□□□□□ -0.93
RPGR-204ENST00000464437 USP47Q96K76 1375 aa9.26□□□□□ -0.93
RPGR-204ENST00000464437 ST20-MTHFSA0A0A6YYL1 179 aa9.26□□□□□ -0.93
RPGR-204ENST00000464437 SOCS7O14512 581 aa9.26□□□□□ -0.93
RPGR-204ENST00000464437 USP21Q9UK80 565 aa9.26□□□□□ -0.93
RPGR-204ENST00000464437 USP6P35125 1406 aa9.25□□□□□ -0.93
RPGR-204ENST00000464437 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.25□□□□□ -0.93
RPGR-204ENST00000464437 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
RPGR-204ENST00000464437 HCSTQ9UBK5 93 aa9.25□□□□□ -0.93
RPGR-204ENST00000464437 RXRBP28702 533 aa9.24□□□□□ -0.93
RPGR-204ENST00000464437 PBX2P40425 430 aa9.24□□□□□ -0.93
RPGR-204ENST00000464437 NUTM2GQ5VZR2 741 aa9.24□□□□□ -0.93
RPGR-204ENST00000464437 FNBP4Q8N3X1 1017 aaPredicted RBP9.24□□□□□ -0.93
RPGR-204ENST00000464437 ABTB2Q8N961 1025 aa9.24□□□□□ -0.93
RPGR-204ENST00000464437 QTRT2Q9H974 415 aaKnown RBP9.24□□□□□ -0.93
RPGR-204ENST00000464437 CRYBG1Q9Y4K1 1723 aa9.24□□□□□ -0.93
RPGR-204ENST00000464437 BRD4O60885 1362 aaPredicted RBP9.24□□□□□ -0.93
RPGR-204ENST00000464437 PHRF1Q9P1Y6 1649 aaKnown RBP9.23□□□□□ -0.93
RPGR-204ENST00000464437 TMC1Q8TDI8 760 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms