RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 AMOTL2Q9Y2J4 779 aa25.99■■□□□ 1.75
TUBGCP3-204ENST00000464139 SLC4A3P48751 1232 aa25.98■■□□□ 1.75
TUBGCP3-204ENST00000464139 DDX19BQ9UMR2 479 aa25.98■■□□□ 1.75
TUBGCP3-204ENST00000464139 PLEKHG3A1L390 1219 aa25.98■■□□□ 1.75
TUBGCP3-204ENST00000464139 KIF16BQ96L93 1317 aa25.98■■□□□ 1.75
TUBGCP3-204ENST00000464139 ALDH1L2Q3SY69 923 aa25.97■■□□□ 1.75
TUBGCP3-204ENST00000464139 IPO8O15397 1037 aaKnown RBP25.96■■□□□ 1.75
TUBGCP3-204ENST00000464139 TSPYL6Q8N831 410 aa25.96■■□□□ 1.75
TUBGCP3-204ENST00000464139 TOPAZ1Q8N9V7 1692 aa25.96■■□□□ 1.75
TUBGCP3-204ENST00000464139 FAM83GA6ND36 823 aa25.95■■□□□ 1.75
TUBGCP3-204ENST00000464139 CALD1Q05682 793 aaKnown RBP25.95■■□□□ 1.75
TUBGCP3-204ENST00000464139 ELL2O00472 640 aaPredicted RBP25.95■■□□□ 1.74
TUBGCP3-204ENST00000464139 SEC24BO95487 1268 aa25.95■■□□□ 1.74
TUBGCP3-204ENST00000464139 GNAI1P63096 354 aa25.95■■□□□ 1.74
TUBGCP3-204ENST00000464139 VIRMAQ69YN4 1812 aaKnown RBP25.95■■□□□ 1.74
TUBGCP3-204ENST00000464139 NRKQ7Z2Y5 1582 aa25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 AEBP1Q8IUX7 1158 aa25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 MBIPQ9NS73 344 aa25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 IFT57Q9NWB7 429 aa25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 DLG5Q8TDM6 1919 aa25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 SOX12O15370 315 aa25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 VAMP4O75379 141 aa25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 EIF4A2Q14240 407 aaKnown RBP25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 USP6P35125 1406 aa25.94■■□□□ 1.74
TUBGCP3-204ENST00000464139 ZNF853P0CG23 659 aa25.93■■□□□ 1.74
TUBGCP3-204ENST00000464139 DCTN1Q14203 1278 aa25.93■■□□□ 1.74
TUBGCP3-204ENST00000464139 SLIT1O75093 1534 aa25.92■■□□□ 1.74
TUBGCP3-204ENST00000464139 TBX22Q9Y458 520 aa25.92■■□□□ 1.74
TUBGCP3-204ENST00000464139 ARHGAP23Q9P227 1491 aa25.92■■□□□ 1.74
TUBGCP3-204ENST00000464139 OVOS2A0A0J9YW53 1432 aa25.92■■□□□ 1.74
TUBGCP3-204ENST00000464139 OVOS2Q6IE36 1432 aa25.92■■□□□ 1.74
TUBGCP3-204ENST00000464139 SULT6B1Q6IMI4 303 aa25.91■■□□□ 1.74
TUBGCP3-204ENST00000464139 FER1L4A9Z1Z3 1794 aa25.91■■□□□ 1.74
TUBGCP3-204ENST00000464139 ZBTB40Q9NUA8 1239 aa25.9■■□□□ 1.74
TUBGCP3-204ENST00000464139 USP19O94966 1318 aa25.9■■□□□ 1.74
TUBGCP3-204ENST00000464139 LMOD3Q0VAK6 560 aa25.9■■□□□ 1.74
TUBGCP3-204ENST00000464139 HSP90AB2PQ58FF8 381 aa25.9■■□□□ 1.74
TUBGCP3-204ENST00000464139 ZNF428Q96B54 188 aa25.9■■□□□ 1.74
TUBGCP3-204ENST00000464139 THEMISQ8N1K5 641 aaPredicted RBP25.89■■□□□ 1.74
TUBGCP3-204ENST00000464139 DAXXQ9UER7 740 aaPredicted RBP25.89■■□□□ 1.74
TUBGCP3-204ENST00000464139 HDAC1Q13547 482 aaPredicted RBP25.89■■□□□ 1.73
TUBGCP3-204ENST00000464139 RTL5Q5HYW3 569 aaPredicted RBP25.89■■□□□ 1.73
TUBGCP3-204ENST00000464139 MRPL50Q8N5N7 158 aaKnown RBP25.89■■□□□ 1.73
TUBGCP3-204ENST00000464139 CFAP44Q96MT7 982 aa25.89■■□□□ 1.73
TUBGCP3-204ENST00000464139 BRPF1P55201 1214 aaPredicted RBP25.87■■□□□ 1.73
TUBGCP3-204ENST00000464139 C8orf58Q8NAV2 365 aa25.87■■□□□ 1.73
TUBGCP3-204ENST00000464139 TWISTNBQ3B726 338 aaPredicted RBP25.86■■□□□ 1.73
TUBGCP3-204ENST00000464139 PEAK1Q9H792 1746 aa25.85■■□□□ 1.73
TUBGCP3-204ENST00000464139 SSH2Q76I76 1423 aa25.85■■□□□ 1.73
TUBGCP3-204ENST00000464139 NGDNQ8NEJ9 315 aaKnown RBP25.84■■□□□ 1.73
TUBGCP3-204ENST00000464139 RGPD8O14715 1765 aaPredicted RBP25.84■■□□□ 1.73
TUBGCP3-204ENST00000464139 DEKP35659 375 aaKnown RBP25.83■■□□□ 1.73
TUBGCP3-204ENST00000464139 PTCH1Q13635 1447 aa25.83■■□□□ 1.73
TUBGCP3-204ENST00000464139 USP31Q70CQ4 1352 aa25.83■■□□□ 1.73
TUBGCP3-204ENST00000464139 NALCNQ8IZF0 1738 aa25.82■■□□□ 1.72
TUBGCP3-204ENST00000464139 DIP2AQ14689 1571 aa25.81■■□□□ 1.72
TUBGCP3-204ENST00000464139 SMC5Q8IY18 1101 aa25.81■■□□□ 1.72
TUBGCP3-204ENST00000464139 ARHGAP45Q92619 1136 aa25.8■■□□□ 1.72
TUBGCP3-204ENST00000464139 MAP3K19Q56UN5 1328 aa25.8■■□□□ 1.72
TUBGCP3-204ENST00000464139 MCM10Q7L590 875 aa25.79■■□□□ 1.72
TUBGCP3-204ENST00000464139 TTC21AQ8NDW8 1320 aa25.79■■□□□ 1.72
TUBGCP3-204ENST00000464139 KCNA6P17658 529 aa25.79■■□□□ 1.72
TUBGCP3-204ENST00000464139 ZBTB7BO15156 539 aaPredicted RBP25.78■■□□□ 1.72
TUBGCP3-204ENST00000464139 C1orf115Q9H7X2 142 aa25.77■■□□□ 1.72
TUBGCP3-204ENST00000464139 KRT24Q2M2I5 525 aa25.76■■□□□ 1.71
TUBGCP3-204ENST00000464139 PIK3R4Q99570 1358 aa25.75■■□□□ 1.71
TUBGCP3-204ENST00000464139 RGPD1P0DJD0 1748 aa25.74■■□□□ 1.71
TUBGCP3-204ENST00000464139 ABCC4O15439 1325 aa25.74■■□□□ 1.71
TUBGCP3-204ENST00000464139 XRN1Q8IZH2 1706 aaKnown RBP25.74■■□□□ 1.71
TUBGCP3-204ENST00000464139 NUTM2GQ5VZR2 741 aa25.73■■□□□ 1.71
TUBGCP3-204ENST00000464139 CHL1O00533 1208 aa25.72■■□□□ 1.71
TUBGCP3-204ENST00000464139 UPF2Q9HAU5 1272 aaKnown RBP25.72■■□□□ 1.71
TUBGCP3-204ENST00000464139 FOXO3O43524 673 aa25.72■■□□□ 1.71
TUBGCP3-204ENST00000464139 AMPHP49418 695 aa25.72■■□□□ 1.71
TUBGCP3-204ENST00000464139 NLRP6P59044 892 aa25.71■■□□□ 1.71
TUBGCP3-204ENST00000464139 NUCB1Q02818 461 aa25.71■■□□□ 1.71
TUBGCP3-204ENST00000464139 LNPKQ9C0E8 428 aa25.71■■□□□ 1.71
TUBGCP3-204ENST00000464139 SBNO1A3KN83 1393 aa25.71■■□□□ 1.71
TUBGCP3-204ENST00000464139 FLT4P35916 1363 aa25.71■■□□□ 1.71
TUBGCP3-204ENST00000464139 PIK3C2AO00443 1686 aa25.7■■□□□ 1.7
TUBGCP3-204ENST00000464139 TBC1D32Q96NH3 1257 aa25.7■■□□□ 1.7
TUBGCP3-204ENST00000464139 API5Q9BZZ5 524 aaKnown RBP25.7■■□□□ 1.7
TUBGCP3-204ENST00000464139 USP35Q9P2H5 1018 aa25.7■■□□□ 1.7
TUBGCP3-204ENST00000464139 FMN2Q9NZ56 1722 aa25.69■■□□□ 1.7
TUBGCP3-204ENST00000464139 ARHGEF10O15013 1369 aa25.69■■□□□ 1.7
TUBGCP3-204ENST00000464139 MTHFSDQ2M296 383 aaKnown RBP25.69■■□□□ 1.7
TUBGCP3-204ENST00000464139 CHMP4BQ9H444 224 aaKnown RBP25.69■■□□□ 1.7
TUBGCP3-204ENST00000464139 RIMS1Q86UR5 1692 aaKnown RBP25.68■■□□□ 1.7
TUBGCP3-204ENST00000464139 MIS18AQ9NYP9 233 aa25.68■■□□□ 1.7
TUBGCP3-204ENST00000464139 CEP170BQ9Y4F5 1589 aaPredicted RBP25.68■■□□□ 1.7
TUBGCP3-204ENST00000464139 CHD1LQ86WJ1 897 aa25.68■■□□□ 1.7
TUBGCP3-204ENST00000464139 EYA1Q99502 592 aa25.68■■□□□ 1.7
TUBGCP3-204ENST00000464139 NFKBIBQ15653 356 aa25.66■■□□□ 1.7
TUBGCP3-204ENST00000464139 SIRT2Q8IXJ6 389 aa25.66■■□□□ 1.7
TUBGCP3-204ENST00000464139 RBM33Q96EV2 1170 aaKnown RBP25.66■■□□□ 1.7
TUBGCP3-204ENST00000464139 ANKARQ7Z5J8 1434 aa25.65■■□□□ 1.7
TUBGCP3-204ENST00000464139 CRB1P82279 1406 aa25.65■■□□□ 1.7
TUBGCP3-204ENST00000464139 ANKRD45Q5TZF3 282 aa25.64■■□□□ 1.7
TUBGCP3-204ENST00000464139 MFAP1P55081 439 aaKnown RBP25.63■■□□□ 1.69
TUBGCP3-204ENST00000464139 ABTB2Q8N961 1025 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms