RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 PHLPP1O60346 1717 aa6.03□□□□□ -1.44
VPS72-203ENST00000463470 NBR1Q14596 966 aa6.03□□□□□ -1.44
VPS72-203ENST00000463470 SIRT1Q96EB6 747 aa6.03□□□□□ -1.44
VPS72-203ENST00000463470 NHSL1Q5SYE7 1610 aa6.03□□□□□ -1.44
VPS72-203ENST00000463470 MTHFSP49914 203 aa6.02□□□□□ -1.45
VPS72-203ENST00000463470 ZNF772Q68DY9 489 aaPredicted RBP6.02□□□□□ -1.45
VPS72-203ENST00000463470 LRRC59Q96AG4 307 aaKnown RBP6.02□□□□□ -1.45
VPS72-203ENST00000463470 SLC12A5Q9H2X9 1139 aa6.02□□□□□ -1.45
VPS72-203ENST00000463470 POGKQ9P215 609 aa6.02□□□□□ -1.45
VPS72-203ENST00000463470 DLC1Q96QB1 1528 aa6.02□□□□□ -1.45
VPS72-203ENST00000463470 EP400Q96L91 3159 aa6.01□□□□□ -1.45
VPS72-203ENST00000463470 TULP1O00294 542 aaPredicted RBP6.01□□□□□ -1.45
VPS72-203ENST00000463470 RGL2O15211 777 aa6.01□□□□□ -1.45
VPS72-203ENST00000463470 IPO8O15397 1037 aaKnown RBP6.01□□□□□ -1.45
VPS72-203ENST00000463470 SRPK2P78362 688 aaKnown RBP6.01□□□□□ -1.45
VPS72-203ENST00000463470 POLA2Q14181 598 aa6.01□□□□□ -1.45
VPS72-203ENST00000463470 C14orf37Q86TY3 774 aa6.01□□□□□ -1.45
VPS72-203ENST00000463470 TCP11L2Q8N4U5 519 aa6.01□□□□□ -1.45
VPS72-203ENST00000463470 DDX17Q92841 729 aaKnown RBP6.01□□□□□ -1.45
VPS72-203ENST00000463470 UPF1Q92900 1129 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS72-203ENST00000463470 CLUAP1Q96AJ1 413 aa6.01□□□□□ -1.45
VPS72-203ENST00000463470 ORAI2Q96SN7 254 aa6.01□□□□□ -1.45
VPS72-203ENST00000463470 RWDD1Q9H446 243 aaPredicted RBP6.01□□□□□ -1.45
VPS72-203ENST00000463470 UPF2Q9HAU5 1272 aaKnown RBP6.01□□□□□ -1.45
VPS72-203ENST00000463470 NALCNQ8IZF0 1738 aa6.01□□□□□ -1.45
VPS72-203ENST00000463470 YTHDC2Q9H6S0 1430 aaKnown RBP6□□□□□ -1.45
VPS72-203ENST00000463470 PLIN1O60240 522 aa6□□□□□ -1.45
VPS72-203ENST00000463470 FCHSD2O94868 740 aa6□□□□□ -1.45
VPS72-203ENST00000463470 U2AF1L5P0DN76 240 aaPredicted RBP6□□□□□ -1.45
VPS72-203ENST00000463470 U2AF1Q01081 240 aaKnown RBP eCLIP6□□□□□ -1.45
VPS72-203ENST00000463470 BECN1Q14457 450 aa6□□□□□ -1.45
VPS72-203ENST00000463470 ZKSCAN2Q63HK3 967 aa6□□□□□ -1.45
VPS72-203ENST00000463470 CCDC146Q8IYE0 955 aa6□□□□□ -1.45
VPS72-203ENST00000463470 FNBP4Q8N3X1 1017 aaPredicted RBP6□□□□□ -1.45
VPS72-203ENST00000463470 PXDNQ92626 1479 aa6□□□□□ -1.45
VPS72-203ENST00000463470 CDC42BPGQ6DT37 1551 aa6□□□□□ -1.45
VPS72-203ENST00000463470 AFF2P51816 1311 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 ARHGEF28Q8N1W1 1705 aaKnown RBP5.99□□□□□ -1.45
VPS72-203ENST00000463470 ATP7BP35670 1465 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 DIAPH1O60610 1272 aaKnown RBP5.99□□□□□ -1.45
VPS72-203ENST00000463470 RARSP54136 660 aaKnown RBP5.99□□□□□ -1.45
VPS72-203ENST00000463470 LMOD3Q0VAK6 560 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 ALDH1L2Q3SY69 923 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 TMEM132EQ6IEE7 984 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 PLCD3Q8N3E9 789 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 DDX19BQ9UMR2 479 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 TULP4Q9NRJ4 1543 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 KIF16BQ96L93 1317 aa5.99□□□□□ -1.45
VPS72-203ENST00000463470 BCL9LQ86UU0 1499 aa5.98□□□□□ -1.45
VPS72-203ENST00000463470 RXRBP28702 533 aa5.98□□□□□ -1.45
VPS72-203ENST00000463470 BRPF1P55201 1214 aaPredicted RBP5.98□□□□□ -1.45
VPS72-203ENST00000463470 ZNF692Q9BU19 519 aaPredicted RBP5.98□□□□□ -1.45
VPS72-203ENST00000463470 COL22A1Q8NFW1 1626 aaPredicted RBP5.98□□□□□ -1.45
VPS72-203ENST00000463470 RGS12O14924 1447 aa5.98□□□□□ -1.45
VPS72-203ENST00000463470 A0A1W2PP64 1363 aa5.97□□□□□ -1.45
VPS72-203ENST00000463470 RBM6P78332 1123 aaKnown RBP5.97□□□□□ -1.45
VPS72-203ENST00000463470 C20orf194Q5TEA3 1177 aa5.97□□□□□ -1.45
VPS72-203ENST00000463470 NPM2Q86SE8 214 aaKnown RBP5.97□□□□□ -1.45
VPS72-203ENST00000463470 FTSJ3Q8IY81 847 aaKnown RBP5.97□□□□□ -1.45
VPS72-203ENST00000463470 DZIP1LQ8IYY4 767 aaKnown RBP5.97□□□□□ -1.45
VPS72-203ENST00000463470 PRAM1Q96QH2 718 aa5.97□□□□□ -1.45
VPS72-203ENST00000463470 QTRT2Q9H974 415 aaKnown RBP5.97□□□□□ -1.45
VPS72-203ENST00000463470 CABP2Q9NPB3 220 aa5.97□□□□□ -1.45
VPS72-203ENST00000463470 ATRNO75882 1429 aa5.97□□□□□ -1.45
VPS72-203ENST00000463470 ADGRB2O60241 1585 aa5.97□□□□□ -1.45
VPS72-203ENST00000463470 ANKRD26Q9UPS8 1709 aa5.96□□□□□ -1.45
VPS72-203ENST00000463470 AATKQ6ZMQ8 1374 aa5.96□□□□□ -1.45
VPS72-203ENST00000463470 SENP3-EIF4A1A0A087X0R7 540 aa5.96□□□□□ -1.46
VPS72-203ENST00000463470 NUTM2BA6NNL0 878 aaPredicted RBP5.96□□□□□ -1.46
VPS72-203ENST00000463470 NUTM2EB1AL46 878 aaPredicted RBP5.96□□□□□ -1.46
VPS72-203ENST00000463470 FYB1O15117 783 aa5.96□□□□□ -1.46
VPS72-203ENST00000463470 BCAR3O75815 825 aa5.96□□□□□ -1.46
VPS72-203ENST00000463470 TMPOP42166 694 aaKnown RBP5.96□□□□□ -1.46
VPS72-203ENST00000463470 HDAC1Q13547 482 aaPredicted RBP5.96□□□□□ -1.46
VPS72-203ENST00000463470 MVPQ14764 893 aaKnown RBP5.96□□□□□ -1.46
VPS72-203ENST00000463470 WAPLQ7Z5K2 1190 aa5.96□□□□□ -1.46
VPS72-203ENST00000463470 NUTM2AQ8IVF1 878 aaPredicted RBP5.96□□□□□ -1.46
VPS72-203ENST00000463470 ARHGAP45Q92619 1136 aa5.96□□□□□ -1.46
VPS72-203ENST00000463470 CDK19Q9BWU1 502 aa5.96□□□□□ -1.46
VPS72-203ENST00000463470 SPINK5Q9NQ38 1064 aaPredicted RBP5.96□□□□□ -1.46
VPS72-203ENST00000463470 CIZ1Q9ULV3 898 aaPredicted RBP5.96□□□□□ -1.46
VPS72-203ENST00000463470 NPHP3Q7Z494 1330 aa5.96□□□□□ -1.46
VPS72-203ENST00000463470 U2SURPO15042 1029 aaKnown RBP5.95□□□□□ -1.46
VPS72-203ENST00000463470 FOXO3O43524 673 aa5.95□□□□□ -1.46
VPS72-203ENST00000463470 DEKP35659 375 aaKnown RBP5.95□□□□□ -1.46
VPS72-203ENST00000463470 TNNT2P45379 298 aaPredicted RBP5.95□□□□□ -1.46
VPS72-203ENST00000463470 GNAI1P63096 354 aa5.95□□□□□ -1.46
VPS72-203ENST00000463470 C8orf34Q49A92 452 aa5.95□□□□□ -1.46
VPS72-203ENST00000463470 MEX3CQ5U5Q3 659 aaKnown RBP5.95□□□□□ -1.46
VPS72-203ENST00000463470 EDC4Q6P2E9 1401 aaKnown RBP5.95□□□□□ -1.46
VPS72-203ENST00000463470 PPIP5K1Q6PFW1 1433 aa5.95□□□□□ -1.46
VPS72-203ENST00000463470 FRAT1Q92837 279 aaPredicted RBP5.95□□□□□ -1.46
VPS72-203ENST00000463470 C8orf37Q96NL8 207 aa5.95□□□□□ -1.46
VPS72-203ENST00000463470 PLEKHF1Q96S99 279 aa5.95□□□□□ -1.46
VPS72-203ENST00000463470 STK26Q9P289 416 aa5.95□□□□□ -1.46
VPS72-203ENST00000463470 SPATA31A3Q5VYP0 1347 aa5.95□□□□□ -1.46
VPS72-203ENST00000463470 SLIT2O94813 1529 aa5.94□□□□□ -1.46
VPS72-203ENST00000463470 WASLO00401 505 aaPredicted RBP5.94□□□□□ -1.46
VPS72-203ENST00000463470 ONECUT3O60422 494 aaPredicted RBP5.94□□□□□ -1.46
VPS72-203ENST00000463470 PAK3O75914 559 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms