RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 PLEKHG5O94827 1062 aa19.76■□□□□ 0.75
RPRD1B-203ENST00000462548 GOLGA2Q08379 1002 aa19.76■□□□□ 0.75
RPRD1B-203ENST00000462548 NPHP3Q7Z494 1330 aa19.76■□□□□ 0.75
RPRD1B-203ENST00000462548 HOXC9P31274 260 aa19.76■□□□□ 0.75
RPRD1B-203ENST00000462548 USP19O94966 1318 aa19.76■□□□□ 0.75
RPRD1B-203ENST00000462548 LTBP4Q8N2S1 1624 aa19.75■□□□□ 0.75
RPRD1B-203ENST00000462548 TMPOP42166 694 aaKnown RBP19.75■□□□□ 0.75
RPRD1B-203ENST00000462548 AEBP1Q8IUX7 1158 aa19.75■□□□□ 0.75
RPRD1B-203ENST00000462548 MAPK8IP3Q9UPT6 1336 aa19.75■□□□□ 0.75
RPRD1B-203ENST00000462548 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
RPRD1B-203ENST00000462548 DUSP27Q5VZP5 1158 aa19.74■□□□□ 0.75
RPRD1B-203ENST00000462548 PHACTR3Q96KR7 559 aa19.74■□□□□ 0.75
RPRD1B-203ENST00000462548 MED1Q15648 1581 aaPredicted RBP19.74■□□□□ 0.75
RPRD1B-203ENST00000462548 KIF24Q5T7B8 1368 aa19.73■□□□□ 0.75
RPRD1B-203ENST00000462548 GCP02774 474 aa19.73■□□□□ 0.75
RPRD1B-203ENST00000462548 CCDC27Q2M243 656 aa19.73■□□□□ 0.75
RPRD1B-203ENST00000462548 TRMT2AQ8IZ69 625 aaKnown RBP19.73■□□□□ 0.75
RPRD1B-203ENST00000462548 KCNH5Q8NCM2 988 aa19.73■□□□□ 0.75
RPRD1B-203ENST00000462548 PNNQ9H307 717 aaKnown RBP19.72■□□□□ 0.75
RPRD1B-203ENST00000462548 FKBP8Q14318 412 aa19.72■□□□□ 0.75
RPRD1B-203ENST00000462548 TNS3Q68CZ2 1445 aa19.72■□□□□ 0.75
RPRD1B-203ENST00000462548 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
RPRD1B-203ENST00000462548 SULT6B1Q6IMI4 303 aa19.71■□□□□ 0.75
RPRD1B-203ENST00000462548 TRIM35Q9UPQ4 493 aa19.71■□□□□ 0.75
RPRD1B-203ENST00000462548 RTL1A6NKG5 1358 aa19.71■□□□□ 0.75
RPRD1B-203ENST00000462548 SPATA31A3Q5VYP0 1347 aa19.7■□□□□ 0.74
RPRD1B-203ENST00000462548 PHRF1Q9P1Y6 1649 aaKnown RBP19.7■□□□□ 0.74
RPRD1B-203ENST00000462548 ZBTB7CA1YPR0 619 aa19.69■□□□□ 0.74
RPRD1B-203ENST00000462548 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
RPRD1B-203ENST00000462548 ARHGEF25Q86VW2 580 aa19.69■□□□□ 0.74
RPRD1B-203ENST00000462548 IP6K1Q92551 441 aa19.69■□□□□ 0.74
RPRD1B-203ENST00000462548 EYA1Q99502 592 aa19.69■□□□□ 0.74
RPRD1B-203ENST00000462548 ARHGEF10O15013 1369 aa19.69■□□□□ 0.74
RPRD1B-203ENST00000462548 RIPK4P57078 832 aa19.68■□□□□ 0.74
RPRD1B-203ENST00000462548 SOS2Q07890 1332 aaPredicted RBP19.68■□□□□ 0.74
RPRD1B-203ENST00000462548 RNF123Q5XPI4 1314 aa19.68■□□□□ 0.74
RPRD1B-203ENST00000462548 E9PSI1 815 aa19.67■□□□□ 0.74
RPRD1B-203ENST00000462548 WDR63Q8IWG1 891 aa19.67■□□□□ 0.74
RPRD1B-203ENST00000462548 LTV1Q96GA3 475 aaPredicted RBP19.67■□□□□ 0.74
RPRD1B-203ENST00000462548 IGSF1Q8N6C5 1336 aa19.67■□□□□ 0.74
RPRD1B-203ENST00000462548 NEFLP07196 543 aa19.67■□□□□ 0.74
RPRD1B-203ENST00000462548 RCAN3Q9UKA8 241 aa19.67■□□□□ 0.74
RPRD1B-203ENST00000462548 CRYBG1Q9Y4K1 1723 aa19.67■□□□□ 0.74
RPRD1B-203ENST00000462548 NFE2L2Q16236 605 aa19.66■□□□□ 0.74
RPRD1B-203ENST00000462548 CABLES1Q8TDN4 633 aa19.66■□□□□ 0.74
RPRD1B-203ENST00000462548 NHSL1Q5SYE7 1610 aa19.65■□□□□ 0.74
RPRD1B-203ENST00000462548 KDRP35968 1356 aa19.65■□□□□ 0.74
RPRD1B-203ENST00000462548 DLG5Q8TDM6 1919 aa19.64■□□□□ 0.73
RPRD1B-203ENST00000462548 NEFMP07197 916 aa19.64■□□□□ 0.73
RPRD1B-203ENST00000462548 ZC3H6P61129 1189 aaKnown RBP19.64■□□□□ 0.73
RPRD1B-203ENST00000462548 AXIN2Q9Y2T1 843 aa19.63■□□□□ 0.73
RPRD1B-203ENST00000462548 RGPD2P0DJD1 1756 aa19.61■□□□□ 0.73
RPRD1B-203ENST00000462548 USHBP1Q8N6Y0 703 aa19.61■□□□□ 0.73
RPRD1B-203ENST00000462548 RGPD5Q99666 1765 aa19.6■□□□□ 0.73
RPRD1B-203ENST00000462548 NBPF6Q5VWK0 638 aa19.6■□□□□ 0.73
RPRD1B-203ENST00000462548 NBPF4Q96M43 638 aa19.6■□□□□ 0.73
RPRD1B-203ENST00000462548 THUMPD2Q9BTF0 503 aaKnown RBP19.6■□□□□ 0.73
RPRD1B-203ENST00000462548 ROBO1Q9Y6N7 1651 aa19.59■□□□□ 0.73
RPRD1B-203ENST00000462548 LRRC59Q96AG4 307 aaKnown RBP19.59■□□□□ 0.73
RPRD1B-203ENST00000462548 COL18A1P39060 1754 aa19.59■□□□□ 0.73
RPRD1B-203ENST00000462548 RRP1P56182 461 aaKnown RBP19.58■□□□□ 0.72
RPRD1B-203ENST00000462548 FAM83GA6ND36 823 aa19.57■□□□□ 0.72
RPRD1B-203ENST00000462548 ANKRD24Q8TF21 1146 aa19.57■□□□□ 0.72
RPRD1B-203ENST00000462548 TSR2Q969E8 191 aaKnown RBP19.57■□□□□ 0.72
RPRD1B-203ENST00000462548 IL16Q14005 1332 aa19.56■□□□□ 0.72
RPRD1B-203ENST00000462548 MTHFSDQ2M296 383 aaKnown RBP19.56■□□□□ 0.72
RPRD1B-203ENST00000462548 KIAA0232Q92628 1395 aa19.56■□□□□ 0.72
RPRD1B-203ENST00000462548 FANCIQ9NVI1 1328 aa19.55■□□□□ 0.72
RPRD1B-203ENST00000462548 DCTN1Q14203 1278 aa19.55■□□□□ 0.72
RPRD1B-203ENST00000462548 MYH16Q9H6N6 1097 aa19.55■□□□□ 0.72
RPRD1B-203ENST00000462548 ABCA3Q99758 1704 aa19.55■□□□□ 0.72
RPRD1B-203ENST00000462548 CHRNA2Q15822 529 aa19.55■□□□□ 0.72
RPRD1B-203ENST00000462548 CPDO75976 1380 aa19.54■□□□□ 0.72
RPRD1B-203ENST00000462548 NCAPD2Q15021 1401 aa19.53■□□□□ 0.72
RPRD1B-203ENST00000462548 CAMTA1Q9Y6Y1 1673 aa19.53■□□□□ 0.72
RPRD1B-203ENST00000462548 PLIN1O60240 522 aa19.53■□□□□ 0.72
RPRD1B-203ENST00000462548 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
RPRD1B-203ENST00000462548 ERBB3P21860 1342 aa19.52■□□□□ 0.72
RPRD1B-203ENST00000462548 LMOD3Q0VAK6 560 aa19.52■□□□□ 0.71
RPRD1B-203ENST00000462548 LMO7Q8WWI1 1683 aa19.51■□□□□ 0.71
RPRD1B-203ENST00000462548 BCAR3O75815 825 aa19.5■□□□□ 0.71
RPRD1B-203ENST00000462548 EXOSC9Q06265 439 aaKnown RBP19.5■□□□□ 0.71
RPRD1B-203ENST00000462548 MCM10Q7L590 875 aa19.5■□□□□ 0.71
RPRD1B-203ENST00000462548 ZNF853P0CG23 659 aa19.5■□□□□ 0.71
RPRD1B-203ENST00000462548 AEBP2Q6ZN18 517 aaPredicted RBP19.5■□□□□ 0.71
RPRD1B-203ENST00000462548 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
RPRD1B-203ENST00000462548 ABCC6O95255 1503 aa19.5■□□□□ 0.71
RPRD1B-203ENST00000462548 GAS2L2Q8NHY3 880 aa19.49■□□□□ 0.71
RPRD1B-203ENST00000462548 IFT57Q9NWB7 429 aa19.47■□□□□ 0.71
RPRD1B-203ENST00000462548 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
RPRD1B-203ENST00000462548 CALD1Q05682 793 aaKnown RBP19.46■□□□□ 0.71
RPRD1B-203ENST00000462548 FAM208AQ9UK61 1670 aaKnown RBP19.46■□□□□ 0.71
RPRD1B-203ENST00000462548 RARSP54136 660 aaKnown RBP19.46■□□□□ 0.71
RPRD1B-203ENST00000462548 ERICH6BQ5W0A0 696 aa19.46■□□□□ 0.71
RPRD1B-203ENST00000462548 PRDM11Q9NQV5 511 aa19.46■□□□□ 0.71
RPRD1B-203ENST00000462548 MBIPQ9NS73 344 aa19.46■□□□□ 0.71
RPRD1B-203ENST00000462548 CRB1P82279 1406 aa19.46■□□□□ 0.71
RPRD1B-203ENST00000462548 HAP1P54257 671 aaPredicted RBP19.45■□□□□ 0.7
RPRD1B-203ENST00000462548 GNAI1P63096 354 aa19.45■□□□□ 0.7
RPRD1B-203ENST00000462548 CFAP44Q96MT7 982 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms