RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 LIAT1Q6ZQX7 453 aa8.98□□□□□ -0.97
VPS36-202ENST00000462289 CFDP1Q9UEE9 299 aaPredicted RBP8.98□□□□□ -0.97
VPS36-202ENST00000462289 SALL2Q9Y467 1007 aaPredicted RBP8.98□□□□□ -0.97
VPS36-202ENST00000462289 ATP7AQ04656 1500 aa8.98□□□□□ -0.97
VPS36-202ENST00000462289 IRF6O14896 467 aa8.97□□□□□ -0.97
VPS36-202ENST00000462289 PRR20EP86478 221 aa8.97□□□□□ -0.97
VPS36-202ENST00000462289 PRR20CP86479 221 aa8.97□□□□□ -0.97
VPS36-202ENST00000462289 PRR20DP86480 221 aa8.97□□□□□ -0.97
VPS36-202ENST00000462289 PRR20BP86481 221 aa8.97□□□□□ -0.97
VPS36-202ENST00000462289 PRR20AP86496 221 aa8.97□□□□□ -0.97
VPS36-202ENST00000462289 PLA2G2CQ5R387 149 aa8.97□□□□□ -0.97
VPS36-202ENST00000462289 ZNF644Q9H582 1327 aaPredicted RBP8.97□□□□□ -0.97
VPS36-202ENST00000462289 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
VPS36-202ENST00000462289 ATP10AO60312 1499 aa8.96□□□□□ -0.97
VPS36-202ENST00000462289 SLC27A5Q9Y2P5 690 aa8.96□□□□□ -0.98
VPS36-202ENST00000462289 MINK1Q8N4C8 1332 aaPredicted RBP8.96□□□□□ -0.98
VPS36-202ENST00000462289 CD46P15529 392 aa8.95□□□□□ -0.98
VPS36-202ENST00000462289 AFAP1Q8N556 730 aa8.95□□□□□ -0.98
VPS36-202ENST00000462289 ABCC5O15440 1437 aa8.95□□□□□ -0.98
VPS36-202ENST00000462289 C9orf84Q5VXU9 1444 aa8.95□□□□□ -0.98
VPS36-202ENST00000462289 ADGRL2O95490 1459 aa8.95□□□□□ -0.98
VPS36-202ENST00000462289 FMNL1O95466 1100 aaPredicted RBP8.94□□□□□ -0.98
VPS36-202ENST00000462289 EIF2AK4Q9P2K8 1649 aaKnown RBP8.94□□□□□ -0.98
VPS36-202ENST00000462289 GDF9O60383 454 aa8.93□□□□□ -0.98
VPS36-202ENST00000462289 BRICD5Q6PL45 260 aa8.93□□□□□ -0.98
VPS36-202ENST00000462289 FAM160A2Q8N612 972 aaPredicted RBP8.93□□□□□ -0.98
VPS36-202ENST00000462289 DAPK1P53355 1430 aa8.93□□□□□ -0.98
VPS36-202ENST00000462289 FAM135AQ9P2D6 1515 aa8.93□□□□□ -0.98
VPS36-202ENST00000462289 RNF17Q9BXT8 1623 aaKnown RBP8.92□□□□□ -0.98
VPS36-202ENST00000462289 HNRNPMP52272 730 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS36-202ENST00000462289 GRIPAP1Q4V328 841 aa8.92□□□□□ -0.98
VPS36-202ENST00000462289 ZNF697Q5TEC3 545 aa8.92□□□□□ -0.98
VPS36-202ENST00000462289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS36-202ENST00000462289 DEPDC5O75140 1603 aa8.91□□□□□ -0.98
VPS36-202ENST00000462289 MSS51Q4VC12 460 aa8.91□□□□□ -0.98
VPS36-202ENST00000462289 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
VPS36-202ENST00000462289 MROH1Q8NDA8 1641 aa8.91□□□□□ -0.98
VPS36-202ENST00000462289 PTPRKQ15262 1439 aa8.9□□□□□ -0.98
VPS36-202ENST00000462289 MROH2AA6NES4 1674 aa8.9□□□□□ -0.98
VPS36-202ENST00000462289 A2MP01023 1474 aa8.89□□□□□ -0.99
VPS36-202ENST00000462289 SPAG9O60271 1321 aaKnown RBP8.89□□□□□ -0.99
VPS36-202ENST00000462289 RPIAP49247 311 aa8.89□□□□□ -0.99
VPS36-202ENST00000462289 RNF19BQ6ZMZ0 732 aa8.89□□□□□ -0.99
VPS36-202ENST00000462289 FCF1Q9Y324 198 aaKnown RBP8.89□□□□□ -0.99
VPS36-202ENST00000462289 DUOX2Q9NRD8 1548 aa8.89□□□□□ -0.99
VPS36-202ENST00000462289 FER1L4A9Z1Z3 1794 aa8.89□□□□□ -0.99
VPS36-202ENST00000462289 NCOA1Q15788 1441 aa8.88□□□□□ -0.99
VPS36-202ENST00000462289 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
VPS36-202ENST00000462289 DHX29Q7Z478 1369 aaKnown RBP8.88□□□□□ -0.99
VPS36-202ENST00000462289 MADDQ8WXG6 1647 aa8.88□□□□□ -0.99
VPS36-202ENST00000462289 VWDEQ8N2E2 1590 aa8.88□□□□□ -0.99
VPS36-202ENST00000462289 DGAT1O75907 488 aa8.88□□□□□ -0.99
VPS36-202ENST00000462289 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
VPS36-202ENST00000462289 LMOD2Q6P5Q4 547 aa8.88□□□□□ -0.99
VPS36-202ENST00000462289 PRDM9Q9NQV7 894 aa8.88□□□□□ -0.99
VPS36-202ENST00000462289 KDM5DQ9BY66 1539 aa8.88□□□□□ -0.99
VPS36-202ENST00000462289 PRDM15P57071 1507 aaPredicted RBP8.87□□□□□ -0.99
VPS36-202ENST00000462289 KDM4AO75164 1064 aa8.87□□□□□ -0.99
VPS36-202ENST00000462289 Q3C1V9 767 aa8.87□□□□□ -0.99
VPS36-202ENST00000462289 PKD2L1Q9P0L9 805 aa8.87□□□□□ -0.99
VPS36-202ENST00000462289 ZNF777Q9ULD5 760 aaPredicted RBP8.87□□□□□ -0.99
VPS36-202ENST00000462289 ERBINQ96RT1 1412 aa8.87□□□□□ -0.99
VPS36-202ENST00000462289 ZC3H13Q5T200 1668 aaKnown RBP8.86□□□□□ -0.99
VPS36-202ENST00000462289 GCC2Q8IWJ2 1684 aa8.86□□□□□ -0.99
VPS36-202ENST00000462289 USP46P62068 366 aa8.86□□□□□ -0.99
VPS36-202ENST00000462289 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
VPS36-202ENST00000462289 SETD1BQ9UPS6 1966 aaKnown RBP8.85□□□□□ -0.99
VPS36-202ENST00000462289 MMP16P51512 607 aa8.85□□□□□ -0.99
VPS36-202ENST00000462289 PKDCCQ504Y2 493 aa8.85□□□□□ -0.99
VPS36-202ENST00000462289 FAM217BQ9NTX9 383 aaPredicted RBP8.85□□□□□ -0.99
VPS36-202ENST00000462289 TNFRSF10AO00220 468 aa8.84□□□□□ -0.99
VPS36-202ENST00000462289 UNC13BO14795 1591 aa8.84□□□□□ -0.99
VPS36-202ENST00000462289 CLCN1P35523 988 aa8.84□□□□□ -0.99
VPS36-202ENST00000462289 MYT1Q01538 1121 aa8.84□□□□□ -0.99
VPS36-202ENST00000462289 C3P01024 1663 aa8.84□□□□□ -0.99
VPS36-202ENST00000462289 RIMS1Q86UR5 1692 aaKnown RBP8.84□□□□□ -0.99
VPS36-202ENST00000462289 PTPRMP28827 1452 aa8.83□□□□□ -1
VPS36-202ENST00000462289 HOXA2O43364 376 aa8.83□□□□□ -1
VPS36-202ENST00000462289 CD2BP2O95400 341 aaKnown RBP8.83□□□□□ -1
VPS36-202ENST00000462289 LMTK2Q8IWU2 1503 aa8.83□□□□□ -1
VPS36-202ENST00000462289 KIF15Q9NS87 1388 aa8.83□□□□□ -1
VPS36-202ENST00000462289 CNTLNQ9NXG0 1405 aa8.82□□□□□ -1
VPS36-202ENST00000462289 TSPY4P0CV99 314 aa8.82□□□□□ -1
VPS36-202ENST00000462289 TSPY10P0CW01 314 aa8.82□□□□□ -1
VPS36-202ENST00000462289 USB1Q9BQ65 265 aaKnown RBP8.82□□□□□ -1
VPS36-202ENST00000462289 ANKRD30AQ9BXX3 1397 aa8.82□□□□□ -1
VPS36-202ENST00000462289 ABCC3O15438 1527 aa8.81□□□□□ -1
VPS36-202ENST00000462289 DXOO77932 396 aaKnown RBP8.81□□□□□ -1
VPS36-202ENST00000462289 HLA-CQ95604 372 aa8.81□□□□□ -1
VPS36-202ENST00000462289 CLTCQ00610 1675 aaKnown RBP8.81□□□□□ -1
VPS36-202ENST00000462289 HFM1A2PYH4 1435 aa8.8□□□□□ -1
VPS36-202ENST00000462289 FAM187AA6NFU0 413 aa8.8□□□□□ -1
VPS36-202ENST00000462289 ZMYND10O75800 440 aa8.8□□□□□ -1
VPS36-202ENST00000462289 ZNF787Q6DD87 383 aa8.8□□□□□ -1
VPS36-202ENST00000462289 BARGINQ6ZT62 677 aa8.8□□□□□ -1
VPS36-202ENST00000462289 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
VPS36-202ENST00000462289 TOR4AQ9NXH8 423 aa8.8□□□□□ -1
VPS36-202ENST00000462289 IQGAP3Q86VI3 1631 aa8.8□□□□□ -1
VPS36-202ENST00000462289 NAIPQ13075 1403 aa8.8□□□□□ -1
VPS36-202ENST00000462289 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 279.9 ms