RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 FOXJ1Q92949 421 aa5.81□□□□□ -1.48
HDAC6-212ENST00000461608 PPFIA3O75145 1194 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 IRS1P35568 1242 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 QPCTQ16769 361 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 CSPP1Q1MSJ5 1256 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 C4orf48Q5BLP8 95 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 DESI1Q6ICB0 168 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 PROSER2Q86WR7 435 aaPredicted RBP5.8□□□□□ -1.48
HDAC6-212ENST00000461608 FAM174AQ8TBP5 190 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 ZBTB3Q9H5J0 574 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 LIMD1Q9UGP4 676 aa5.8□□□□□ -1.48
HDAC6-212ENST00000461608 SOBPA7XYQ1 873 aa5.79□□□□□ -1.48
HDAC6-212ENST00000461608 LYPD8Q6UX82 237 aa5.79□□□□□ -1.48
HDAC6-212ENST00000461608 MPNDQ8N594 471 aa5.79□□□□□ -1.48
HDAC6-212ENST00000461608 CNTNAP3BQ96NU0 1288 aa5.79□□□□□ -1.48
HDAC6-212ENST00000461608 CNTNAP3Q9BZ76 1288 aa5.79□□□□□ -1.48
HDAC6-212ENST00000461608 LILRB3O75022 631 aa5.78□□□□□ -1.48
HDAC6-212ENST00000461608 TIMP2P16035 220 aa5.78□□□□□ -1.48
HDAC6-212ENST00000461608 CTHP32929 405 aa5.78□□□□□ -1.48
HDAC6-212ENST00000461608 MAP3K10Q02779 954 aa5.78□□□□□ -1.48
HDAC6-212ENST00000461608 ARID5BQ14865 1188 aa5.78□□□□□ -1.48
HDAC6-212ENST00000461608 KLF16Q9BXK1 252 aaPredicted RBP5.78□□□□□ -1.48
HDAC6-212ENST00000461608 TRAK2O60296 914 aa5.77□□□□□ -1.49
HDAC6-212ENST00000461608 ZIC2O95409 532 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-212ENST00000461608 HELBQ8NG08 1087 aaPredicted RBP5.77□□□□□ -1.49
HDAC6-212ENST00000461608 ENAMQ9NRM1 1142 aa5.77□□□□□ -1.49
HDAC6-212ENST00000461608 NUTM2BA6NNL0 878 aaPredicted RBP5.76□□□□□ -1.49
HDAC6-212ENST00000461608 NUTM2EB1AL46 878 aaPredicted RBP5.76□□□□□ -1.49
HDAC6-212ENST00000461608 NR3C2P08235 984 aa5.76□□□□□ -1.49
HDAC6-212ENST00000461608 AGERQ15109 404 aa5.76□□□□□ -1.49
HDAC6-212ENST00000461608 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.76□□□□□ -1.496e-6■■□□□ 12.4
HDAC6-212ENST00000461608 NUTM2DQ5VT03 806 aaPredicted RBP5.76□□□□□ -1.49
HDAC6-212ENST00000461608 FBXO31Q5XUX0 539 aaPredicted RBP5.76□□□□□ -1.49
HDAC6-212ENST00000461608 NUTM2AQ8IVF1 878 aaPredicted RBP5.76□□□□□ -1.49
HDAC6-212ENST00000461608 GALNT6Q8NCL4 622 aa5.76□□□□□ -1.49
HDAC6-212ENST00000461608 CLUAP1Q96AJ1 413 aa5.76□□□□□ -1.49
HDAC6-212ENST00000461608 GSK3AP49840 483 aa5.75□□□□□ -1.49
HDAC6-212ENST00000461608 NR5A1Q13285 461 aa5.75□□□□□ -1.49
HDAC6-212ENST00000461608 RTL5Q5HYW3 569 aaPredicted RBP5.75□□□□□ -1.49
HDAC6-212ENST00000461608 ZFAND3Q9H8U3 227 aa5.75□□□□□ -1.49
HDAC6-212ENST00000461608 MSTNO14793 375 aa5.74□□□□□ -1.49
HDAC6-212ENST00000461608 USP17L8P0C7I0 530 aa5.74□□□□□ -1.49
HDAC6-212ENST00000461608 GRM5P41594 1212 aa5.74□□□□□ -1.49
HDAC6-212ENST00000461608 LINC00528Q8N1L1 170 aa5.74□□□□□ -1.49
HDAC6-212ENST00000461608 ITPKCQ96DU7 683 aa5.74□□□□□ -1.49
HDAC6-212ENST00000461608 CDK15Q96Q40 435 aa5.74□□□□□ -1.49
HDAC6-212ENST00000461608 COG6Q9Y2V7 657 aa5.74□□□□□ -1.49
HDAC6-212ENST00000461608 PHF20L1A8MW92 1017 aa5.73□□□□□ -1.49
HDAC6-212ENST00000461608 XP32Q5T750 250 aa5.73□□□□□ -1.49
HDAC6-212ENST00000461608 PODNQ7Z5L7 613 aa5.73□□□□□ -1.49
HDAC6-212ENST00000461608 FNBP4Q8N3X1 1017 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-212ENST00000461608 MTMR14Q8NCE2 650 aa5.73□□□□□ -1.49
HDAC6-212ENST00000461608 TSC1Q92574 1164 aa5.73□□□□□ -1.49
HDAC6-212ENST00000461608 COL25A1Q9BXS0 654 aaPredicted RBP5.73□□□□□ -1.49
HDAC6-212ENST00000461608 NDUFB9Q9Y6M9 179 aa5.73□□□□□ -1.49
HDAC6-212ENST00000461608 AP1G2O75843 785 aa5.72□□□□□ -1.49
HDAC6-212ENST00000461608 TSEN34Q9BSV6 310 aaKnown RBP5.72□□□□□ -1.49
HDAC6-212ENST00000461608 CDC14CA4D256 554 aa5.71□□□□□ -1.5
HDAC6-212ENST00000461608 ZNF385CQ66K41 422 aaPredicted RBP5.71□□□□□ -1.5
HDAC6-212ENST00000461608 PNMA1Q8ND90 353 aa5.71□□□□□ -1.5
HDAC6-212ENST00000461608 CCDC97Q96F63 343 aaPredicted RBP5.71□□□□□ -1.5
HDAC6-212ENST00000461608 C1QTNF2Q9BXJ5 285 aa5.71□□□□□ -1.5
HDAC6-212ENST00000461608 SNRKQ9NRH2 765 aa5.71□□□□□ -1.5
HDAC6-212ENST00000461608 SERPINA10Q9UK55 444 aa5.71□□□□□ -1.5
HDAC6-212ENST00000461608 TTLL8A6PVC2 850 aa5.7□□□□□ -1.5
HDAC6-212ENST00000461608 SV2AQ7L0J3 742 aa5.7□□□□□ -1.5
HDAC6-212ENST00000461608 SH3RF1Q7Z6J0 888 aa5.7□□□□□ -1.5
HDAC6-212ENST00000461608 POM121Q96HA1 1249 aa5.7□□□□□ -1.5
HDAC6-212ENST00000461608 C1orf115Q9H7X2 142 aa5.7□□□□□ -1.5
HDAC6-212ENST00000461608 ARID3CA6NKF2 412 aa5.69□□□□□ -1.5
HDAC6-212ENST00000461608 ADAM23O75077 832 aa5.69□□□□□ -1.5
HDAC6-212ENST00000461608 WASHC4Q2M389 1173 aa5.69□□□□□ -1.5
HDAC6-212ENST00000461608 SH3BP5LQ7L8J4 393 aa5.69□□□□□ -1.5
HDAC6-212ENST00000461608 CCDC82Q8N4S0 544 aa5.69□□□□□ -1.5
HDAC6-212ENST00000461608 ZNF330Q9Y3S2 320 aaPredicted RBP5.69□□□□□ -1.5
HDAC6-212ENST00000461608 FSHRP23945 695 aa5.68□□□□□ -1.5
HDAC6-212ENST00000461608 PTSQ03393 145 aa5.68□□□□□ -1.5
HDAC6-212ENST00000461608 CTDSPL2Q05D32 466 aa5.68□□□□□ -1.5
HDAC6-212ENST00000461608 BPHLQ86WA6 291 aaPredicted RBP5.68□□□□□ -1.5
HDAC6-212ENST00000461608 NANOS1Q8WY41 292 aaKnown RBP5.68□□□□□ -1.5
HDAC6-212ENST00000461608 DNMT3LQ9UJW3 386 aa5.68□□□□□ -1.5
HDAC6-212ENST00000461608 SOS2Q07890 1332 aaPredicted RBP5.68□□□□□ -1.5
HDAC6-212ENST00000461608 ABL2P42684 1182 aa5.67□□□□□ -1.5
HDAC6-212ENST00000461608 MEIOBQ8N635 442 aa5.67□□□□□ -1.5
HDAC6-212ENST00000461608 BEND7Q8N7W2 519 aaPredicted RBP5.67□□□□□ -1.5
HDAC6-212ENST00000461608 LRRN4Q8WUT4 740 aa5.67□□□□□ -1.5
HDAC6-212ENST00000461608 GJD4Q96KN9 370 aaPredicted RBP5.67□□□□□ -1.5
HDAC6-212ENST00000461608 ARID3AQ99856 593 aa5.67□□□□□ -1.5
HDAC6-212ENST00000461608 GDPD2Q9HCC8 539 aa5.67□□□□□ -1.5
HDAC6-212ENST00000461608 EMILIN1Q9Y6C2 1016 aa5.67□□□□□ -1.5
HDAC6-212ENST00000461608 MAGEB6P1A0A0J9YX57 407 aa5.66□□□□□ -1.5
HDAC6-212ENST00000461608 SOX11P35716 441 aa5.66□□□□□ -1.5
HDAC6-212ENST00000461608 KRT76Q01546 638 aa5.66□□□□□ -1.5
HDAC6-212ENST00000461608 CCDC155Q8N6L0 562 aa5.66□□□□□ -1.5
HDAC6-212ENST00000461608 GPR161Q8N6U8 529 aaKnown RBP5.66□□□□□ -1.5
HDAC6-212ENST00000461608 OCSTAMPQ9BR26 566 aa5.66□□□□□ -1.5
HDAC6-212ENST00000461608 CARD14Q9BXL6 1004 aa5.66□□□□□ -1.5
HDAC6-212ENST00000461608 TBC1D2BQ9UPU7 963 aa5.66□□□□□ -1.5
HDAC6-212ENST00000461608 SLURP2P0DP57 97 aa5.65□□□□□ -1.5
HDAC6-212ENST00000461608 ERFEQ4G0M1 354 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms