RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 TCP11L2Q8N4U5 519 aa14.43□□□□□ -0.1
NEDD9-206ENST00000461055 USP21Q9UK80 565 aa14.43□□□□□ -0.1
NEDD9-206ENST00000461055 NALCNQ8IZF0 1738 aa14.43□□□□□ -0.1
NEDD9-206ENST00000461055 MAPK8IP3Q9UPT6 1336 aa14.42□□□□□ -0.1
NEDD9-206ENST00000461055 OVOS2A0A0J9YW53 1432 aa14.42□□□□□ -0.1
NEDD9-206ENST00000461055 OVOS2Q6IE36 1432 aa14.42□□□□□ -0.1
NEDD9-206ENST00000461055 U2SURPO15042 1029 aaKnown RBP14.42□□□□□ -0.1
NEDD9-206ENST00000461055 DUSP27Q5VZP5 1158 aa14.42□□□□□ -0.1
NEDD9-206ENST00000461055 WWC1Q8IX03 1113 aa14.42□□□□□ -0.1
NEDD9-206ENST00000461055 CDCA7LQ96GN5 454 aa14.42□□□□□ -0.1
NEDD9-206ENST00000461055 KIF24Q5T7B8 1368 aa14.42□□□□□ -0.1
NEDD9-206ENST00000461055 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.41□□□□□ -0.1
NEDD9-206ENST00000461055 PHF8Q9UPP1 1060 aa14.41□□□□□ -0.1
NEDD9-206ENST00000461055 FOXO3O43524 673 aa14.4□□□□□ -0.1
NEDD9-206ENST00000461055 ESCO1Q5FWF5 840 aa14.4□□□□□ -0.1
NEDD9-206ENST00000461055 PLEKHF1Q96S99 279 aa14.4□□□□□ -0.1
NEDD9-206ENST00000461055 IL16Q14005 1332 aa14.4□□□□□ -0.1
NEDD9-206ENST00000461055 MAP2P11137 1827 aaKnown RBP14.39□□□□□ -0.11
NEDD9-206ENST00000461055 IL13P35225 146 aa14.39□□□□□ -0.11
NEDD9-206ENST00000461055 RRP1P56182 461 aaKnown RBP14.39□□□□□ -0.11
NEDD9-206ENST00000461055 FNBP4Q8N3X1 1017 aaPredicted RBP14.39□□□□□ -0.11
NEDD9-206ENST00000461055 PMFBP1Q8TBY8 1022 aa14.39□□□□□ -0.11
NEDD9-206ENST00000461055 MYH16Q9H6N6 1097 aa14.39□□□□□ -0.11
NEDD9-206ENST00000461055 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
NEDD9-206ENST00000461055 CALD1Q05682 793 aaKnown RBP14.38□□□□□ -0.11
NEDD9-206ENST00000461055 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
NEDD9-206ENST00000461055 CT47B1P0C2W7 299 aaPredicted RBP14.37□□□□□ -0.11
NEDD9-206ENST00000461055 TRPC5Q9UL62 973 aaPredicted RBP14.37□□□□□ -0.11
NEDD9-206ENST00000461055 TMPOP42166 694 aaKnown RBP14.36□□□□□ -0.11
NEDD9-206ENST00000461055 EMILIN1Q9Y6C2 1016 aa14.36□□□□□ -0.11
NEDD9-206ENST00000461055 USP54Q70EL1 1684 aa14.36□□□□□ -0.11
NEDD9-206ENST00000461055 SENP3-EIF4A1A0A087X0R7 540 aa14.35□□□□□ -0.11
NEDD9-206ENST00000461055 LMOD3Q0VAK6 560 aa14.35□□□□□ -0.11
NEDD9-206ENST00000461055 RSPH6AQ9H0K4 717 aa14.35□□□□□ -0.11
NEDD9-206ENST00000461055 ZRANB1Q9UGI0 708 aa14.35□□□□□ -0.11
NEDD9-206ENST00000461055 EP400Q96L91 3159 aa14.34□□□□□ -0.11
NEDD9-206ENST00000461055 PSME1Q06323 249 aa14.34□□□□□ -0.11
NEDD9-206ENST00000461055 RGPD8O14715 1765 aaPredicted RBP14.34□□□□□ -0.11
NEDD9-206ENST00000461055 SBNO1A3KN83 1393 aa14.34□□□□□ -0.11
NEDD9-206ENST00000461055 ATRNO75882 1429 aa14.33□□□□□ -0.11
NEDD9-206ENST00000461055 BCL9LQ86UU0 1499 aa14.33□□□□□ -0.12
NEDD9-206ENST00000461055 NLRP6P59044 892 aa14.33□□□□□ -0.12
NEDD9-206ENST00000461055 KCNH5Q8NCM2 988 aa14.33□□□□□ -0.12
NEDD9-206ENST00000461055 FLT4P35916 1363 aa14.33□□□□□ -0.12
NEDD9-206ENST00000461055 RRS1Q15050 365 aaKnown RBP14.32□□□□□ -0.12
NEDD9-206ENST00000461055 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
NEDD9-206ENST00000461055 ABTB2Q8N961 1025 aa14.32□□□□□ -0.12
NEDD9-206ENST00000461055 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
NEDD9-206ENST00000461055 RIPK4P57078 832 aa14.31□□□□□ -0.12
NEDD9-206ENST00000461055 IRX6P78412 446 aaPredicted RBP14.31□□□□□ -0.12
NEDD9-206ENST00000461055 NEUROD2Q15784 382 aa14.31□□□□□ -0.12
NEDD9-206ENST00000461055 CABLES1Q8TDN4 633 aa14.31□□□□□ -0.12
NEDD9-206ENST00000461055 GJD4Q96KN9 370 aaPredicted RBP14.31□□□□□ -0.12
NEDD9-206ENST00000461055 RTL1A6NKG5 1358 aa14.31□□□□□ -0.12
NEDD9-206ENST00000461055 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
NEDD9-206ENST00000461055 AMPHP49418 695 aa14.3□□□□□ -0.12
NEDD9-206ENST00000461055 RRP7AQ9Y3A4 280 aaKnown RBP14.3□□□□□ -0.12
NEDD9-206ENST00000461055 NPHP3Q7Z494 1330 aa14.3□□□□□ -0.12
NEDD9-206ENST00000461055 PXDNQ92626 1479 aa14.3□□□□□ -0.12
NEDD9-206ENST00000461055 PAK3O75914 559 aaPredicted RBP14.29□□□□□ -0.12
NEDD9-206ENST00000461055 FBLN1P23142 703 aa14.29□□□□□ -0.12
NEDD9-206ENST00000461055 EIF4A2Q14240 407 aaKnown RBP14.29□□□□□ -0.12
NEDD9-206ENST00000461055 ZNF428Q96B54 188 aa14.29□□□□□ -0.12
NEDD9-206ENST00000461055 TRIM35Q9UPQ4 493 aa14.29□□□□□ -0.12
NEDD9-206ENST00000461055 MAP3K19Q56UN5 1328 aa14.29□□□□□ -0.12
NEDD9-206ENST00000461055 ARHGEF10O15013 1369 aa14.29□□□□□ -0.12
NEDD9-206ENST00000461055 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
NEDD9-206ENST00000461055 KRT28Q7Z3Y7 464 aa14.28□□□□□ -0.12
NEDD9-206ENST00000461055 DEFB132Q7Z7B7 95 aa14.28□□□□□ -0.12
NEDD9-206ENST00000461055 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
NEDD9-206ENST00000461055 AAMPQ13685 434 aa14.27□□□□□ -0.13
NEDD9-206ENST00000461055 SPATA31A3Q5VYP0 1347 aa14.26□□□□□ -0.13
NEDD9-206ENST00000461055 MS4A1P11836 297 aa14.26□□□□□ -0.13
NEDD9-206ENST00000461055 PDE3AQ14432 1141 aa14.26□□□□□ -0.13
NEDD9-206ENST00000461055 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
NEDD9-206ENST00000461055 HMOX1P09601 288 aa14.25□□□□□ -0.13
NEDD9-206ENST00000461055 HSP90AB2PQ58FF8 381 aa14.25□□□□□ -0.13
NEDD9-206ENST00000461055 CCDC136Q96JN2 1154 aa14.25□□□□□ -0.13
NEDD9-206ENST00000461055 COL22A1Q8NFW1 1626 aaPredicted RBP14.24□□□□□ -0.13
NEDD9-206ENST00000461055 HAP1P54257 671 aaPredicted RBP14.24□□□□□ -0.13
NEDD9-206ENST00000461055 GNAI1P63096 354 aa14.24□□□□□ -0.13
NEDD9-206ENST00000461055 SULT6B1Q6IMI4 303 aa14.24□□□□□ -0.13
NEDD9-206ENST00000461055 IP6K1Q92551 441 aa14.24□□□□□ -0.13
NEDD9-206ENST00000461055 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
NEDD9-206ENST00000461055 KDRP35968 1356 aa14.23□□□□□ -0.13
NEDD9-206ENST00000461055 HTATSF1O43719 755 aaKnown RBP14.23□□□□□ -0.13
NEDD9-206ENST00000461055 HOXC9P31274 260 aa14.23□□□□□ -0.13
NEDD9-206ENST00000461055 LMOD2Q6P5Q4 547 aa14.23□□□□□ -0.13
NEDD9-206ENST00000461055 PHACTR3Q96KR7 559 aa14.23□□□□□ -0.13
NEDD9-206ENST00000461055 IGSF1Q8N6C5 1336 aa14.22□□□□□ -0.13
NEDD9-206ENST00000461055 FANCIQ9NVI1 1328 aa14.22□□□□□ -0.13
NEDD9-206ENST00000461055 RGPD1P0DJD0 1748 aa14.22□□□□□ -0.13
NEDD9-206ENST00000461055 RARSP54136 660 aaKnown RBP14.22□□□□□ -0.13
NEDD9-206ENST00000461055 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
NEDD9-206ENST00000461055 PEAK1Q9H792 1746 aa14.21□□□□□ -0.13
NEDD9-206ENST00000461055 USP19O94966 1318 aa14.21□□□□□ -0.13
NEDD9-206ENST00000461055 FAM83GA6ND36 823 aa14.21□□□□□ -0.13
NEDD9-206ENST00000461055 GAS2L2Q8NHY3 880 aa14.21□□□□□ -0.13
NEDD9-206ENST00000461055 SLIT2O94813 1529 aa14.2□□□□□ -0.14
NEDD9-206ENST00000461055 PHRF1Q9P1Y6 1649 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms