RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 ORAI2Q96SN7 254 aa10.4□□□□□ -0.74
RTN4-212ENST00000461004 KIAA1210Q9ULL0 1709 aa10.4□□□□□ -0.74
RTN4-212ENST00000461004 MST1RQ04912 1400 aa10.4□□□□□ -0.75
RTN4-212ENST00000461004 DLC1Q96QB1 1528 aa10.39□□□□□ -0.75
RTN4-212ENST00000461004 CARD11Q9BXL7 1154 aa10.39□□□□□ -0.75
RTN4-212ENST00000461004 SEMA3EO15041 775 aa10.38□□□□□ -0.75
RTN4-212ENST00000461004 BRINP3Q76B58 766 aa10.38□□□□□ -0.75
RTN4-212ENST00000461004 TIMELESSQ9UNS1 1208 aa10.38□□□□□ -0.75
RTN4-212ENST00000461004 GPRASP1Q5JY77 1395 aa10.38□□□□□ -0.75
RTN4-212ENST00000461004 C1orf167Q5SNV9 1468 aa10.37□□□□□ -0.75
RTN4-212ENST00000461004 RALGAPBQ86X10 1494 aa10.37□□□□□ -0.75
RTN4-212ENST00000461004 DCCP43146 1447 aa10.37□□□□□ -0.75
RTN4-212ENST00000461004 ARHGEF28Q8N1W1 1705 aaKnown RBP10.37□□□□□ -0.75
RTN4-212ENST00000461004 OXER1Q8TDS5 423 aa10.37□□□□□ -0.75
RTN4-212ENST00000461004 UPF1Q92900 1129 aaKnown RBP eCLIP10.36□□□□□ -0.75
RTN4-212ENST00000461004 PRR36Q9H6K5 1346 aa10.35□□□□□ -0.75
RTN4-212ENST00000461004 CENPJQ9HC77 1338 aaPredicted RBP10.35□□□□□ -0.75
RTN4-212ENST00000461004 ROBO1Q9Y6N7 1651 aa10.35□□□□□ -0.75
RTN4-212ENST00000461004 WASLO00401 505 aaPredicted RBP10.35□□□□□ -0.75
RTN4-212ENST00000461004 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
RTN4-212ENST00000461004 SLAIN1Q8ND83 568 aa10.35□□□□□ -0.75
RTN4-212ENST00000461004 OTUD5Q96G74 571 aa10.35□□□□□ -0.75
RTN4-212ENST00000461004 CDK19Q9BWU1 502 aa10.35□□□□□ -0.75
RTN4-212ENST00000461004 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
RTN4-212ENST00000461004 CDC42BPGQ6DT37 1551 aa10.34□□□□□ -0.75
RTN4-212ENST00000461004 ST20-MTHFSA0A0A6YYL1 179 aa10.33□□□□□ -0.76
RTN4-212ENST00000461004 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
RTN4-212ENST00000461004 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
RTN4-212ENST00000461004 PMFBP1Q8TBY8 1022 aa10.33□□□□□ -0.76
RTN4-212ENST00000461004 FOXO3O43524 673 aa10.32□□□□□ -0.76
RTN4-212ENST00000461004 MAMSTRQ6ZN01 415 aa10.32□□□□□ -0.76
RTN4-212ENST00000461004 NUDT16Q96DE0 195 aaKnown RBP10.32□□□□□ -0.76
RTN4-212ENST00000461004 FMN2Q9NZ56 1722 aa10.32□□□□□ -0.76
RTN4-212ENST00000461004 RGPD8O14715 1765 aaPredicted RBP10.31□□□□□ -0.76
RTN4-212ENST00000461004 SLC34A2O95436 690 aa10.31□□□□□ -0.76
RTN4-212ENST00000461004 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
RTN4-212ENST00000461004 MLLT3P42568 568 aaPredicted RBP10.31□□□□□ -0.76
RTN4-212ENST00000461004 PDIA6Q15084 440 aa10.31□□□□□ -0.76
RTN4-212ENST00000461004 LHX8Q68G74 356 aa10.31□□□□□ -0.76
RTN4-212ENST00000461004 PTCD2Q8WV60 388 aaKnown RBP10.31□□□□□ -0.76
RTN4-212ENST00000461004 TESK2Q96S53 571 aa10.31□□□□□ -0.76
RTN4-212ENST00000461004 USP32Q8NFA0 1604 aa10.31□□□□□ -0.76
RTN4-212ENST00000461004 ADGRB2O60241 1585 aa10.31□□□□□ -0.76
RTN4-212ENST00000461004 TULP4Q9NRJ4 1543 aa10.3□□□□□ -0.76
RTN4-212ENST00000461004 SRPK2P78362 688 aaKnown RBP10.3□□□□□ -0.76
RTN4-212ENST00000461004 QRICH2Q9H0J4 1663 aa10.3□□□□□ -0.76
RTN4-212ENST00000461004 USP47Q96K76 1375 aa10.29□□□□□ -0.76
RTN4-212ENST00000461004 PRKCSHP14314 528 aaPredicted RBP10.29□□□□□ -0.76
RTN4-212ENST00000461004 EIF3AQ14152 1382 aaKnown RBP10.28□□□□□ -0.76
RTN4-212ENST00000461004 PHLPP1O60346 1717 aa10.28□□□□□ -0.76
RTN4-212ENST00000461004 ANKARQ7Z5J8 1434 aa10.28□□□□□ -0.76
RTN4-212ENST00000461004 MAP3K9P80192 1104 aa10.28□□□□□ -0.76
RTN4-212ENST00000461004 ATP7BP35670 1465 aa10.28□□□□□ -0.76
RTN4-212ENST00000461004 SOS2Q07890 1332 aaPredicted RBP10.28□□□□□ -0.76
RTN4-212ENST00000461004 COL16A1Q07092 1604 aaPredicted RBP10.27□□□□□ -0.77
RTN4-212ENST00000461004 AHDC1Q5TGY3 1603 aaPredicted RBP10.27□□□□□ -0.77
RTN4-212ENST00000461004 HSPA5P11021 654 aaKnown RBP10.27□□□□□ -0.77
RTN4-212ENST00000461004 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.27□□□□□ -0.77
RTN4-212ENST00000461004 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.77
RTN4-212ENST00000461004 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
RTN4-212ENST00000461004 EVC2Q86UK5 1308 aa10.27□□□□□ -0.77
RTN4-212ENST00000461004 SPDYE16A6NNV3 312 aaPredicted RBP10.26□□□□□ -0.77
RTN4-212ENST00000461004 PCDHGA4Q9Y5G9 962 aa10.26□□□□□ -0.77
RTN4-212ENST00000461004 NHSL1Q5SYE7 1610 aa10.25□□□□□ -0.77
RTN4-212ENST00000461004 PXDNQ92626 1479 aa10.25□□□□□ -0.77
RTN4-212ENST00000461004 PLEKHG3A1L390 1219 aa10.25□□□□□ -0.77
RTN4-212ENST00000461004 PSME1Q06323 249 aa10.25□□□□□ -0.77
RTN4-212ENST00000461004 NGDNQ8NEJ9 315 aaKnown RBP10.25□□□□□ -0.77
RTN4-212ENST00000461004 ACEP12821 1306 aa10.25□□□□□ -0.77
RTN4-212ENST00000461004 NPHP3Q7Z494 1330 aa10.25□□□□□ -0.77
RTN4-212ENST00000461004 DISP3Q9P2K9 1392 aa10.25□□□□□ -0.77
RTN4-212ENST00000461004 SBNO2Q9Y2G9 1366 aa10.25□□□□□ -0.77
RTN4-212ENST00000461004 C11orf95C9JLR9 678 aaPredicted RBP10.24□□□□□ -0.77
RTN4-212ENST00000461004 EVI5O60447 810 aa10.24□□□□□ -0.77
RTN4-212ENST00000461004 KHSRPQ92945 711 aaKnown RBP eCLIP10.24□□□□□ -0.77
RTN4-212ENST00000461004 LRRC59Q96AG4 307 aaKnown RBP10.24□□□□□ -0.77
RTN4-212ENST00000461004 SLC12A5Q9H2X9 1139 aa10.24□□□□□ -0.77
RTN4-212ENST00000461004 PPIP5K1Q6PFW1 1433 aa10.24□□□□□ -0.77
RTN4-212ENST00000461004 NUTM2BA6NNL0 878 aaPredicted RBP10.23□□□□□ -0.77
RTN4-212ENST00000461004 NUTM2EB1AL46 878 aaPredicted RBP10.23□□□□□ -0.77
RTN4-212ENST00000461004 EIF4G2P78344 907 aaKnown RBP eCLIP10.23□□□□□ -0.77
RTN4-212ENST00000461004 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
RTN4-212ENST00000461004 NUTM2AQ8IVF1 878 aaPredicted RBP10.23□□□□□ -0.77
RTN4-212ENST00000461004 PNPLA6Q8IY17 1366 aa10.23□□□□□ -0.77
RTN4-212ENST00000461004 JCADQ9P266 1359 aa10.23□□□□□ -0.77
RTN4-212ENST00000461004 LMOD2Q6P5Q4 547 aa10.22□□□□□ -0.77
RTN4-212ENST00000461004 TMC1Q8TDI8 760 aa10.22□□□□□ -0.77
RTN4-212ENST00000461004 CABLES1Q8TDN4 633 aa10.22□□□□□ -0.77
RTN4-212ENST00000461004 SPATA31A3Q5VYP0 1347 aa10.22□□□□□ -0.77
RTN4-212ENST00000461004 KIF1AQ12756 1690 aa10.22□□□□□ -0.77
RTN4-212ENST00000461004 TOPAZ1Q8N9V7 1692 aa10.22□□□□□ -0.77
RTN4-212ENST00000461004 TMF1P82094 1093 aa10.21□□□□□ -0.77
RTN4-212ENST00000461004 NUTM2GQ5VZR2 741 aa10.21□□□□□ -0.77
RTN4-212ENST00000461004 POLR3AO14802 1390 aaPredicted RBP10.21□□□□□ -0.78
RTN4-212ENST00000461004 LRP6O75581 1613 aa10.21□□□□□ -0.78
RTN4-212ENST00000461004 ARSIQ5FYB1 569 aa10.2□□□□□ -0.78
RTN4-212ENST00000461004 GPR153Q6NV75 609 aa10.2□□□□□ -0.78
RTN4-212ENST00000461004 ANO8Q9HCE9 1232 aaPredicted RBP10.2□□□□□ -0.78
RTN4-212ENST00000461004 SBNO1A3KN83 1393 aa10.19□□□□□ -0.78
RTN4-212ENST00000461004 ATAD2Q6PL18 1390 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms