RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 ELL2O00472 640 aaPredicted RBP15.11■□□□□ 0.01
GCOM1-203ENST00000460962 TSPYL6Q8N831 410 aa15.11■□□□□ 0.01
GCOM1-203ENST00000460962 PTCH1Q13635 1447 aa15.11■□□□□ 0.01
GCOM1-203ENST00000460962 HSP90AA1P07900 732 aaKnown RBP15.11■□□□□ 0.01
GCOM1-203ENST00000460962 DDIT3P35638 169 aa15.11■□□□□ 0.01
GCOM1-203ENST00000460962 PANK2Q9BZ23 570 aa15.11■□□□□ 0.01
GCOM1-203ENST00000460962 IFT57Q9NWB7 429 aa15.11■□□□□ 0.01
GCOM1-203ENST00000460962 RICTORQ6R327 1708 aa15.11■□□□□ 0.01
GCOM1-203ENST00000460962 PIK3R4Q99570 1358 aa15.1■□□□□ 0.01
GCOM1-203ENST00000460962 MRE11P49959 708 aa15.1■□□□□ 0.01
GCOM1-203ENST00000460962 CIZ1Q9ULV3 898 aaPredicted RBP15.1■□□□□ 0.01
GCOM1-203ENST00000460962 ATP7BP35670 1465 aa15.1■□□□□ 0.01
GCOM1-203ENST00000460962 EMILIN1Q9Y6C2 1016 aa15.1■□□□□ 0.01
GCOM1-203ENST00000460962 WAPLQ7Z5K2 1190 aa15.09■□□□□ 0.01
GCOM1-203ENST00000460962 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
GCOM1-203ENST00000460962 TNPO1Q92973 898 aaKnown RBP15.09■□□□□ 0.01
GCOM1-203ENST00000460962 GBP4Q96PP9 640 aa15.09■□□□□ 0.01
GCOM1-203ENST00000460962 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0.01
GCOM1-203ENST00000460962 TBC1D9Q6ZT07 1266 aa15.08■□□□□ 0.01
GCOM1-203ENST00000460962 ABCC4O15439 1325 aa15.08■□□□□ 0
GCOM1-203ENST00000460962 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0
GCOM1-203ENST00000460962 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
GCOM1-203ENST00000460962 KIF2CQ99661 725 aa15.07■□□□□ 0
GCOM1-203ENST00000460962 ZNF853P0CG23 659 aa15.07■□□□□ 0
GCOM1-203ENST00000460962 IL13P35225 146 aa15.07■□□□□ 0
GCOM1-203ENST00000460962 SIRT2Q8IXJ6 389 aa15.07■□□□□ 0
GCOM1-203ENST00000460962 API5Q9BZZ5 524 aaKnown RBP15.06■□□□□ 0
GCOM1-203ENST00000460962 RAB3GAP1Q15042 981 aa15.06■□□□□ 0
GCOM1-203ENST00000460962 GRPEL1Q9HAV7 217 aa15.06■□□□□ 0
GCOM1-203ENST00000460962 ISY1Q9ULR0 285 aaKnown RBP15.06■□□□□ 0
GCOM1-203ENST00000460962 K7ELQ4 463 aaPredicted RBP15.06■□□□□ 0
GCOM1-203ENST00000460962 CFAP44Q96MT7 982 aa15.06■□□□□ 0
GCOM1-203ENST00000460962 NME9Q86XW9 330 aa15.05■□□□□ -0
GCOM1-203ENST00000460962 FOXD4L1Q9NU39 408 aa15.05■□□□□ -0
GCOM1-203ENST00000460962 EDC4Q6P2E9 1401 aaKnown RBP15.05■□□□□ -0
GCOM1-203ENST00000460962 CDC45O75419 566 aa15.05■□□□□ -0
GCOM1-203ENST00000460962 CD2BP2O95400 341 aaKnown RBP15.05■□□□□ -0
GCOM1-203ENST00000460962 C8orf58Q8NAV2 365 aa15.05■□□□□ -0
GCOM1-203ENST00000460962 DLC1Q96QB1 1528 aa15.04■□□□□ -0
GCOM1-203ENST00000460962 CDK12Q9NYV4 1490 aaPredicted RBP15.04■□□□□ -0
GCOM1-203ENST00000460962 PRKCSHP14314 528 aaPredicted RBP15.04■□□□□ -0
GCOM1-203ENST00000460962 PTMSP20962 102 aa15.04■□□□□ -0
GCOM1-203ENST00000460962 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
GCOM1-203ENST00000460962 RBM42Q9BTD8 480 aaKnown RBP15.03■□□□□ -0
GCOM1-203ENST00000460962 COG3Q96JB2 828 aa15.02■□□□□ -0
GCOM1-203ENST00000460962 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
GCOM1-203ENST00000460962 RIMS2Q9UQ26 1411 aa15.02■□□□□ -0
GCOM1-203ENST00000460962 FAM83GA6ND36 823 aa15.02□□□□□ -0.01
GCOM1-203ENST00000460962 CPSF1Q10570 1443 aaKnown RBP15.02□□□□□ -0.01
GCOM1-203ENST00000460962 REREQ9P2R6 1566 aa15.02□□□□□ -0.01
GCOM1-203ENST00000460962 WASLO00401 505 aaPredicted RBP15.01□□□□□ -0.01
GCOM1-203ENST00000460962 RRS1Q15050 365 aaKnown RBP15.01□□□□□ -0.01
GCOM1-203ENST00000460962 AATKQ6ZMQ8 1374 aa15.01□□□□□ -0.01
GCOM1-203ENST00000460962 GSPT1P15170 499 aaKnown RBP15□□□□□ -0.01
GCOM1-203ENST00000460962 DCTN1Q14203 1278 aa15□□□□□ -0.01
GCOM1-203ENST00000460962 CLCN1P35523 988 aa15□□□□□ -0.01
GCOM1-203ENST00000460962 PLEKHM2Q8IWE5 1019 aa15□□□□□ -0.01
GCOM1-203ENST00000460962 DLG5Q8TDM6 1919 aa15□□□□□ -0.01
GCOM1-203ENST00000460962 KIF24Q5T7B8 1368 aa15□□□□□ -0.01
GCOM1-203ENST00000460962 GOLGA6L22H0YM25 854 aa14.99□□□□□ -0.01
GCOM1-203ENST00000460962 GAS2L2Q8NHY3 880 aa14.99□□□□□ -0.01
GCOM1-203ENST00000460962 A2ML1A8K2U0 1454 aa14.99□□□□□ -0.01
GCOM1-203ENST00000460962 DCTPP1Q9H773 170 aa14.99□□□□□ -0.01
GCOM1-203ENST00000460962 SSFA2P28290 1259 aa14.98□□□□□ -0.01
GCOM1-203ENST00000460962 NUDT16Q96DE0 195 aaKnown RBP14.98□□□□□ -0.01
GCOM1-203ENST00000460962 RABEP1Q15276 862 aa14.97□□□□□ -0.01
GCOM1-203ENST00000460962 TTC22Q5TAA0 569 aa14.97□□□□□ -0.01
GCOM1-203ENST00000460962 RIMBP3CA6NJZ7 1639 aa14.97□□□□□ -0.01
GCOM1-203ENST00000460962 RIMBP3BA6NNM3 1639 aa14.97□□□□□ -0.01
GCOM1-203ENST00000460962 RIMBP3Q9UFD9 1639 aa14.97□□□□□ -0.01
GCOM1-203ENST00000460962 HAP1P54257 671 aaPredicted RBP14.97□□□□□ -0.01
GCOM1-203ENST00000460962 GAS2L3Q86XJ1 694 aa14.97□□□□□ -0.01
GCOM1-203ENST00000460962 INTS3Q68E01 1043 aaKnown RBP14.97□□□□□ -0.01
GCOM1-203ENST00000460962 CCDC61Q9Y6R9 512 aa14.97□□□□□ -0.01
GCOM1-203ENST00000460962 TXNDC2Q86VQ3 553 aa14.96□□□□□ -0.01
GCOM1-203ENST00000460962 TRIM44Q96DX7 344 aaPredicted RBP14.96□□□□□ -0.01
GCOM1-203ENST00000460962 NCKAP5LQ9HCH0 1330 aa14.96□□□□□ -0.01
GCOM1-203ENST00000460962 KNDC1Q76NI1 1749 aa14.96□□□□□ -0.01
GCOM1-203ENST00000460962 NAP1L5Q96NT1 182 aaPredicted RBP14.96□□□□□ -0.01
GCOM1-203ENST00000460962 SETD1AO15047 1707 aaKnown RBP14.96□□□□□ -0.02
GCOM1-203ENST00000460962 ANKRD44Q8N8A2 993 aa14.95□□□□□ -0.02
GCOM1-203ENST00000460962 CPS1P31327 1500 aa14.95□□□□□ -0.02
GCOM1-203ENST00000460962 C16orf71Q8IYS4 520 aaPredicted RBP14.95□□□□□ -0.02
GCOM1-203ENST00000460962 RPAP2Q8IXW5 612 aaPredicted RBP14.95□□□□□ -0.02
GCOM1-203ENST00000460962 ESPNB1AK53 854 aa14.94□□□□□ -0.02
GCOM1-203ENST00000460962 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
GCOM1-203ENST00000460962 SULT6B1Q6IMI4 303 aa14.94□□□□□ -0.02
GCOM1-203ENST00000460962 CASC1Q6TDU7 716 aa14.94□□□□□ -0.02
GCOM1-203ENST00000460962 AEBP1Q8IUX7 1158 aa14.94□□□□□ -0.02
GCOM1-203ENST00000460962 METP08581 1390 aa14.94□□□□□ -0.02
GCOM1-203ENST00000460962 BAG4O95429 457 aaKnown RBP14.93□□□□□ -0.02
GCOM1-203ENST00000460962 KRT24Q2M2I5 525 aa14.93□□□□□ -0.02
GCOM1-203ENST00000460962 CLEC17AQ6ZS10 378 aa14.93□□□□□ -0.02
GCOM1-203ENST00000460962 DDX49Q9Y6V7 483 aaKnown RBP14.93□□□□□ -0.02
GCOM1-203ENST00000460962 ATP10DQ9P241 1426 aa14.93□□□□□ -0.02
GCOM1-203ENST00000460962 CEP85Q6P2H3 762 aa14.93□□□□□ -0.02
GCOM1-203ENST00000460962 USP26Q9BXU7 913 aa14.93□□□□□ -0.02
GCOM1-203ENST00000460962 APBB1O00213 710 aa14.93□□□□□ -0.02
GCOM1-203ENST00000460962 OTUD7AQ8TE49 926 aaPredicted RBP14.93□□□□□ -0.02
GCOM1-203ENST00000460962 KLHL40Q2TBA0 621 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms