RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 PNNQ9H307 717 aaKnown RBP11.85□□□□□ -0.51
CDC42EP3-204ENST00000457889 POLKQ9UBT6 870 aa11.85□□□□□ -0.51
CDC42EP3-204ENST00000457889 TRPM3Q9HCF6 1732 aaPredicted RBP11.85□□□□□ -0.51
CDC42EP3-204ENST00000457889 RTL1A6NKG5 1358 aa11.84□□□□□ -0.51
CDC42EP3-204ENST00000457889 NLRP6P59044 892 aa11.84□□□□□ -0.51
CDC42EP3-204ENST00000457889 ABTB2Q8N961 1025 aa11.84□□□□□ -0.51
CDC42EP3-204ENST00000457889 KCNH5Q8NCM2 988 aa11.84□□□□□ -0.51
CDC42EP3-204ENST00000457889 ADAMTS8Q9UP79 889 aa11.84□□□□□ -0.51
CDC42EP3-204ENST00000457889 LTBP4Q8N2S1 1624 aa11.84□□□□□ -0.51
CDC42EP3-204ENST00000457889 MAP2P11137 1827 aaKnown RBP11.83□□□□□ -0.51
CDC42EP3-204ENST00000457889 FOXO3O43524 673 aa11.83□□□□□ -0.52
CDC42EP3-204ENST00000457889 DIAPH1O60610 1272 aaKnown RBP11.83□□□□□ -0.52
CDC42EP3-204ENST00000457889 SLAIN2Q9P270 581 aa11.83□□□□□ -0.52
CDC42EP3-204ENST00000457889 ARHGEF10O15013 1369 aa11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 FLT4P35916 1363 aa11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 SLIT3O75094 1523 aa11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 PDE3BQ13370 1112 aa11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 KRT28Q7Z3Y7 464 aa11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 MARF1Q9Y4F3 1742 aaKnown RBP11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 USP19O94966 1318 aa11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 PXDNQ92626 1479 aa11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 PHRF1Q9P1Y6 1649 aaKnown RBP11.82□□□□□ -0.52
CDC42EP3-204ENST00000457889 ALS2Q96Q42 1657 aa11.81□□□□□ -0.52
CDC42EP3-204ENST00000457889 MED1Q15648 1581 aaPredicted RBP11.81□□□□□ -0.52
CDC42EP3-204ENST00000457889 TNS3Q68CZ2 1445 aa11.81□□□□□ -0.52
CDC42EP3-204ENST00000457889 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
CDC42EP3-204ENST00000457889 BRINP3Q76B58 766 aa11.8□□□□□ -0.52
CDC42EP3-204ENST00000457889 RUNDC1Q96C34 613 aa11.8□□□□□ -0.52
CDC42EP3-204ENST00000457889 IQSEC2Q5JU85 1478 aa11.8□□□□□ -0.52
CDC42EP3-204ENST00000457889 NFAT5O94916 1531 aa11.8□□□□□ -0.52
CDC42EP3-204ENST00000457889 FCHSD2O94868 740 aa11.79□□□□□ -0.52
CDC42EP3-204ENST00000457889 U2AF1L5P0DN76 240 aaPredicted RBP11.79□□□□□ -0.52
CDC42EP3-204ENST00000457889 U2AF1Q01081 240 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDC42EP3-204ENST00000457889 EMILIN1Q9Y6C2 1016 aa11.79□□□□□ -0.52
CDC42EP3-204ENST00000457889 ABCC6O95255 1503 aa11.79□□□□□ -0.52
CDC42EP3-204ENST00000457889 MAP3K19Q56UN5 1328 aa11.79□□□□□ -0.52
CDC42EP3-204ENST00000457889 PPM1GO15355 546 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-204ENST00000457889 SOS2Q07890 1332 aaPredicted RBP11.78□□□□□ -0.52
CDC42EP3-204ENST00000457889 NHSL1Q5SYE7 1610 aa11.78□□□□□ -0.52
CDC42EP3-204ENST00000457889 NEFMP07197 916 aa11.77□□□□□ -0.53
CDC42EP3-204ENST00000457889 IL13P35225 146 aa11.77□□□□□ -0.53
CDC42EP3-204ENST00000457889 RRS1Q15050 365 aaKnown RBP11.77□□□□□ -0.53
CDC42EP3-204ENST00000457889 SPATA31A3Q5VYP0 1347 aa11.77□□□□□ -0.53
CDC42EP3-204ENST00000457889 U2SURPO15042 1029 aaKnown RBP11.76□□□□□ -0.53
CDC42EP3-204ENST00000457889 AMPHP49418 695 aa11.76□□□□□ -0.53
CDC42EP3-204ENST00000457889 CCDC27Q2M243 656 aa11.76□□□□□ -0.53
CDC42EP3-204ENST00000457889 PEAK1Q9H792 1746 aa11.76□□□□□ -0.53
CDC42EP3-204ENST00000457889 GCP02774 474 aa11.75□□□□□ -0.53
CDC42EP3-204ENST00000457889 MAPK8IP3Q9UPT6 1336 aa11.75□□□□□ -0.53
CDC42EP3-204ENST00000457889 AHDC1Q5TGY3 1603 aaPredicted RBP11.75□□□□□ -0.53
CDC42EP3-204ENST00000457889 RGPD1P0DJD0 1748 aa11.74□□□□□ -0.53
CDC42EP3-204ENST00000457889 IP6K1Q92551 441 aa11.74□□□□□ -0.53
CDC42EP3-204ENST00000457889 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
CDC42EP3-204ENST00000457889 CPDO75976 1380 aa11.74□□□□□ -0.53
CDC42EP3-204ENST00000457889 APAF1O14727 1248 aa11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 LTN1O94822 1766 aa11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 HOXC9P31274 260 aa11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 KDRP35968 1356 aa11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 XPCQ01831 940 aaPredicted RBP11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 EIF4A2Q14240 407 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 ARHGEF25Q86VW2 580 aa11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 PLEKHF1Q96S99 279 aa11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 RSPH6AQ9H0K4 717 aa11.73□□□□□ -0.53
CDC42EP3-204ENST00000457889 PLEKHG2Q9H7P9 1386 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 IGSF1Q8N6C5 1336 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 FBLN1P23142 703 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 HSP90AB2PQ58FF8 381 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 NUTM2GQ5VZR2 741 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 LMOD2Q6P5Q4 547 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 TCP11L2Q8N4U5 519 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 DCBLD2Q96PD2 775 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 CRYBG1Q9Y4K1 1723 aa11.72□□□□□ -0.53
CDC42EP3-204ENST00000457889 SOX12O15370 315 aa11.71□□□□□ -0.53
CDC42EP3-204ENST00000457889 TOM1O60784 492 aa11.71□□□□□ -0.53
CDC42EP3-204ENST00000457889 GOLGA2Q08379 1002 aa11.71□□□□□ -0.53
CDC42EP3-204ENST00000457889 CCDC146Q8IYE0 955 aa11.71□□□□□ -0.53
CDC42EP3-204ENST00000457889 ROBO1Q9Y6N7 1651 aa11.71□□□□□ -0.54
CDC42EP3-204ENST00000457889 LMOD3Q0VAK6 560 aa11.7□□□□□ -0.54
CDC42EP3-204ENST00000457889 WDR63Q8IWG1 891 aa11.7□□□□□ -0.54
CDC42EP3-204ENST00000457889 E9PSI1 815 aa11.69□□□□□ -0.54
CDC42EP3-204ENST00000457889 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
CDC42EP3-204ENST00000457889 CALD1Q05682 793 aaKnown RBP11.69□□□□□ -0.54
CDC42EP3-204ENST00000457889 LRRC59Q96AG4 307 aaKnown RBP11.69□□□□□ -0.54
CDC42EP3-204ENST00000457889 NCAPD2Q15021 1401 aa11.69□□□□□ -0.54
CDC42EP3-204ENST00000457889 IL16Q14005 1332 aa11.68□□□□□ -0.54
CDC42EP3-204ENST00000457889 TMPOP42166 694 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-204ENST00000457889 WWC1Q8IX03 1113 aa11.68□□□□□ -0.54
CDC42EP3-204ENST00000457889 FAM208AQ9UK61 1670 aaKnown RBP11.68□□□□□ -0.54
CDC42EP3-204ENST00000457889 NFE2L2Q16236 605 aa11.67□□□□□ -0.54
CDC42EP3-204ENST00000457889 SULT6B1Q6IMI4 303 aa11.67□□□□□ -0.54
CDC42EP3-204ENST00000457889 DDX17Q92841 729 aaKnown RBP11.67□□□□□ -0.54
CDC42EP3-204ENST00000457889 PHF12Q96QT6 1004 aa11.67□□□□□ -0.54
CDC42EP3-204ENST00000457889 CAMTA1Q9Y6Y1 1673 aa11.67□□□□□ -0.54
CDC42EP3-204ENST00000457889 COL22A1Q8NFW1 1626 aaPredicted RBP11.67□□□□□ -0.54
CDC42EP3-204ENST00000457889 HMOX1P09601 288 aa11.66□□□□□ -0.54
CDC42EP3-204ENST00000457889 EYA1Q99502 592 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms