RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ARHGAP23Q9P227 1491 aa15.85■□□□□ 0.13
LINC00959-201ENST00000456581 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
LINC00959-201ENST00000456581 TTC21BQ7Z4L5 1316 aa15.84■□□□□ 0.13
LINC00959-201ENST00000456581 EIF5BO60841 1220 aaKnown RBP15.84■□□□□ 0.13
LINC00959-201ENST00000456581 SLIT1O75093 1534 aa15.84■□□□□ 0.13
LINC00959-201ENST00000456581 IL13P35225 146 aa15.84■□□□□ 0.13
LINC00959-201ENST00000456581 LRRC7Q96NW7 1537 aa15.83■□□□□ 0.12
LINC00959-201ENST00000456581 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 ZNF692Q9BU19 519 aaPredicted RBP15.82■□□□□ 0.12
LINC00959-201ENST00000456581 MYH16Q9H6N6 1097 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 FCHSD2O94868 740 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 PDZRN3Q9UPQ7 1066 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 MON2Q7Z3U7 1717 aa15.82■□□□□ 0.12
LINC00959-201ENST00000456581 RGPD8O14715 1765 aaPredicted RBP15.81■□□□□ 0.12
LINC00959-201ENST00000456581 AEBP1Q8IUX7 1158 aa15.81■□□□□ 0.12
LINC00959-201ENST00000456581 PLEKHG3A1L390 1219 aa15.81■□□□□ 0.12
LINC00959-201ENST00000456581 NUTM2GQ5VZR2 741 aa15.81■□□□□ 0.12
LINC00959-201ENST00000456581 AKAP12Q02952 1782 aa15.8■□□□□ 0.12
LINC00959-201ENST00000456581 ITSN1Q15811 1721 aa15.8■□□□□ 0.12
LINC00959-201ENST00000456581 HSP90AB2PQ58FF8 381 aa15.79■□□□□ 0.12
LINC00959-201ENST00000456581 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
LINC00959-201ENST00000456581 FAM83GA6ND36 823 aa15.79■□□□□ 0.12
LINC00959-201ENST00000456581 USP6P35125 1406 aa15.79■□□□□ 0.12
LINC00959-201ENST00000456581 SETD1BQ9UPS6 1966 aaKnown RBP15.78■□□□□ 0.12
LINC00959-201ENST00000456581 DCTN1Q14203 1278 aa15.78■□□□□ 0.12
LINC00959-201ENST00000456581 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
LINC00959-201ENST00000456581 GZF1Q9H116 711 aaPredicted RBP15.77■□□□□ 0.12
LINC00959-201ENST00000456581 EIF4A2Q14240 407 aaKnown RBP15.77■□□□□ 0.11
LINC00959-201ENST00000456581 AATKQ6ZMQ8 1374 aa15.77■□□□□ 0.11
LINC00959-201ENST00000456581 CEP170BQ9Y4F5 1589 aaPredicted RBP15.77■□□□□ 0.11
LINC00959-201ENST00000456581 SMC4Q9NTJ3 1288 aa15.76■□□□□ 0.11
LINC00959-201ENST00000456581 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
LINC00959-201ENST00000456581 ELL2O00472 640 aaPredicted RBP15.76■□□□□ 0.11
LINC00959-201ENST00000456581 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
LINC00959-201ENST00000456581 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
LINC00959-201ENST00000456581 SULT6B1Q6IMI4 303 aa15.75■□□□□ 0.11
LINC00959-201ENST00000456581 TOPAZ1Q8N9V7 1692 aa15.75■□□□□ 0.11
LINC00959-201ENST00000456581 TBC1D2Q9BYX2 928 aa15.75■□□□□ 0.11
LINC00959-201ENST00000456581 DIP2AQ14689 1571 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 PTCH1Q13635 1447 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 LMTK3Q96Q04 1460 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 PNNQ9H307 717 aaKnown RBP15.74■□□□□ 0.11
LINC00959-201ENST00000456581 OVOS2A0A0J9YW53 1432 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 OVOS2Q6IE36 1432 aa15.74■□□□□ 0.11
LINC00959-201ENST00000456581 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
LINC00959-201ENST00000456581 ANKLE2Q86XL3 938 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 TSPYL6Q8N831 410 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 RRAGDQ9NQL2 400 aaPredicted RBP15.73■□□□□ 0.11
LINC00959-201ENST00000456581 PLEKHG5O94827 1062 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 ANTXR1Q9H6X2 564 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 NRKQ7Z2Y5 1582 aa15.73■□□□□ 0.11
LINC00959-201ENST00000456581 MFAP1P55081 439 aaKnown RBP15.72■□□□□ 0.11
LINC00959-201ENST00000456581 MAP3K19Q56UN5 1328 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 SSH2Q76I76 1423 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 FTSJ3Q8IY81 847 aaKnown RBP15.72■□□□□ 0.11
LINC00959-201ENST00000456581 PANK2Q9BZ23 570 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 TRIM27P14373 513 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 TBC1D32Q96NH3 1257 aa15.72■□□□□ 0.11
LINC00959-201ENST00000456581 NOB1Q9ULX3 412 aaKnown RBP15.72■□□□□ 0.11
LINC00959-201ENST00000456581 AEBP2Q6ZN18 517 aaPredicted RBP15.71■□□□□ 0.11
LINC00959-201ENST00000456581 NLRP6P59044 892 aa15.71■□□□□ 0.1
LINC00959-201ENST00000456581 MVPQ14764 893 aaKnown RBP15.71■□□□□ 0.1
LINC00959-201ENST00000456581 ZKSCAN2Q63HK3 967 aa15.71■□□□□ 0.1
LINC00959-201ENST00000456581 C14orf37Q86TY3 774 aa15.71■□□□□ 0.1
LINC00959-201ENST00000456581 XRN1Q8IZH2 1706 aaKnown RBP15.7■□□□□ 0.1
LINC00959-201ENST00000456581 PEAK1Q9H792 1746 aa15.7■□□□□ 0.1
LINC00959-201ENST00000456581 ITPRIPQ8IWB1 547 aa15.7■□□□□ 0.1
LINC00959-201ENST00000456581 IL16Q14005 1332 aa15.7■□□□□ 0.1
LINC00959-201ENST00000456581 BECN1Q14457 450 aa15.7■□□□□ 0.1
LINC00959-201ENST00000456581 DLG5Q8TDM6 1919 aa15.69■□□□□ 0.1
LINC00959-201ENST00000456581 MBIPQ9NS73 344 aa15.69■□□□□ 0.1
LINC00959-201ENST00000456581 DZIP1LQ8IYY4 767 aaKnown RBP15.69■□□□□ 0.1
LINC00959-201ENST00000456581 FOXO3O43524 673 aa15.68■□□□□ 0.1
LINC00959-201ENST00000456581 MCM10Q7L590 875 aa15.68■□□□□ 0.1
LINC00959-201ENST00000456581 RWDD1Q9H446 243 aaPredicted RBP15.68■□□□□ 0.1
LINC00959-201ENST00000456581 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
LINC00959-201ENST00000456581 UPF2Q9HAU5 1272 aaKnown RBP15.67■□□□□ 0.1
LINC00959-201ENST00000456581 XPCQ01831 940 aaPredicted RBP15.67■□□□□ 0.1
LINC00959-201ENST00000456581 ABTB2Q8N961 1025 aa15.67■□□□□ 0.1
LINC00959-201ENST00000456581 USP31Q70CQ4 1352 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 ATF7IPQ6VMQ6 1270 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 C8orf58Q8NAV2 365 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 AMPHP49418 695 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 TMEM57Q8N5G2 664 aa15.66■□□□□ 0.1
LINC00959-201ENST00000456581 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
LINC00959-201ENST00000456581 VAMP4O75379 141 aa15.65■□□□□ 0.1
LINC00959-201ENST00000456581 TTC21AQ8NDW8 1320 aa15.65■□□□□ 0.1
LINC00959-201ENST00000456581 CT47B1P0C2W7 299 aaPredicted RBP15.65■□□□□ 0.1
LINC00959-201ENST00000456581 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
LINC00959-201ENST00000456581 ZNF853P0CG23 659 aa15.64■□□□□ 0.09
LINC00959-201ENST00000456581 ESCO1Q5FWF5 840 aa15.64■□□□□ 0.09
LINC00959-201ENST00000456581 PIK3C2AO00443 1686 aa15.64■□□□□ 0.09
LINC00959-201ENST00000456581 XRCC6P12956 609 aaKnown RBP eCLIP15.63■□□□□ 0.09
LINC00959-201ENST00000456581 EYA1Q99502 592 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 GNAI1P63096 354 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 C22orf23Q9BZE7 217 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 C1orf115Q9H7X2 142 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 IFT57Q9NWB7 429 aa15.63■□□□□ 0.09
LINC00959-201ENST00000456581 NALCNQ8IZF0 1738 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms