RNA–Protein interactions for RNA: ENST00000456297.6

DNMT3B-206, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-206ENST00000456297 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 RWDD1Q9H446 243 aaPredicted RBP17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 SLAIN2Q9P270 581 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 ATP7BP35670 1465 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 TRIM27P14373 513 aa17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 DZIP1LQ8IYY4 767 aaKnown RBP17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 MST1RQ04912 1400 aa17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 PIP4K2BP78356 416 aa17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 SSH1Q8WYL5 1049 aa17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 A0A1W2PP64 1363 aa17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 C1orf167Q5SNV9 1468 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 DCCP43146 1447 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 NSD2O96028 1365 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
DNMT3B-206ENST00000456297 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
DNMT3B-206ENST00000456297 FOXO3O43524 673 aa17.05■□□□□ 0.32
DNMT3B-206ENST00000456297 PUS7Q96PZ0 661 aaKnown RBP17.05■□□□□ 0.32
DNMT3B-206ENST00000456297 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
DNMT3B-206ENST00000456297 NGDNQ8NEJ9 315 aaKnown RBP17.04■□□□□ 0.32
DNMT3B-206ENST00000456297 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
DNMT3B-206ENST00000456297 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
DNMT3B-206ENST00000456297 ACEP12821 1306 aa17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 ANKARQ7Z5J8 1434 aa17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 MFAP1P55081 439 aaKnown RBP17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 TOM1O60784 492 aa17.02■□□□□ 0.32
DNMT3B-206ENST00000456297 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
DNMT3B-206ENST00000456297 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
DNMT3B-206ENST00000456297 FYB1O15117 783 aa17.02■□□□□ 0.31
DNMT3B-206ENST00000456297 TMEM57Q8N5G2 664 aa17.02■□□□□ 0.31
DNMT3B-206ENST00000456297 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.31
DNMT3B-206ENST00000456297 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
DNMT3B-206ENST00000456297 TOPAZ1Q8N9V7 1692 aa17.01■□□□□ 0.31
DNMT3B-206ENST00000456297 PLEKHG3A1L390 1219 aa17.01■□□□□ 0.31
DNMT3B-206ENST00000456297 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
DNMT3B-206ENST00000456297 SMC5Q8IY18 1101 aa16.99■□□□□ 0.31
DNMT3B-206ENST00000456297 DDX19BQ9UMR2 479 aa16.99■□□□□ 0.31
DNMT3B-206ENST00000456297 RIPK4P57078 832 aa16.99■□□□□ 0.31
DNMT3B-206ENST00000456297 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
DNMT3B-206ENST00000456297 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 PSME1Q06323 249 aa16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 ITSN1Q15811 1721 aa16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 FBLN1P23142 703 aa16.97■□□□□ 0.31
DNMT3B-206ENST00000456297 ARXQ96QS3 562 aa16.97■□□□□ 0.31
DNMT3B-206ENST00000456297 FAM43AQ8N2R8 423 aa16.97■□□□□ 0.31
DNMT3B-206ENST00000456297 MCM4P33991 863 aa16.96■□□□□ 0.31
DNMT3B-206ENST00000456297 ROBO1Q9Y6N7 1651 aa16.96■□□□□ 0.31
DNMT3B-206ENST00000456297 CPSF1Q10570 1443 aaKnown RBP16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 IL16Q14005 1332 aa16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 NUTM2GQ5VZR2 741 aa16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 KRT28Q7Z3Y7 464 aa16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
DNMT3B-206ENST00000456297 LNPKQ9C0E8 428 aa16.94■□□□□ 0.3
DNMT3B-206ENST00000456297 PNPLA6Q8IY17 1366 aa16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 DIAPH1O60610 1272 aaKnown RBP16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 RRAGDQ9NQL2 400 aaPredicted RBP16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 USP6P35125 1406 aa16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
DNMT3B-206ENST00000456297 NUCB1Q02818 461 aa16.92■□□□□ 0.3
DNMT3B-206ENST00000456297 NPHP3Q7Z494 1330 aa16.92■□□□□ 0.3
DNMT3B-206ENST00000456297 NME9Q86XW9 330 aa16.92■□□□□ 0.3
DNMT3B-206ENST00000456297 FSD2A1L4K1 749 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 PANK2Q9BZ23 570 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 CHMP5Q9NZZ3 219 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 KIF16BQ96L93 1317 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 PRKCSHP14314 528 aaPredicted RBP16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 KIF1AQ12756 1690 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 TTC21BQ7Z4L5 1316 aa16.9■□□□□ 0.3
DNMT3B-206ENST00000456297 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
DNMT3B-206ENST00000456297 DDIT3P35638 169 aa16.89■□□□□ 0.29
DNMT3B-206ENST00000456297 L1TD1Q5T7N2 865 aaKnown RBP16.89■□□□□ 0.29
DNMT3B-206ENST00000456297 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
DNMT3B-206ENST00000456297 C1orf115Q9H7X2 142 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms