RNA–Protein interactions for RNA: ENST00000456297.6

DNMT3B-206, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 2 BASIC

Gene DNMT3B, Length 2,315 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-206ENST00000456297 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 RWDD1Q9H446 243 aaPredicted RBP17.12■□□□□ 0.33
DNMT3B-206ENST00000456297 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 ZKSCAN2Q63HK3 967 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 PLEKHF1Q96S99 279 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 SLAIN2Q9P270 581 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 ATP7BP35670 1465 aa17.1■□□□□ 0.33
DNMT3B-206ENST00000456297 TRIM27P14373 513 aa17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 DZIP1LQ8IYY4 767 aaKnown RBP17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
DNMT3B-206ENST00000456297 MST1RQ04912 1400 aa17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 PIP4K2BP78356 416 aa17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 SSH1Q8WYL5 1049 aa17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 DDX17Q92841 729 aaKnown RBP17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 GGNBP2Q9H3C7 697 aa17.08■□□□□ 0.33
DNMT3B-206ENST00000456297 A0A1W2PP64 1363 aa17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 PPIP5K1Q6PFW1 1433 aa17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 SPRYD3Q8NCJ5 442 aa17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 UPF2Q9HAU5 1272 aaKnown RBP17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 SMC4Q9NTJ3 1288 aa17.08■□□□□ 0.32
DNMT3B-206ENST00000456297 C1orf167Q5SNV9 1468 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 DCCP43146 1447 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 U2SURPO15042 1029 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 NSD2O96028 1365 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 ATAD2Q6PL18 1390 aa17.07■□□□□ 0.32
DNMT3B-206ENST00000456297 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
DNMT3B-206ENST00000456297 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
DNMT3B-206ENST00000456297 FOXO3O43524 673 aa17.05■□□□□ 0.32
DNMT3B-206ENST00000456297 PUS7Q96PZ0 661 aaKnown RBP17.05■□□□□ 0.32
DNMT3B-206ENST00000456297 COL3A1P02461 1466 aaPredicted RBP17.05■□□□□ 0.32
DNMT3B-206ENST00000456297 NGDNQ8NEJ9 315 aaKnown RBP17.04■□□□□ 0.32
DNMT3B-206ENST00000456297 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
DNMT3B-206ENST00000456297 ITPRIPQ8IWB1 547 aa17.04■□□□□ 0.32
DNMT3B-206ENST00000456297 ACEP12821 1306 aa17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 NOB1Q9ULX3 412 aaKnown RBP17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 ANKARQ7Z5J8 1434 aa17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 MFAP1P55081 439 aaKnown RBP17.03■□□□□ 0.32
DNMT3B-206ENST00000456297 TOM1O60784 492 aa17.02■□□□□ 0.32
DNMT3B-206ENST00000456297 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
DNMT3B-206ENST00000456297 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
DNMT3B-206ENST00000456297 FYB1O15117 783 aa17.02■□□□□ 0.31
DNMT3B-206ENST00000456297 TMEM57Q8N5G2 664 aa17.02■□□□□ 0.31
DNMT3B-206ENST00000456297 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.31
DNMT3B-206ENST00000456297 CT47B1P0C2W7 299 aaPredicted RBP17.01■□□□□ 0.31
DNMT3B-206ENST00000456297 TOPAZ1Q8N9V7 1692 aa17.01■□□□□ 0.31
DNMT3B-206ENST00000456297 PLEKHG3A1L390 1219 aa17.01■□□□□ 0.31
DNMT3B-206ENST00000456297 CD163L1Q9NR16 1453 aa17■□□□□ 0.31
DNMT3B-206ENST00000456297 SMC5Q8IY18 1101 aa16.99■□□□□ 0.31
DNMT3B-206ENST00000456297 DDX19BQ9UMR2 479 aa16.99■□□□□ 0.31
DNMT3B-206ENST00000456297 RIPK4P57078 832 aa16.99■□□□□ 0.31
DNMT3B-206ENST00000456297 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
DNMT3B-206ENST00000456297 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 PSME1Q06323 249 aa16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 ITSN1Q15811 1721 aa16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
DNMT3B-206ENST00000456297 FBLN1P23142 703 aa16.97■□□□□ 0.31
DNMT3B-206ENST00000456297 ARXQ96QS3 562 aa16.97■□□□□ 0.31
DNMT3B-206ENST00000456297 FAM43AQ8N2R8 423 aa16.97■□□□□ 0.31
DNMT3B-206ENST00000456297 MCM4P33991 863 aa16.96■□□□□ 0.31
DNMT3B-206ENST00000456297 ROBO1Q9Y6N7 1651 aa16.96■□□□□ 0.31
DNMT3B-206ENST00000456297 CPSF1Q10570 1443 aaKnown RBP16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 IL16Q14005 1332 aa16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 NUTM2GQ5VZR2 741 aa16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 LMOD2Q6P5Q4 547 aa16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 KRT28Q7Z3Y7 464 aa16.95■□□□□ 0.3
DNMT3B-206ENST00000456297 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
DNMT3B-206ENST00000456297 LNPKQ9C0E8 428 aa16.94■□□□□ 0.3
DNMT3B-206ENST00000456297 PNPLA6Q8IY17 1366 aa16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 DIAPH1O60610 1272 aaKnown RBP16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 RRAGDQ9NQL2 400 aaPredicted RBP16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 ZRANB1Q9UGI0 708 aa16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 USP6P35125 1406 aa16.93■□□□□ 0.3
DNMT3B-206ENST00000456297 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
DNMT3B-206ENST00000456297 NUCB1Q02818 461 aa16.92■□□□□ 0.3
DNMT3B-206ENST00000456297 NPHP3Q7Z494 1330 aa16.92■□□□□ 0.3
DNMT3B-206ENST00000456297 NME9Q86XW9 330 aa16.92■□□□□ 0.3
DNMT3B-206ENST00000456297 FSD2A1L4K1 749 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 PANK2Q9BZ23 570 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 CHMP5Q9NZZ3 219 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 KIF16BQ96L93 1317 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 PRKCSHP14314 528 aaPredicted RBP16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 KIF1AQ12756 1690 aa16.91■□□□□ 0.3
DNMT3B-206ENST00000456297 TTC21BQ7Z4L5 1316 aa16.9■□□□□ 0.3
DNMT3B-206ENST00000456297 PRKAR2BP31323 418 aa16.89■□□□□ 0.29
DNMT3B-206ENST00000456297 DDIT3P35638 169 aa16.89■□□□□ 0.29
DNMT3B-206ENST00000456297 L1TD1Q5T7N2 865 aaKnown RBP16.89■□□□□ 0.29
DNMT3B-206ENST00000456297 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
DNMT3B-206ENST00000456297 C1orf115Q9H7X2 142 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms