RNA–Protein interactions for RNA: ENST00000456210.5

SEMA3B-208, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 2,065 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-208ENST00000456210 BRPF1P55201 1214 aaPredicted RBP23.52■■□□□ 1.36
SEMA3B-208ENST00000456210 ZSCAN30Q86W11 494 aa23.52■■□□□ 1.36
SEMA3B-208ENST00000456210 PTPRMP28827 1452 aa23.52■■□□□ 1.36
SEMA3B-208ENST00000456210 GOLGA6L22H0YM25 854 aa23.52■■□□□ 1.35
SEMA3B-208ENST00000456210 VGFO15240 615 aaPredicted RBP23.52■■□□□ 1.35
SEMA3B-208ENST00000456210 NASPP49321 788 aaPredicted RBP23.52■■□□□ 1.35
SEMA3B-208ENST00000456210 IDI1Q13907 227 aa23.52■■□□□ 1.35
SEMA3B-208ENST00000456210 GCC1Q96CN9 775 aa23.52■■□□□ 1.35
SEMA3B-208ENST00000456210 EVC2Q86UK5 1308 aa23.51■■□□□ 1.35
SEMA3B-208ENST00000456210 PDCL3Q9H2J4 239 aa23.5■■□□□ 1.35
SEMA3B-208ENST00000456210 PPIP5K1Q6PFW1 1433 aa23.5■■□□□ 1.35
SEMA3B-208ENST00000456210 TERF1P54274 439 aa23.5■■□□□ 1.35
SEMA3B-208ENST00000456210 PIK3R4Q99570 1358 aa23.49■■□□□ 1.35
SEMA3B-208ENST00000456210 ZNF428Q96B54 188 aa23.48■■□□□ 1.35
SEMA3B-208ENST00000456210 CDC42BPGQ6DT37 1551 aa23.48■■□□□ 1.35
SEMA3B-208ENST00000456210 OFD1O75665 1012 aa23.48■■□□□ 1.35
SEMA3B-208ENST00000456210 SSFA2P28290 1259 aa23.48■■□□□ 1.35
SEMA3B-208ENST00000456210 TBC1D9Q6ZT07 1266 aa23.48■■□□□ 1.35
SEMA3B-208ENST00000456210 KIAA1211Q6ZU35 1233 aa23.47■■□□□ 1.35
SEMA3B-208ENST00000456210 CHMP4BQ9H444 224 aaKnown RBP23.47■■□□□ 1.35
SEMA3B-208ENST00000456210 ZNF445P59923 1031 aa23.47■■□□□ 1.35
SEMA3B-208ENST00000456210 ANP32BQ92688 251 aaKnown RBP23.47■■□□□ 1.35
SEMA3B-208ENST00000456210 HS1BP3Q53T59 392 aa23.46■■□□□ 1.35
SEMA3B-208ENST00000456210 GAS2L2Q8NHY3 880 aa23.46■■□□□ 1.35
SEMA3B-208ENST00000456210 TMEM131LA2VDJ0 1609 aa23.46■■□□□ 1.35
SEMA3B-208ENST00000456210 ZFYVE9O95405 1425 aa23.46■■□□□ 1.35
SEMA3B-208ENST00000456210 PTCH1Q13635 1447 aa23.46■■□□□ 1.35
SEMA3B-208ENST00000456210 BAG4O95429 457 aaKnown RBP23.45■■□□□ 1.35
SEMA3B-208ENST00000456210 U2SURPO15042 1029 aaKnown RBP23.45■■□□□ 1.34
SEMA3B-208ENST00000456210 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.45■■□□□ 1.34
SEMA3B-208ENST00000456210 MYO5BQ9ULV0 1848 aa23.45■■□□□ 1.34
SEMA3B-208ENST00000456210 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
SEMA3B-208ENST00000456210 RIPK4P57078 832 aa23.44■■□□□ 1.34
SEMA3B-208ENST00000456210 TMEM132EQ6IEE7 984 aa23.44■■□□□ 1.34
SEMA3B-208ENST00000456210 A0A1W2PP64 1363 aa23.43■■□□□ 1.34
SEMA3B-208ENST00000456210 ZBTB7BO15156 539 aaPredicted RBP23.43■■□□□ 1.34
SEMA3B-208ENST00000456210 ANKRD45Q5TZF3 282 aa23.43■■□□□ 1.34
SEMA3B-208ENST00000456210 DDX49Q9Y6V7 483 aaKnown RBP23.43■■□□□ 1.34
SEMA3B-208ENST00000456210 TNRQ92752 1358 aa23.42■■□□□ 1.34
SEMA3B-208ENST00000456210 FOXD4L1Q9NU39 408 aa23.42■■□□□ 1.34
SEMA3B-208ENST00000456210 AK9Q5TCS8 1911 aa23.42■■□□□ 1.34
SEMA3B-208ENST00000456210 ARHGAP45Q92619 1136 aa23.42■■□□□ 1.34
SEMA3B-208ENST00000456210 PNPLA6Q8IY17 1366 aa23.41■■□□□ 1.34
SEMA3B-208ENST00000456210 MSNP26038 577 aaKnown RBP23.41■■□□□ 1.34
SEMA3B-208ENST00000456210 NUTM2DQ5VT03 806 aaPredicted RBP23.41■■□□□ 1.34
SEMA3B-208ENST00000456210 RBM42Q9BTD8 480 aaKnown RBP23.41■■□□□ 1.34
SEMA3B-208ENST00000456210 LRRC7Q96NW7 1537 aa23.41■■□□□ 1.34
SEMA3B-208ENST00000456210 CDC45O75419 566 aa23.4■■□□□ 1.34
SEMA3B-208ENST00000456210 CYP2E1P05181 493 aaPredicted RBP23.39■■□□□ 1.34
SEMA3B-208ENST00000456210 CFAP44Q96MT7 982 aa23.39■■□□□ 1.34
SEMA3B-208ENST00000456210 NUCB2P80303 420 aa23.39■■□□□ 1.33
SEMA3B-208ENST00000456210 RABEP1Q15276 862 aa23.39■■□□□ 1.33
SEMA3B-208ENST00000456210 KIF20BQ96Q89 1820 aa23.37■■□□□ 1.33
SEMA3B-208ENST00000456210 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
SEMA3B-208ENST00000456210 PDLIM2Q96JY6 352 aa23.37■■□□□ 1.33
SEMA3B-208ENST00000456210 FAM135BQ49AJ0 1406 aa23.36■■□□□ 1.33
SEMA3B-208ENST00000456210 ZNF500O60304 480 aaPredicted RBP23.36■■□□□ 1.33
SEMA3B-208ENST00000456210 CABP2Q9NPB3 220 aa23.36■■□□□ 1.33
SEMA3B-208ENST00000456210 ABCC4O15439 1325 aa23.36■■□□□ 1.33
SEMA3B-208ENST00000456210 SIRT2Q8IXJ6 389 aa23.35■■□□□ 1.33
SEMA3B-208ENST00000456210 MRPL50Q8N5N7 158 aaKnown RBP23.35■■□□□ 1.33
SEMA3B-208ENST00000456210 NOL7Q9UMY1 257 aaKnown RBP23.35■■□□□ 1.33
SEMA3B-208ENST00000456210 SETD1BQ9UPS6 1966 aaKnown RBP23.34■■□□□ 1.33
SEMA3B-208ENST00000456210 DIAPH1O60610 1272 aaKnown RBP23.34■■□□□ 1.33
SEMA3B-208ENST00000456210 ZSCAN23Q3MJ62 389 aa23.34■■□□□ 1.33
SEMA3B-208ENST00000456210 LMBRD1Q9NUN5 540 aa23.34■■□□□ 1.33
SEMA3B-208ENST00000456210 STAG3Q9UJ98 1225 aa23.34■■□□□ 1.33
SEMA3B-208ENST00000456210 CD163L1Q9NR16 1453 aa23.34■■□□□ 1.33
SEMA3B-208ENST00000456210 GGNBP2Q9H3C7 697 aa23.34■■□□□ 1.33
SEMA3B-208ENST00000456210 CALD1Q05682 793 aaKnown RBP23.33■■□□□ 1.33
SEMA3B-208ENST00000456210 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.33
SEMA3B-208ENST00000456210 FCHSD2O94868 740 aa23.32■■□□□ 1.32
SEMA3B-208ENST00000456210 MAP7D2Q96T17 732 aa23.32■■□□□ 1.32
SEMA3B-208ENST00000456210 GSPT1P15170 499 aaKnown RBP23.32■■□□□ 1.32
SEMA3B-208ENST00000456210 ATAD2Q6PL18 1390 aa23.32■■□□□ 1.32
SEMA3B-208ENST00000456210 FYB1O15117 783 aa23.31■■□□□ 1.32
SEMA3B-208ENST00000456210 VAMP4O75379 141 aa23.31■■□□□ 1.32
SEMA3B-208ENST00000456210 MCTP1Q6DN14 999 aa23.31■■□□□ 1.32
SEMA3B-208ENST00000456210 CWC22Q9HCG8 908 aaKnown RBP23.31■■□□□ 1.32
SEMA3B-208ENST00000456210 C1orf115Q9H7X2 142 aa23.31■■□□□ 1.32
SEMA3B-208ENST00000456210 KIF24Q5T7B8 1368 aa23.3■■□□□ 1.32
SEMA3B-208ENST00000456210 CAVIN1Q6NZI2 390 aaKnown RBP23.3■■□□□ 1.32
SEMA3B-208ENST00000456210 RBSNQ9H1K0 784 aa23.29■■□□□ 1.32
SEMA3B-208ENST00000456210 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.29■■□□□ 1.32
SEMA3B-208ENST00000456210 PLEKHM2Q8IWE5 1019 aa23.28■■□□□ 1.32
SEMA3B-208ENST00000456210 MCM5P33992 734 aa23.28■■□□□ 1.32
SEMA3B-208ENST00000456210 TERF2IPQ9NYB0 399 aa23.28■■□□□ 1.32
SEMA3B-208ENST00000456210 UBR1Q8IWV7 1749 aa23.27■■□□□ 1.32
SEMA3B-208ENST00000456210 USP26Q9BXU7 913 aa23.27■■□□□ 1.32
SEMA3B-208ENST00000456210 A2ML1A8K2U0 1454 aa23.27■■□□□ 1.32
SEMA3B-208ENST00000456210 TTC22Q5TAA0 569 aa23.26■■□□□ 1.31
SEMA3B-208ENST00000456210 CEP170BQ9Y4F5 1589 aaPredicted RBP23.25■■□□□ 1.31
SEMA3B-208ENST00000456210 ZKSCAN5Q9Y2L8 839 aa23.25■■□□□ 1.31
SEMA3B-208ENST00000456210 PRIM1P49642 420 aaKnown RBP23.24■■□□□ 1.31
SEMA3B-208ENST00000456210 HSPA2P54652 639 aa23.24■■□□□ 1.31
SEMA3B-208ENST00000456210 IFT57Q9NWB7 429 aa23.24■■□□□ 1.31
SEMA3B-208ENST00000456210 ALKQ9UM73 1620 aa23.24■■□□□ 1.31
SEMA3B-208ENST00000456210 CSPP1Q1MSJ5 1256 aa23.23■■□□□ 1.31
SEMA3B-208ENST00000456210 INTS3Q68E01 1043 aaKnown RBP23.23■■□□□ 1.31
SEMA3B-208ENST00000456210 DCTPP1Q9H773 170 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms