RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 PNNQ9H307 717 aaKnown RBP12.11□□□□□ -0.47
VSIG4-204ENST00000455586 USP31Q70CQ4 1352 aa12.1□□□□□ -0.47
VSIG4-204ENST00000455586 TMPOP42166 694 aaKnown RBP12.1□□□□□ -0.47
VSIG4-204ENST00000455586 LRRC7Q96NW7 1537 aa12.1□□□□□ -0.47
VSIG4-204ENST00000455586 C1orf167Q5SNV9 1468 aa12.1□□□□□ -0.47
VSIG4-204ENST00000455586 PEAK1Q9H792 1746 aa12.09□□□□□ -0.47
VSIG4-204ENST00000455586 AMPHP49418 695 aa12.09□□□□□ -0.47
VSIG4-204ENST00000455586 RIPK4P57078 832 aa12.09□□□□□ -0.47
VSIG4-204ENST00000455586 LTV1Q96GA3 475 aaPredicted RBP12.09□□□□□ -0.47
VSIG4-204ENST00000455586 TRIM35Q9UPQ4 493 aa12.09□□□□□ -0.47
VSIG4-204ENST00000455586 SULT6B1Q6IMI4 303 aa12.08□□□□□ -0.48
VSIG4-204ENST00000455586 KRT28Q7Z3Y7 464 aa12.08□□□□□ -0.48
VSIG4-204ENST00000455586 FCHSD2O94868 740 aa12.08□□□□□ -0.48
VSIG4-204ENST00000455586 THUMPD2Q9BTF0 503 aaKnown RBP12.08□□□□□ -0.48
VSIG4-204ENST00000455586 MYH16Q9H6N6 1097 aa12.07□□□□□ -0.48
VSIG4-204ENST00000455586 TSR2Q969E8 191 aaKnown RBP12.06□□□□□ -0.48
VSIG4-204ENST00000455586 CRBNQ96SW2 442 aa12.06□□□□□ -0.48
VSIG4-204ENST00000455586 MST1RQ04912 1400 aa12.06□□□□□ -0.48
VSIG4-204ENST00000455586 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
VSIG4-204ENST00000455586 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
VSIG4-204ENST00000455586 BCAR3O75815 825 aa12.05□□□□□ -0.48
VSIG4-204ENST00000455586 NEFMP07197 916 aa12.05□□□□□ -0.48
VSIG4-204ENST00000455586 HOXC9P31274 260 aa12.05□□□□□ -0.48
VSIG4-204ENST00000455586 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
VSIG4-204ENST00000455586 C20orf194Q5TEA3 1177 aa12.05□□□□□ -0.48
VSIG4-204ENST00000455586 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
VSIG4-204ENST00000455586 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
VSIG4-204ENST00000455586 USHBP1Q8N6Y0 703 aa12.04□□□□□ -0.48
VSIG4-204ENST00000455586 CABLES1Q8TDN4 633 aa12.04□□□□□ -0.48
VSIG4-204ENST00000455586 MSH6P52701 1360 aa12.04□□□□□ -0.48
VSIG4-204ENST00000455586 IL16Q14005 1332 aa12.04□□□□□ -0.48
VSIG4-204ENST00000455586 EYA1Q99502 592 aa12.03□□□□□ -0.48
VSIG4-204ENST00000455586 LAS1LQ9Y4W2 734 aaKnown RBP12.03□□□□□ -0.48
VSIG4-204ENST00000455586 SBNO1A3KN83 1393 aa12.03□□□□□ -0.48
VSIG4-204ENST00000455586 FLT4P35916 1363 aa12.03□□□□□ -0.48
VSIG4-204ENST00000455586 GCP02774 474 aa12.02□□□□□ -0.48
VSIG4-204ENST00000455586 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.48
VSIG4-204ENST00000455586 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.49
VSIG4-204ENST00000455586 CT47B1P0C2W7 299 aaPredicted RBP12.02□□□□□ -0.49
VSIG4-204ENST00000455586 ZC3H6P61129 1189 aaKnown RBP12.02□□□□□ -0.49
VSIG4-204ENST00000455586 NFE2L2Q16236 605 aa12.02□□□□□ -0.49
VSIG4-204ENST00000455586 PDE3AQ14432 1141 aa12.01□□□□□ -0.49
VSIG4-204ENST00000455586 BRINP3Q76B58 766 aa12.01□□□□□ -0.49
VSIG4-204ENST00000455586 FANCIQ9NVI1 1328 aa12.01□□□□□ -0.49
VSIG4-204ENST00000455586 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
VSIG4-204ENST00000455586 CANXP27824 592 aaKnown RBP12□□□□□ -0.49
VSIG4-204ENST00000455586 LRRC59Q96AG4 307 aaKnown RBP12□□□□□ -0.49
VSIG4-204ENST00000455586 SLAIN2Q9P270 581 aa12□□□□□ -0.49
VSIG4-204ENST00000455586 USP54Q70EL1 1684 aa12□□□□□ -0.49
VSIG4-204ENST00000455586 EXOSC9Q06265 439 aaKnown RBP11.99□□□□□ -0.49
VSIG4-204ENST00000455586 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
VSIG4-204ENST00000455586 MCM10Q7L590 875 aa11.99□□□□□ -0.49
VSIG4-204ENST00000455586 RGPD1P0DJD0 1748 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 DCCP43146 1447 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 NCOA3Q9Y6Q9 1424 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 NFAT5O94916 1531 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 CALD1Q05682 793 aaKnown RBP11.98□□□□□ -0.49
VSIG4-204ENST00000455586 MTHFSDQ2M296 383 aaKnown RBP11.98□□□□□ -0.49
VSIG4-204ENST00000455586 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 KCNH5Q8NCM2 988 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 IP6K1Q92551 441 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 TNNQ9UQP3 1299 aa11.98□□□□□ -0.49
VSIG4-204ENST00000455586 TRPM3Q9HCF6 1732 aaPredicted RBP11.97□□□□□ -0.49
VSIG4-204ENST00000455586 ARHGEF25Q86VW2 580 aa11.97□□□□□ -0.49
VSIG4-204ENST00000455586 FRAT1Q92837 279 aaPredicted RBP11.97□□□□□ -0.49
VSIG4-204ENST00000455586 IGSF1Q8N6C5 1336 aa11.97□□□□□ -0.49
VSIG4-204ENST00000455586 ELL2O00472 640 aaPredicted RBP11.96□□□□□ -0.49
VSIG4-204ENST00000455586 LMOD3Q0VAK6 560 aa11.96□□□□□ -0.49
VSIG4-204ENST00000455586 CENPQQ7L2Z9 268 aaPredicted RBP11.96□□□□□ -0.49
VSIG4-204ENST00000455586 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.49
VSIG4-204ENST00000455586 KDM2BQ8NHM5 1336 aa11.96□□□□□ -0.49
VSIG4-204ENST00000455586 LTN1O94822 1766 aa11.96□□□□□ -0.49
VSIG4-204ENST00000455586 CHRNA2Q15822 529 aa11.96□□□□□ -0.5
VSIG4-204ENST00000455586 DLG5Q8TDM6 1919 aa11.96□□□□□ -0.5
VSIG4-204ENST00000455586 ARHGEF10O15013 1369 aa11.95□□□□□ -0.5
VSIG4-204ENST00000455586 USP19O94966 1318 aa11.95□□□□□ -0.5
VSIG4-204ENST00000455586 MIS18AQ9NYP9 233 aa11.95□□□□□ -0.5
VSIG4-204ENST00000455586 KIF1AQ12756 1690 aa11.95□□□□□ -0.5
VSIG4-204ENST00000455586 TCERG1O14776 1098 aaKnown RBP11.95□□□□□ -0.5
VSIG4-204ENST00000455586 MED1Q15648 1581 aaPredicted RBP11.94□□□□□ -0.5
VSIG4-204ENST00000455586 KIF24Q5T7B8 1368 aa11.94□□□□□ -0.5
VSIG4-204ENST00000455586 AAMPQ13685 434 aa11.94□□□□□ -0.5
VSIG4-204ENST00000455586 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
VSIG4-204ENST00000455586 SPATA31A3Q5VYP0 1347 aa11.94□□□□□ -0.5
VSIG4-204ENST00000455586 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
VSIG4-204ENST00000455586 MBIPQ9NS73 344 aa11.94□□□□□ -0.5
VSIG4-204ENST00000455586 PXDNQ92626 1479 aa11.93□□□□□ -0.5
VSIG4-204ENST00000455586 KDRP35968 1356 aa11.93□□□□□ -0.5
VSIG4-204ENST00000455586 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
VSIG4-204ENST00000455586 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
VSIG4-204ENST00000455586 SLIT3O75094 1523 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 MS4A1P11836 297 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 CLUAP1Q96AJ1 413 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 ZNF428Q96B54 188 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 SMC4Q9NTJ3 1288 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 ALS2Q96Q42 1657 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 GNAI1P63096 354 aa11.92□□□□□ -0.5
VSIG4-204ENST00000455586 SSH1Q8WYL5 1049 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms