RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 RICTORQ6R327 1708 aa7.38□□□□□ -1.23
HMGB1P4-201ENST00000455362 KDM5CP41229 1560 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 INO80Q9ULG1 1556 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 ATP7AQ04656 1500 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 ZFYVE16Q7Z3T8 1539 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 DUOX2Q9NRD8 1548 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 MLH3Q9UHC1 1453 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 CARNS1A5YM72 827 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 RIMBP2O15034 1052 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 PADI6Q6TGC4 694 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 ADGRG1Q9Y653 693 aa7.37□□□□□ -1.23
HMGB1P4-201ENST00000455362 LHX6Q9UPM6 363 aa7.36□□□□□ -1.23
HMGB1P4-201ENST00000455362 NUP155O75694 1391 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 DHX29Q7Z478 1369 aaKnown RBP7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 UNCXA6NJT0 531 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 SOCS7O14512 581 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 FAM161AQ3B820 660 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 CFAP70Q5T0N1 1121 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 C6orf132Q5T0Z8 1188 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 POTEEQ6S8J3 1075 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 PZPP20742 1482 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 ERBINQ96RT1 1412 aa7.35□□□□□ -1.23
HMGB1P4-201ENST00000455362 FRMPD1Q5SYB0 1578 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 HECW2Q9P2P5 1572 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 EMP3P54852 163 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 FBXO31Q5XUX0 539 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 RIC3Q7Z5B4 369 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 NUTM1Q86Y26 1132 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 FAM177A1Q8N128 213 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 NLRP7Q8WX94 980 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 ZDHHC16Q969W1 377 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 HS3ST6Q96QI5 342 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 LIMD1Q9UGP4 676 aa7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 COL17A1Q9UMD9 1497 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P4-201ENST00000455362 A2MP01023 1474 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 RBM47A0AV96 593 aaKnown RBP7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 FAM205CA6NFA0 338 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 KIF3BO15066 747 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 AP1G2O75843 785 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 B4GALNT3Q6L9W6 998 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 SULF1Q8IWU6 871 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 SIN3AQ96ST3 1273 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 PPP1R12CQ9BZL4 782 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 UNC13BO14795 1591 aa7.33□□□□□ -1.24
HMGB1P4-201ENST00000455362 ZMYM4Q5VZL5 1548 aa7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 KDM5DQ9BY66 1539 aa7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 MAGI2Q86UL8 1455 aa7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 FOSBP53539 338 aa7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 SRPK2P78362 688 aaKnown RBP7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 WASHC4Q2M389 1173 aa7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 TUSC1Q2TAM9 212 aa7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 ZNF454Q8N9F8 522 aa7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 ANKRD30BQ9BXX2 1392 aa7.32□□□□□ -1.24
HMGB1P4-201ENST00000455362 ABCA6Q8N139 1617 aa7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 EIF2AK4Q9P2K8 1649 aaKnown RBP7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 LMOD1P29536 600 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 PRSS12P56730 875 aa7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 NEUROD1Q13562 356 aa7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 TTC13Q8NBP0 860 aa7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 YEATS2Q9ULM3 1422 aa7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 DIP2CQ9Y2E4 1556 aa7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 NDUFB9Q9Y6M9 179 aa7.31□□□□□ -1.24
HMGB1P4-201ENST00000455362 DEPDC5O75140 1603 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 IQGAP3Q86VI3 1631 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 ATP10AO60312 1499 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 CSPP1Q1MSJ5 1256 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 VARS2Q5ST30 1063 aaKnown RBP7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 ADAMTS19Q8TE59 1207 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 KRTAP3-3Q9BYR6 98 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 FAM135AQ9P2D6 1515 aa7.3□□□□□ -1.24
HMGB1P4-201ENST00000455362 ERBB3P21860 1342 aa7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 PALM3A6NDB9 673 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 SPTLC1O15269 473 aa7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 ZNF687Q8N1G0 1237 aa7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 MRRFQ96E11 262 aaKnown RBP7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 CDCA7LQ96GN5 454 aa7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 IGSF5Q9NSI5 407 aa7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 GNEQ9Y223 722 aaKnown RBP7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 KANK1Q14678 1352 aa7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 BCORL1Q5H9F3 1711 aa7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 VWDEQ8N2E2 1590 aa7.29□□□□□ -1.24
HMGB1P4-201ENST00000455362 MROH1Q8NDA8 1641 aa7.28□□□□□ -1.24
HMGB1P4-201ENST00000455362 RNF17Q9BXT8 1623 aaKnown RBP7.28□□□□□ -1.24
HMGB1P4-201ENST00000455362 TMEM88BA6NKF7 163 aa7.28□□□□□ -1.24
HMGB1P4-201ENST00000455362 GJA5P36382 358 aa7.28□□□□□ -1.24
HMGB1P4-201ENST00000455362 GGT6Q6P531 493 aa7.28□□□□□ -1.24
HMGB1P4-201ENST00000455362 RCCD1A6NED2 376 aa7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 NUTM2BA6NNL0 878 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 NUTM2EB1AL46 878 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 ATG7O95352 703 aa7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 USP17L8P0C7I0 530 aa7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 CD46P15529 392 aa7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 ERCC3P19447 782 aa7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 CDCA8Q53HL2 280 aa7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 NUTM2DQ5VT03 806 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 RSBN1LQ6PCB5 846 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P4-201ENST00000455362 NUTM2AQ8IVF1 878 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms