RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 C14orf37Q86TY3 774 aa8.93□□□□□ -0.98
ECHDC1-210ENST00000454859 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
ECHDC1-210ENST00000454859 PPP4R2Q9NY27 417 aa8.93□□□□□ -0.98
ECHDC1-210ENST00000454859 USP19O94966 1318 aa8.92□□□□□ -0.98
ECHDC1-210ENST00000454859 NPHP3Q7Z494 1330 aa8.92□□□□□ -0.98
ECHDC1-210ENST00000454859 TMPOP42166 694 aaKnown RBP8.92□□□□□ -0.98
ECHDC1-210ENST00000454859 HAP1P54257 671 aaPredicted RBP8.92□□□□□ -0.98
ECHDC1-210ENST00000454859 FKBP8Q14318 412 aa8.92□□□□□ -0.98
ECHDC1-210ENST00000454859 HTATSF1O43719 755 aaKnown RBP8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 ESCO1Q5FWF5 840 aa8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 PMFBP1Q8TBY8 1022 aa8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 DLG5Q8TDM6 1919 aa8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 CAMTA1Q9Y6Y1 1673 aa8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 U2SURPO15042 1029 aaKnown RBP8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 NLRP6P59044 892 aa8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 NFE2L2Q16236 605 aa8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 ABTB2Q8N961 1025 aa8.91□□□□□ -0.98
ECHDC1-210ENST00000454859 NCAPD2Q15021 1401 aa8.9□□□□□ -0.98
ECHDC1-210ENST00000454859 MS4A1P11836 297 aa8.9□□□□□ -0.98
ECHDC1-210ENST00000454859 RRP1P56182 461 aaKnown RBP8.9□□□□□ -0.98
ECHDC1-210ENST00000454859 MAP3K19Q56UN5 1328 aa8.9□□□□□ -0.99
ECHDC1-210ENST00000454859 CCDC146Q8IYE0 955 aa8.89□□□□□ -0.99
ECHDC1-210ENST00000454859 EMILIN1Q9Y6C2 1016 aa8.89□□□□□ -0.99
ECHDC1-210ENST00000454859 IGSF1Q8N6C5 1336 aa8.89□□□□□ -0.99
ECHDC1-210ENST00000454859 IP6K1Q92551 441 aa8.89□□□□□ -0.99
ECHDC1-210ENST00000454859 BABAM1Q9NWV8 329 aa8.89□□□□□ -0.99
ECHDC1-210ENST00000454859 CRYBG1Q9Y4K1 1723 aa8.89□□□□□ -0.99
ECHDC1-210ENST00000454859 SOS1Q07889 1333 aaPredicted RBP8.89□□□□□ -0.99
ECHDC1-210ENST00000454859 NHSL1Q5SYE7 1610 aa8.89□□□□□ -0.99
ECHDC1-210ENST00000454859 AMPHP49418 695 aa8.88□□□□□ -0.99
ECHDC1-210ENST00000454859 EIF4A2Q14240 407 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-210ENST00000454859 PXDNQ92626 1479 aa8.88□□□□□ -0.99
ECHDC1-210ENST00000454859 BRPF1P55201 1214 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-210ENST00000454859 TNS3Q68CZ2 1445 aa8.88□□□□□ -0.99
ECHDC1-210ENST00000454859 PRKAR2BP31323 418 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 PDE3AQ14432 1141 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 KRT28Q7Z3Y7 464 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 CDCA7LQ96GN5 454 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 IFT57Q9NWB7 429 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 CACNA1FO60840 1977 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 HOXC9P31274 260 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 RIPK4P57078 832 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 GNAI1P63096 354 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 GAS2L2Q8NHY3 880 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 CHMP4AQ9BY43 222 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 TRIM35Q9UPQ4 493 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 OVOS2A0A0G2JMS6 1433 aa8.87□□□□□ -0.99
ECHDC1-210ENST00000454859 CPDO75976 1380 aa8.86□□□□□ -0.99
ECHDC1-210ENST00000454859 LMO7Q8WWI1 1683 aa8.86□□□□□ -0.99
ECHDC1-210ENST00000454859 NUTM2FA1L443 756 aa8.86□□□□□ -0.99
ECHDC1-210ENST00000454859 PPM1GO15355 546 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-210ENST00000454859 RRS1Q15050 365 aaKnown RBP8.86□□□□□ -0.99
ECHDC1-210ENST00000454859 LRRC37A3O60309 1634 aa8.86□□□□□ -0.99
ECHDC1-210ENST00000454859 ALDH1L2Q3SY69 923 aa8.85□□□□□ -0.99
ECHDC1-210ENST00000454859 ARHGEF25Q86VW2 580 aa8.85□□□□□ -0.99
ECHDC1-210ENST00000454859 COL18A1P39060 1754 aa8.85□□□□□ -0.99
ECHDC1-210ENST00000454859 PAK3O75914 559 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-210ENST00000454859 HSPA2P54652 639 aa8.85□□□□□ -0.99
ECHDC1-210ENST00000454859 GCP02774 474 aa8.84□□□□□ -0.99
ECHDC1-210ENST00000454859 ZNF853P0CG23 659 aa8.84□□□□□ -0.99
ECHDC1-210ENST00000454859 ORAI2Q96SN7 254 aa8.84□□□□□ -0.99
ECHDC1-210ENST00000454859 SOS2Q07890 1332 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-210ENST00000454859 SPATA31A3Q5VYP0 1347 aa8.84□□□□□ -0.99
ECHDC1-210ENST00000454859 KIAA0232Q92628 1395 aa8.84□□□□□ -0.99
ECHDC1-210ENST00000454859 HSP90AB2PQ58FF8 381 aa8.83□□□□□ -1
ECHDC1-210ENST00000454859 CFAP44Q96MT7 982 aa8.83□□□□□ -1
ECHDC1-210ENST00000454859 CHMP4BQ9H444 224 aaKnown RBP8.83□□□□□ -1
ECHDC1-210ENST00000454859 SALL2Q9Y467 1007 aaPredicted RBP8.83□□□□□ -1
ECHDC1-210ENST00000454859 AHDC1Q5TGY3 1603 aaPredicted RBP8.83□□□□□ -1
ECHDC1-210ENST00000454859 FOXO3O43524 673 aa8.83□□□□□ -1
ECHDC1-210ENST00000454859 AMOTQ4VCS5 1084 aa8.83□□□□□ -1
ECHDC1-210ENST00000454859 SULT6B1Q6IMI4 303 aa8.83□□□□□ -1
ECHDC1-210ENST00000454859 KCNA4P22459 653 aa8.82□□□□□ -1
ECHDC1-210ENST00000454859 SLAIN2Q9P270 581 aa8.82□□□□□ -1
ECHDC1-210ENST00000454859 FANCIQ9NVI1 1328 aa8.82□□□□□ -1
ECHDC1-210ENST00000454859 COL22A1Q8NFW1 1626 aaPredicted RBP8.82□□□□□ -1
ECHDC1-210ENST00000454859 IPO8O15397 1037 aaKnown RBP8.82□□□□□ -1
ECHDC1-210ENST00000454859 ARHGAP45Q92619 1136 aa8.82□□□□□ -1
ECHDC1-210ENST00000454859 EYA1Q99502 592 aa8.82□□□□□ -1
ECHDC1-210ENST00000454859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.82□□□□□ -13e-7■■□□□ 13.1
ECHDC1-210ENST00000454859 KIF16BQ96L93 1317 aa8.82□□□□□ -1
ECHDC1-210ENST00000454859 ADAMTS7Q9UKP4 1686 aa8.82□□□□□ -1
ECHDC1-210ENST00000454859 ABCA3Q99758 1704 aa8.82□□□□□ -1
ECHDC1-210ENST00000454859 RARSP54136 660 aaKnown RBP8.81□□□□□ -1
ECHDC1-210ENST00000454859 LTBP4Q8N2S1 1624 aa8.81□□□□□ -1
ECHDC1-210ENST00000454859 PHACTR3Q96KR7 559 aa8.81□□□□□ -1
ECHDC1-210ENST00000454859 SPINK5Q9NQ38 1064 aaPredicted RBP8.81□□□□□ -1
ECHDC1-210ENST00000454859 HMOX1P09601 288 aa8.8□□□□□ -1
ECHDC1-210ENST00000454859 BRINP3Q76B58 766 aa8.8□□□□□ -1
ECHDC1-210ENST00000454859 ZNF335Q9H4Z2 1342 aaPredicted RBP8.8□□□□□ -1
ECHDC1-210ENST00000454859 CHL1O00533 1208 aa8.8□□□□□ -1
ECHDC1-210ENST00000454859 NEUROD2Q15784 382 aa8.8□□□□□ -1
ECHDC1-210ENST00000454859 RTF1Q92541 710 aaKnown RBP8.8□□□□□ -1
ECHDC1-210ENST00000454859 RRP7AQ9Y3A4 280 aaKnown RBP8.8□□□□□ -1
ECHDC1-210ENST00000454859 MAP3K5Q99683 1374 aa8.79□□□□□ -1
ECHDC1-210ENST00000454859 RGPD5Q99666 1765 aa8.79□□□□□ -1
ECHDC1-210ENST00000454859 CRB1P82279 1406 aa8.79□□□□□ -1
ECHDC1-210ENST00000454859 PKD1L3Q7Z443 1732 aa8.79□□□□□ -1
ECHDC1-210ENST00000454859 PARP4Q9UKK3 1724 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms