RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 TBC1D32Q96NH3 1257 aa15.91■□□□□ 0.14
ECHDC1-209ENST00000454591 CHMP4BQ9H444 224 aaKnown RBP15.91■□□□□ 0.14
ECHDC1-209ENST00000454591 IFT57Q9NWB7 429 aa15.91■□□□□ 0.14
ECHDC1-209ENST00000454591 GNAI1P63096 354 aa15.9■□□□□ 0.14
ECHDC1-209ENST00000454591 LMOD3Q0VAK6 560 aa15.9■□□□□ 0.14
ECHDC1-209ENST00000454591 NUDT16Q96DE0 195 aaKnown RBP15.9■□□□□ 0.14
ECHDC1-209ENST00000454591 NOB1Q9ULX3 412 aaKnown RBP15.9■□□□□ 0.14
ECHDC1-209ENST00000454591 PLEKHG1Q9ULL1 1385 aa15.9■□□□□ 0.14
ECHDC1-209ENST00000454591 RGPD1P0DJD0 1748 aa15.9■□□□□ 0.14
ECHDC1-209ENST00000454591 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.89■□□□□ 0.13
ECHDC1-209ENST00000454591 BECN1Q14457 450 aa15.89■□□□□ 0.13
ECHDC1-209ENST00000454591 KIF24Q5T7B8 1368 aa15.89■□□□□ 0.13
ECHDC1-209ENST00000454591 SEC24BO95487 1268 aa15.89■□□□□ 0.13
ECHDC1-209ENST00000454591 RIMS1Q86UR5 1692 aaKnown RBP15.88■□□□□ 0.13
ECHDC1-209ENST00000454591 TMEM57Q8N5G2 664 aa15.88■□□□□ 0.13
ECHDC1-209ENST00000454591 UPF2Q9HAU5 1272 aaKnown RBP15.88■□□□□ 0.13
ECHDC1-209ENST00000454591 OVOS2A0A0J9YW53 1432 aa15.87■□□□□ 0.13
ECHDC1-209ENST00000454591 OVOS2Q6IE36 1432 aa15.87■□□□□ 0.13
ECHDC1-209ENST00000454591 VAMP4O75379 141 aa15.87■□□□□ 0.13
ECHDC1-209ENST00000454591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.87■□□□□ 0.135e-7■■■□□ 18.9
ECHDC1-209ENST00000454591 COG3Q96JB2 828 aa15.87■□□□□ 0.13
ECHDC1-209ENST00000454591 SLIT1O75093 1534 aa15.86■□□□□ 0.13
ECHDC1-209ENST00000454591 PLEKHG3A1L390 1219 aa15.86■□□□□ 0.13
ECHDC1-209ENST00000454591 ITPRIPQ8IWB1 547 aa15.86■□□□□ 0.13
ECHDC1-209ENST00000454591 MRPL50Q8N5N7 158 aaKnown RBP15.86■□□□□ 0.13
ECHDC1-209ENST00000454591 EMILIN1Q9Y6C2 1016 aa15.86■□□□□ 0.13
ECHDC1-209ENST00000454591 ARHGAP23Q9P227 1491 aa15.86■□□□□ 0.13
ECHDC1-209ENST00000454591 SLC4A3P48751 1232 aa15.85■□□□□ 0.13
ECHDC1-209ENST00000454591 NME9Q86XW9 330 aa15.85■□□□□ 0.13
ECHDC1-209ENST00000454591 PHACTR3Q96KR7 559 aa15.85■□□□□ 0.13
ECHDC1-209ENST00000454591 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
ECHDC1-209ENST00000454591 DIP2AQ14689 1571 aa15.85■□□□□ 0.13
ECHDC1-209ENST00000454591 ABCC4O15439 1325 aa15.85■□□□□ 0.13
ECHDC1-209ENST00000454591 PRR36Q9H6K5 1346 aa15.85■□□□□ 0.13
ECHDC1-209ENST00000454591 USP31Q70CQ4 1352 aa15.85■□□□□ 0.13
ECHDC1-209ENST00000454591 CFAP44Q96MT7 982 aa15.84■□□□□ 0.13
ECHDC1-209ENST00000454591 ROBO2Q9HCK4 1378 aa15.84■□□□□ 0.13
ECHDC1-209ENST00000454591 NUCB1Q02818 461 aa15.84■□□□□ 0.13
ECHDC1-209ENST00000454591 TXNDC2Q86VQ3 553 aa15.84■□□□□ 0.13
ECHDC1-209ENST00000454591 ESF1Q9H501 851 aaKnown RBP15.84■□□□□ 0.13
ECHDC1-209ENST00000454591 USP54Q70EL1 1684 aa15.83■□□□□ 0.13
ECHDC1-209ENST00000454591 USP6P35125 1406 aa15.82■□□□□ 0.12
ECHDC1-209ENST00000454591 PEAK1Q9H792 1746 aa15.81■□□□□ 0.12
ECHDC1-209ENST00000454591 FMN2Q9NZ56 1722 aa15.81■□□□□ 0.12
ECHDC1-209ENST00000454591 ZBTB7BO15156 539 aaPredicted RBP15.81■□□□□ 0.12
ECHDC1-209ENST00000454591 GCC1Q96CN9 775 aa15.81■□□□□ 0.12
ECHDC1-209ENST00000454591 ANTXR1Q9H6X2 564 aa15.81■□□□□ 0.12
ECHDC1-209ENST00000454591 TTC21BQ7Z4L5 1316 aa15.81■□□□□ 0.12
ECHDC1-209ENST00000454591 HAP1P54257 671 aaPredicted RBP15.8■□□□□ 0.12
ECHDC1-209ENST00000454591 MLECQ14165 292 aa15.8■□□□□ 0.12
ECHDC1-209ENST00000454591 GSE1Q14687 1217 aa15.8■□□□□ 0.12
ECHDC1-209ENST00000454591 MBIPQ9NS73 344 aa15.8■□□□□ 0.12
ECHDC1-209ENST00000454591 KIAA0232Q92628 1395 aa15.8■□□□□ 0.12
ECHDC1-209ENST00000454591 HMOX1P09601 288 aa15.79■□□□□ 0.12
ECHDC1-209ENST00000454591 FBLN1P23142 703 aa15.78■□□□□ 0.12
ECHDC1-209ENST00000454591 API5Q9BZZ5 524 aaKnown RBP15.78■□□□□ 0.12
ECHDC1-209ENST00000454591 ZRANB1Q9UGI0 708 aa15.78■□□□□ 0.12
ECHDC1-209ENST00000454591 TTC21AQ8NDW8 1320 aa15.78■□□□□ 0.12
ECHDC1-209ENST00000454591 XRN1Q8IZH2 1706 aaKnown RBP15.78■□□□□ 0.12
ECHDC1-209ENST00000454591 PTPRUQ92729 1446 aa15.78■□□□□ 0.12
ECHDC1-209ENST00000454591 ARHGEF10O15013 1369 aa15.77■□□□□ 0.11
ECHDC1-209ENST00000454591 TWISTNBQ3B726 338 aaPredicted RBP15.77■□□□□ 0.11
ECHDC1-209ENST00000454591 CHD1LQ86WJ1 897 aa15.77■□□□□ 0.11
ECHDC1-209ENST00000454591 TBC1D2Q9BYX2 928 aa15.77■□□□□ 0.11
ECHDC1-209ENST00000454591 RBM25P49756 843 aaKnown RBP15.76■□□□□ 0.11
ECHDC1-209ENST00000454591 BMP2KLQ5H9B9 411 aa15.76■□□□□ 0.11
ECHDC1-209ENST00000454591 TSPYL6Q8N831 410 aa15.76■□□□□ 0.11
ECHDC1-209ENST00000454591 ACEP12821 1306 aa15.75■□□□□ 0.11
ECHDC1-209ENST00000454591 EIF4A2Q14240 407 aaKnown RBP15.75■□□□□ 0.11
ECHDC1-209ENST00000454591 C22orf23Q9BZE7 217 aa15.75■□□□□ 0.11
ECHDC1-209ENST00000454591 NCOA3Q9Y6Q9 1424 aa15.75■□□□□ 0.11
ECHDC1-209ENST00000454591 CHL1O00533 1208 aa15.74■□□□□ 0.11
ECHDC1-209ENST00000454591 FRAT2O75474 233 aaPredicted RBP15.74■□□□□ 0.11
ECHDC1-209ENST00000454591 TBX22Q9Y458 520 aa15.74■□□□□ 0.11
ECHDC1-209ENST00000454591 LRRC37A3O60309 1634 aa15.74■□□□□ 0.11
ECHDC1-209ENST00000454591 NCKAP5LQ9HCH0 1330 aa15.74■□□□□ 0.11
ECHDC1-209ENST00000454591 EIF5BO60841 1220 aaKnown RBP15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 RRS1Q15050 365 aaKnown RBP15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 INTS3Q68E01 1043 aaKnown RBP15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 THUMPD2Q9BTF0 503 aaKnown RBP15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 RGS12O14924 1447 aa15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 ANKARQ7Z5J8 1434 aa15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 KDRP35968 1356 aa15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 LTKP29376 864 aa15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 SNX21Q969T3 373 aa15.73■□□□□ 0.11
ECHDC1-209ENST00000454591 CRB1P82279 1406 aa15.72■□□□□ 0.11
ECHDC1-209ENST00000454591 MARF1Q9Y4F3 1742 aaKnown RBP15.71■□□□□ 0.11
ECHDC1-209ENST00000454591 SBNO1A3KN83 1393 aa15.71■□□□□ 0.1
ECHDC1-209ENST00000454591 PIK3C2AO00443 1686 aa15.71■□□□□ 0.1
ECHDC1-209ENST00000454591 FER1L4A9Z1Z3 1794 aa15.7■□□□□ 0.1
ECHDC1-209ENST00000454591 SIRT2Q8IXJ6 389 aa15.7■□□□□ 0.1
ECHDC1-209ENST00000454591 N4BP2Q86UW6 1770 aaPredicted RBP15.7■□□□□ 0.1
ECHDC1-209ENST00000454591 PTPRCP08575 1304 aa15.7■□□□□ 0.1
ECHDC1-209ENST00000454591 FLT4P35916 1363 aa15.69■□□□□ 0.1
ECHDC1-209ENST00000454591 ATP10DQ9P241 1426 aa15.69■□□□□ 0.1
ECHDC1-209ENST00000454591 CACNA1FO60840 1977 aa15.68■□□□□ 0.1
ECHDC1-209ENST00000454591 EID1Q9Y6B2 187 aa15.68■□□□□ 0.1
ECHDC1-209ENST00000454591 SULT6B1Q6IMI4 303 aa15.68■□□□□ 0.1
ECHDC1-209ENST00000454591 LNPKQ9C0E8 428 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms