RNA–Protein interactions for RNA: ENST00000453246.5

ABCA13-205, Transcript of ATP binding cassette subfamily A member 13, human

TSL 2

Gene ABCA13, Length 4,275 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA13-205	ENST00000453246	LRRIQ1	Q96JM4	1722 aa		11.98	□□□□□ -0.49
ABCA13-205	ENST00000453246	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.98	□□□□□ -0.49
ABCA13-205	ENST00000453246	TSPYL6	Q8N831	410 aa		11.98	□□□□□ -0.49
ABCA13-205	ENST00000453246	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.98	□□□□□ -0.49
ABCA13-205	ENST00000453246	WASL	O00401	505 aa	Predicted RBP	11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	PSME1	Q06323	249 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	IL1RAPL2	Q9NP60	686 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	ABCA8	O94911	1581 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	BMP2KL	Q5H9B9	411 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	HDGFL1	Q5TGJ6	251 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	VPS37C	A5D8V6	355 aa	Predicted RBP	11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	MAP4K4	O95819	1239 aa	Predicted RBP	11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	SSFA2	P28290	1259 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	NUCB1	Q02818	461 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	AIMP1	Q12904	312 aa	Known RBP	11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	PHACTR3	Q96KR7	559 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	SAMD9L	Q8IVG5	1584 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	WDR7	Q9Y4E6	1490 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	INSR	P06213	1382 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	ARHGEF5	Q12774	1597 aa		11.97	□□□□□ -0.49
ABCA13-205	ENST00000453246	IL16	Q14005	1332 aa		11.96	□□□□□ -0.49
ABCA13-205	ENST00000453246	ZNF521	Q96K83	1311 aa		11.96	□□□□□ -0.49
ABCA13-205	ENST00000453246		A0A1W2PP64	1363 aa		11.96	□□□□□ -0.49
ABCA13-205	ENST00000453246	POLK	Q9UBT6	870 aa		11.96	□□□□□ -0.49
ABCA13-205	ENST00000453246	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.96	□□□□□ -0.49
ABCA13-205	ENST00000453246	RBM42	Q9BTD8	480 aa	Known RBP	11.96	□□□□□ -0.49
ABCA13-205	ENST00000453246	LRRCC1	Q9C099	1032 aa		11.96	□□□□□ -0.49
ABCA13-205	ENST00000453246	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.96	□□□□□ -0.5
ABCA13-205	ENST00000453246	ESPN	B1AK53	854 aa		11.96	□□□□□ -0.5
ABCA13-205	ENST00000453246	CCT4	P50991	539 aa	Known RBP	11.96	□□□□□ -0.5
ABCA13-205	ENST00000453246	C8orf58	Q8NAV2	365 aa		11.96	□□□□□ -0.5
ABCA13-205	ENST00000453246	ZKSCAN1	P17029	563 aa	Predicted RBP	11.95	□□□□□ -0.5
ABCA13-205	ENST00000453246	RUFY2	Q8WXA3	655 aa		11.95	□□□□□ -0.5
ABCA13-205	ENST00000453246	SMC3	Q9UQE7	1217 aa		11.95	□□□□□ -0.5
ABCA13-205	ENST00000453246	ZBTB40	Q9NUA8	1239 aa		11.95	□□□□□ -0.5
ABCA13-205	ENST00000453246	ATP6V1D	Q9Y5K8	247 aa		11.95	□□□□□ -0.5
ABCA13-205	ENST00000453246	CSPP1	Q1MSJ5	1256 aa		11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	GORAB	Q5T7V8	394 aa		11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	PANK2	Q9BZ23	570 aa		11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	UPF3B	Q9BZI7	483 aa	Known RBP	11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	PTPRT	O14522	1441 aa		11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	CFAP65	Q6ZU64	1925 aa	Known RBP	11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	SMC5	Q8IY18	1101 aa		11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	MPND	Q8N594	471 aa		11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	KRT24	Q2M2I5	525 aa		11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	TRMT2A	Q8IZ69	625 aa	Known RBP	11.94	□□□□□ -0.5
ABCA13-205	ENST00000453246	KDM5D	Q9BY66	1539 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	TSHZ3	Q63HK5	1081 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	AEBP1	Q8IUX7	1158 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	TRIM35	Q9UPQ4	493 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	NCKAP5L	Q9HCH0	1330 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	ATP10A	O60312	1499 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	ZNF518A	Q6AHZ1	1483 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	VAMP4	O75379	141 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	NEXN	Q0ZGT2	675 aa		11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	CLASRP	Q8N2M8	674 aa	Known RBP	11.93	□□□□□ -0.5
ABCA13-205	ENST00000453246	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.92	□□□□□ -0.5
ABCA13-205	ENST00000453246	HSP90AB2P	Q58FF8	381 aa		11.92	□□□□□ -0.5
ABCA13-205	ENST00000453246	MRPL50	Q8N5N7	158 aa	Known RBP	11.92	□□□□□ -0.5
ABCA13-205	ENST00000453246	CWC22	Q9HCG8	908 aa	Known RBP	11.92	□□□□□ -0.5
ABCA13-205	ENST00000453246	CLSTN1	O94985	981 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	XRCC6	P12956	609 aa	Known RBP eCLIP	11.91	□□□□□ -0.5	4e-7	■■■■■ 37.7
ABCA13-205	ENST00000453246	HSP90AB4P	Q58FF6	505 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	MEIS3	Q99687	375 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	SRGAP3	O43295	1099 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	ZMYND15	Q9H091	742 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	GOLGA6L6	A8MZA4	724 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246		H3BQV1	296 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	IFFO2	Q5TF58	517 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	NUTM1	Q86Y26	1132 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	CNTROB	Q8N137	903 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	SRCIN1	Q9C0H9	1055 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	FIBP	O43427	364 aa		11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	HTATSF1	O43719	755 aa	Known RBP	11.91	□□□□□ -0.5
ABCA13-205	ENST00000453246	MCM2	P49736	904 aa		11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	CCDC173	Q0VFZ6	552 aa		11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	ATP7A	Q04656	1500 aa		11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	MBD3	O95983	291 aa		11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	GNL2	Q13823	731 aa	Known RBP	11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	FAM184A	Q8NB25	1140 aa		11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	TTC37	Q6PGP7	1564 aa		11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	DDX58	O95786	925 aa	Known RBP	11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	TAF7L	Q5H9L4	462 aa		11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	ARHGAP45	Q92619	1136 aa		11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	PUS7	Q96PZ0	661 aa	Known RBP	11.9	□□□□□ -0.5
ABCA13-205	ENST00000453246	UGGT1	Q9NYU2	1555 aa		11.9	□□□□□ -0.51
ABCA13-205	ENST00000453246		A0A0U1RQG5	324 aa	Predicted RBP	11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	RRP9	O43818	475 aa	Known RBP	11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	RIC3	Q7Z5B4	369 aa		11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	USHBP1	Q8N6Y0	703 aa		11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	ESCO1	Q5FWF5	840 aa		11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	MX1	P20591	662 aa		11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	FOSB	P53539	338 aa		11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	ERVK-7	P63135	1459 aa		11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	CDC42BPA	Q5VT25	1732 aa		11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	NRDC	O43847	1150 aa		11.89	□□□□□ -0.51
ABCA13-205	ENST00000453246	TTC22	Q5TAA0	569 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms