RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 ARHGAP31Q2M1Z3 1444 aa15.73■□□□□ 0.11
THUMPD3-206ENST00000452837 FAM83GA6ND36 823 aa15.72■□□□□ 0.11
THUMPD3-206ENST00000452837 C8orf58Q8NAV2 365 aa15.72■□□□□ 0.11
THUMPD3-206ENST00000452837 CFAP74Q9C0B2 1584 aa15.72■□□□□ 0.11
THUMPD3-206ENST00000452837 MRE11P49959 708 aa15.72■□□□□ 0.11
THUMPD3-206ENST00000452837 RAB3GAP1Q15042 981 aa15.72■□□□□ 0.11
THUMPD3-206ENST00000452837 GSPT1P15170 499 aaKnown RBP15.71■□□□□ 0.11
THUMPD3-206ENST00000452837 DCTN1Q14203 1278 aa15.71■□□□□ 0.11
THUMPD3-206ENST00000452837 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
THUMPD3-206ENST00000452837 TMEM131LA2VDJ0 1609 aa15.71■□□□□ 0.1
THUMPD3-206ENST00000452837 PIK3R4Q99570 1358 aa15.7■□□□□ 0.1
THUMPD3-206ENST00000452837 ERBB4Q15303 1308 aa15.7■□□□□ 0.1
THUMPD3-206ENST00000452837 GAS2L2Q8NHY3 880 aa15.7■□□□□ 0.1
THUMPD3-206ENST00000452837 UBE2Q2Q8WVN8 375 aa15.7■□□□□ 0.1
THUMPD3-206ENST00000452837 PTCH1Q13635 1447 aa15.7■□□□□ 0.1
THUMPD3-206ENST00000452837 CLTCQ00610 1675 aaKnown RBP15.7■□□□□ 0.1
THUMPD3-206ENST00000452837 GCC1Q96CN9 775 aa15.7■□□□□ 0.1
THUMPD3-206ENST00000452837 ABCC4O15439 1325 aa15.7■□□□□ 0.1
THUMPD3-206ENST00000452837 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
THUMPD3-206ENST00000452837 NME9Q86XW9 330 aa15.69■□□□□ 0.1
THUMPD3-206ENST00000452837 CDC42BPGQ6DT37 1551 aa15.69■□□□□ 0.1
THUMPD3-206ENST00000452837 SSFA2P28290 1259 aa15.69■□□□□ 0.1
THUMPD3-206ENST00000452837 IL13P35225 146 aa15.69■□□□□ 0.1
THUMPD3-206ENST00000452837 NCKAP5LQ9HCH0 1330 aa15.69■□□□□ 0.1
THUMPD3-206ENST00000452837 TWISTNBQ3B726 338 aaPredicted RBP15.69■□□□□ 0.1
THUMPD3-206ENST00000452837 C16orf71Q8IYS4 520 aaPredicted RBP15.69■□□□□ 0.1
THUMPD3-206ENST00000452837 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
THUMPD3-206ENST00000452837 K7ELQ4 463 aaPredicted RBP15.68■□□□□ 0.1
THUMPD3-206ENST00000452837 CLCN1P35523 988 aa15.68■□□□□ 0.1
THUMPD3-206ENST00000452837 ARHGAP45Q92619 1136 aa15.68■□□□□ 0.1
THUMPD3-206ENST00000452837 RRS1Q15050 365 aaKnown RBP15.67■□□□□ 0.1
THUMPD3-206ENST00000452837 IFT57Q9NWB7 429 aa15.67■□□□□ 0.1
THUMPD3-206ENST00000452837 HSP90AA1P07900 732 aaKnown RBP15.67■□□□□ 0.1
THUMPD3-206ENST00000452837 KRT24Q2M2I5 525 aa15.67■□□□□ 0.1
THUMPD3-206ENST00000452837 ZNF428Q96B54 188 aa15.67■□□□□ 0.1
THUMPD3-206ENST00000452837 CIZ1Q9ULV3 898 aaPredicted RBP15.67■□□□□ 0.1
THUMPD3-206ENST00000452837 KIF20BQ96Q89 1820 aa15.67■□□□□ 0.1
THUMPD3-206ENST00000452837 GNAI1P63096 354 aa15.66■□□□□ 0.1
THUMPD3-206ENST00000452837 OTUD7AQ8TE49 926 aaPredicted RBP15.66■□□□□ 0.1
THUMPD3-206ENST00000452837 PLEKHM2Q8IWE5 1019 aa15.66■□□□□ 0.1
THUMPD3-206ENST00000452837 PREX1Q8TCU6 1659 aa15.65■□□□□ 0.1
THUMPD3-206ENST00000452837 GBP4Q96PP9 640 aa15.65■□□□□ 0.1
THUMPD3-206ENST00000452837 KNDC1Q76NI1 1749 aa15.64■□□□□ 0.09
THUMPD3-206ENST00000452837 NAP1L5Q96NT1 182 aaPredicted RBP15.64■□□□□ 0.09
THUMPD3-206ENST00000452837 MAP2P11137 1827 aaKnown RBP15.63■□□□□ 0.09
THUMPD3-206ENST00000452837 CDC45O75419 566 aa15.63■□□□□ 0.09
THUMPD3-206ENST00000452837 CFAP44Q96MT7 982 aa15.63■□□□□ 0.09
THUMPD3-206ENST00000452837 STAG3Q9UJ98 1225 aa15.63■□□□□ 0.09
THUMPD3-206ENST00000452837 NEO1Q92859 1461 aa15.63■□□□□ 0.09
THUMPD3-206ENST00000452837 ESPNB1AK53 854 aa15.61■□□□□ 0.09
THUMPD3-206ENST00000452837 SMARCA5O60264 1052 aaPredicted RBP15.61■□□□□ 0.09
THUMPD3-206ENST00000452837 PKP1Q13835 747 aa15.61■□□□□ 0.09
THUMPD3-206ENST00000452837 AEBP1Q8IUX7 1158 aa15.61■□□□□ 0.09
THUMPD3-206ENST00000452837 APBB1O00213 710 aa15.61■□□□□ 0.09
THUMPD3-206ENST00000452837 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
THUMPD3-206ENST00000452837 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
THUMPD3-206ENST00000452837 BAG4O95429 457 aaKnown RBP15.6■□□□□ 0.09
THUMPD3-206ENST00000452837 CALD1Q05682 793 aaKnown RBP15.6■□□□□ 0.09
THUMPD3-206ENST00000452837 ATP7BP35670 1465 aa15.6■□□□□ 0.09
THUMPD3-206ENST00000452837 TTC22Q5TAA0 569 aa15.6■□□□□ 0.09
THUMPD3-206ENST00000452837 RICTORQ6R327 1708 aa15.6■□□□□ 0.09
THUMPD3-206ENST00000452837 CPSF1Q10570 1443 aaKnown RBP15.59■□□□□ 0.09
THUMPD3-206ENST00000452837 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
THUMPD3-206ENST00000452837 CPS1P31327 1500 aa15.59■□□□□ 0.09
THUMPD3-206ENST00000452837 USP26Q9BXU7 913 aa15.59■□□□□ 0.09
THUMPD3-206ENST00000452837 CHMP4BQ9H444 224 aaKnown RBP15.59■□□□□ 0.09
THUMPD3-206ENST00000452837 CHAMP1Q96JM3 812 aa15.58■□□□□ 0.09
THUMPD3-206ENST00000452837 RGS12O14924 1447 aa15.58■□□□□ 0.08
THUMPD3-206ENST00000452837 ATP10DQ9P241 1426 aa15.58■□□□□ 0.08
THUMPD3-206ENST00000452837 WASLO00401 505 aaPredicted RBP15.58■□□□□ 0.08
THUMPD3-206ENST00000452837 SKOR2Q2VWA4 1001 aaPredicted RBP15.58■□□□□ 0.08
THUMPD3-206ENST00000452837 TXNDC2Q86VQ3 553 aa15.58■□□□□ 0.08
THUMPD3-206ENST00000452837 ISY1Q9ULR0 285 aaKnown RBP15.58■□□□□ 0.08
THUMPD3-206ENST00000452837 AK9Q5TCS8 1911 aa15.57■□□□□ 0.08
THUMPD3-206ENST00000452837 DLG5Q8TDM6 1919 aa15.57■□□□□ 0.08
THUMPD3-206ENST00000452837 MCM10Q7L590 875 aa15.57■□□□□ 0.08
THUMPD3-206ENST00000452837 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
THUMPD3-206ENST00000452837 CDK12Q9NYV4 1490 aaPredicted RBP15.57■□□□□ 0.08
THUMPD3-206ENST00000452837 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
THUMPD3-206ENST00000452837 SDSP20132 328 aa15.57■□□□□ 0.08
THUMPD3-206ENST00000452837 INTS3Q68E01 1043 aaKnown RBP15.56■□□□□ 0.08
THUMPD3-206ENST00000452837 CEP85Q6P2H3 762 aa15.56■□□□□ 0.08
THUMPD3-206ENST00000452837 ZGPATQ8N5A5 531 aaKnown RBP15.56■□□□□ 0.08
THUMPD3-206ENST00000452837 ANKRD44Q8N8A2 993 aa15.56■□□□□ 0.08
THUMPD3-206ENST00000452837 DDX49Q9Y6V7 483 aaKnown RBP15.56■□□□□ 0.08
THUMPD3-206ENST00000452837 MCTP1Q6DN14 999 aa15.56■□□□□ 0.08
THUMPD3-206ENST00000452837 NUDT16Q96DE0 195 aaKnown RBP15.56■□□□□ 0.08
THUMPD3-206ENST00000452837 MEIS3Q99687 375 aa15.56■□□□□ 0.08
THUMPD3-206ENST00000452837 CLEC17AQ6ZS10 378 aa15.55■□□□□ 0.08
THUMPD3-206ENST00000452837 COG3Q96JB2 828 aa15.55■□□□□ 0.08
THUMPD3-206ENST00000452837 METP08581 1390 aa15.55■□□□□ 0.08
THUMPD3-206ENST00000452837 MSH6P52701 1360 aa15.55■□□□□ 0.08
THUMPD3-206ENST00000452837 RABEP1Q15276 862 aa15.55■□□□□ 0.08
THUMPD3-206ENST00000452837 SULT6B1Q6IMI4 303 aa15.54■□□□□ 0.08
THUMPD3-206ENST00000452837 A2ML1A8K2U0 1454 aa15.54■□□□□ 0.08
THUMPD3-206ENST00000452837 AATKQ6ZMQ8 1374 aa15.54■□□□□ 0.08
THUMPD3-206ENST00000452837 KLHL40Q2TBA0 621 aa15.54■□□□□ 0.08
THUMPD3-206ENST00000452837 TRIM44Q96DX7 344 aaPredicted RBP15.54■□□□□ 0.08
THUMPD3-206ENST00000452837 MIS18AQ9NYP9 233 aa15.54■□□□□ 0.08
THUMPD3-206ENST00000452837 CYP2E1P05181 493 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms