RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 SYTL4Q96C24 671 aaPredicted RBP16.6■□□□□ 0.25
ITGB4-202ENST00000449880 PLCH2O75038 1416 aa16.6■□□□□ 0.25
ITGB4-202ENST00000449880 RAD21O60216 631 aa16.59■□□□□ 0.25
ITGB4-202ENST00000449880 HIP1O00291 1037 aa16.59■□□□□ 0.25
ITGB4-202ENST00000449880 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
ITGB4-202ENST00000449880 WDR63Q8IWG1 891 aa16.59■□□□□ 0.25
ITGB4-202ENST00000449880 CNTROBQ8N137 903 aa16.59■□□□□ 0.25
ITGB4-202ENST00000449880 ATAD2Q6PL18 1390 aa16.59■□□□□ 0.25
ITGB4-202ENST00000449880 RAPGEF4Q8WZA2 1011 aa16.59■□□□□ 0.25
ITGB4-202ENST00000449880 SMARCE1Q969G3 411 aa16.58■□□□□ 0.25
ITGB4-202ENST00000449880 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
ITGB4-202ENST00000449880 ZNF396Q96N95 335 aaPredicted RBP16.58■□□□□ 0.24
ITGB4-202ENST00000449880 CALCOCO1Q9P1Z2 691 aa16.58■□□□□ 0.24
ITGB4-202ENST00000449880 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.24
ITGB4-202ENST00000449880 NSD3Q9BZ95 1437 aa16.58■□□□□ 0.24
ITGB4-202ENST00000449880 DHX16O60231 1041 aaKnown RBP16.58■□□□□ 0.24
ITGB4-202ENST00000449880 SYCP2Q9BX26 1530 aa16.57■□□□□ 0.24
ITGB4-202ENST00000449880 DYNC1I1O14576 645 aa16.57■□□□□ 0.24
ITGB4-202ENST00000449880 TSPYL4Q9UJ04 414 aa16.57■□□□□ 0.24
ITGB4-202ENST00000449880 DUOX2Q9NRD8 1548 aa16.57■□□□□ 0.24
ITGB4-202ENST00000449880 PCMTD1Q96MG8 357 aaPredicted RBP16.57■□□□□ 0.24
ITGB4-202ENST00000449880 FKBP5Q13451 457 aaPredicted RBP16.57■□□□□ 0.24
ITGB4-202ENST00000449880 DHX29Q7Z478 1369 aaKnown RBP16.57■□□□□ 0.24
ITGB4-202ENST00000449880 NEK4P51957 841 aa16.57■□□□□ 0.24
ITGB4-202ENST00000449880 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
ITGB4-202ENST00000449880 MYO6Q9UM54 1294 aa16.57■□□□□ 0.24
ITGB4-202ENST00000449880 ATF3P18847 181 aa16.56■□□□□ 0.24
ITGB4-202ENST00000449880 CLCN1P35523 988 aa16.56■□□□□ 0.24
ITGB4-202ENST00000449880 CGNQ9P2M7 1197 aaKnown RBP16.56■□□□□ 0.24
ITGB4-202ENST00000449880 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
ITGB4-202ENST00000449880 ERICH2A1L162 156 aa16.56■□□□□ 0.24
ITGB4-202ENST00000449880 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
ITGB4-202ENST00000449880 SAFBQ15424 915 aaKnown RBP eCLIP16.56■□□□□ 0.24
ITGB4-202ENST00000449880 SCAF11Q99590 1463 aaKnown RBP16.55■□□□□ 0.24
ITGB4-202ENST00000449880 PIP4K2AP48426 406 aaPredicted RBP16.55■□□□□ 0.24
ITGB4-202ENST00000449880 NLRP6P59044 892 aa16.55■□□□□ 0.24
ITGB4-202ENST00000449880 MVPQ14764 893 aaKnown RBP16.55■□□□□ 0.24
ITGB4-202ENST00000449880 ZNF692Q9BU19 519 aaPredicted RBP16.55■□□□□ 0.24
ITGB4-202ENST00000449880 SAMD9Q5K651 1589 aa16.55■□□□□ 0.24
ITGB4-202ENST00000449880 EXOSC9Q06265 439 aaKnown RBP16.55■□□□□ 0.24
ITGB4-202ENST00000449880 DEF6Q9H4E7 631 aa16.55■□□□□ 0.24
ITGB4-202ENST00000449880 DISP1Q96F81 1524 aa16.55■□□□□ 0.24
ITGB4-202ENST00000449880 CBFA2T2O43439 604 aa16.55■□□□□ 0.24
ITGB4-202ENST00000449880 NECTIN2Q92692 538 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 PLEKHH1Q9ULM0 1364 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 NUTM2GQ5VZR2 741 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 SMC2O95347 1197 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 ANKRD1Q15327 319 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 RALGAPBQ86X10 1494 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 KIAA0754O94854 1291 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 CAGE1Q8TC20 777 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 GNAI3P08754 354 aa16.54■□□□□ 0.24
ITGB4-202ENST00000449880 BCAR3O75815 825 aa16.53■□□□□ 0.24
ITGB4-202ENST00000449880 RBM33Q96EV2 1170 aaKnown RBP16.53■□□□□ 0.24
ITGB4-202ENST00000449880 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
ITGB4-202ENST00000449880 FILIP1LQ4L180 1135 aa16.53■□□□□ 0.24
ITGB4-202ENST00000449880 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
ITGB4-202ENST00000449880 FBXW7Q969H0 707 aa16.52■□□□□ 0.24
ITGB4-202ENST00000449880 TNMDQ9H2S6 317 aa16.52■□□□□ 0.24
ITGB4-202ENST00000449880 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
ITGB4-202ENST00000449880 NFXL1Q6ZNB6 911 aa16.52■□□□□ 0.24
ITGB4-202ENST00000449880 ZNF428Q96B54 188 aa16.52■□□□□ 0.24
ITGB4-202ENST00000449880 PRIMPOLQ96LW4 560 aa16.52■□□□□ 0.24
ITGB4-202ENST00000449880 KRT85P78386 507 aa16.52■□□□□ 0.24
ITGB4-202ENST00000449880 CCDC43Q96MW1 224 aaKnown RBP16.52■□□□□ 0.23
ITGB4-202ENST00000449880 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.23
ITGB4-202ENST00000449880 SHANK2Q9UPX8 1470 aa16.52■□□□□ 0.23
ITGB4-202ENST00000449880 NUP160Q12769 1436 aa16.51■□□□□ 0.23
ITGB4-202ENST00000449880 DACH1Q9UI36 760 aa16.51■□□□□ 0.23
ITGB4-202ENST00000449880 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
ITGB4-202ENST00000449880 DISP3Q9P2K9 1392 aa16.51■□□□□ 0.23
ITGB4-202ENST00000449880 PDILTQ8N807 584 aa16.51■□□□□ 0.23
ITGB4-202ENST00000449880 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
ITGB4-202ENST00000449880 SPC24Q8NBT2 197 aa16.51■□□□□ 0.23
ITGB4-202ENST00000449880 CHD1LQ86WJ1 897 aa16.51■□□□□ 0.23
ITGB4-202ENST00000449880 TSR2Q969E8 191 aaKnown RBP16.51■□□□□ 0.23
ITGB4-202ENST00000449880 ZSCAN31Q96LW9 406 aaPredicted RBP16.5■□□□□ 0.23
ITGB4-202ENST00000449880 NOS1P29475 1434 aa16.5■□□□□ 0.23
ITGB4-202ENST00000449880 ZMYND15Q9H091 742 aa16.5■□□□□ 0.23
ITGB4-202ENST00000449880 ABTB2Q8N961 1025 aa16.5■□□□□ 0.23
ITGB4-202ENST00000449880 GBP3Q9H0R5 595 aa16.5■□□□□ 0.23
ITGB4-202ENST00000449880 PATL2C9JE40 543 aaKnown RBP16.5■□□□□ 0.23
ITGB4-202ENST00000449880 FIBPO43427 364 aa16.5■□□□□ 0.23
ITGB4-202ENST00000449880 TXLNBQ8N3L3 684 aa16.5■□□□□ 0.23
ITGB4-202ENST00000449880 SRCIN1Q9C0H9 1055 aa16.49■□□□□ 0.23
ITGB4-202ENST00000449880 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
ITGB4-202ENST00000449880 RIC3Q7Z5B4 369 aa16.49■□□□□ 0.23
ITGB4-202ENST00000449880 GAS2L2Q8NHY3 880 aa16.49■□□□□ 0.23
ITGB4-202ENST00000449880 NLRP2Q9NX02 1062 aa16.49■□□□□ 0.23
ITGB4-202ENST00000449880 POGZQ7Z3K3 1410 aa16.49■□□□□ 0.23
ITGB4-202ENST00000449880 GPRASP1Q5JY77 1395 aa16.49■□□□□ 0.23
ITGB4-202ENST00000449880 IQCEQ6IPM2 695 aa16.48■□□□□ 0.23
ITGB4-202ENST00000449880 FAM107BQ9H098 131 aa16.48■□□□□ 0.23
ITGB4-202ENST00000449880 JMYQ8N9B5 988 aa16.48■□□□□ 0.23
ITGB4-202ENST00000449880 ASXL2Q76L83 1435 aa16.48■□□□□ 0.23
ITGB4-202ENST00000449880 RALYLQ86SE5 291 aaKnown RBP16.48■□□□□ 0.23
ITGB4-202ENST00000449880 WDR7Q9Y4E6 1490 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 NEMFO60524 1076 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
ITGB4-202ENST00000449880 NOB1Q9ULX3 412 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms