RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	DEFB132	Q7Z7B7	95 aa		10.72	□□□□□ -0.69
HCG18-238	ENST00000449544	NSD3	Q9BZ95	1437 aa		10.72	□□□□□ -0.69
HCG18-238	ENST00000449544	GNAT3	A8MTJ3	354 aa		10.72	□□□□□ -0.69
HCG18-238	ENST00000449544	WDHD1	O75717	1129 aa	Predicted RBP	10.72	□□□□□ -0.69
HCG18-238	ENST00000449544	ZBTB7A	O95365	584 aa		10.72	□□□□□ -0.69
HCG18-238	ENST00000449544	ST5	P78524	1137 aa		10.72	□□□□□ -0.69
HCG18-238	ENST00000449544	BEGAIN	Q9BUH8	593 aa		10.72	□□□□□ -0.69
HCG18-238	ENST00000449544	IP6K1	Q92551	441 aa		10.71	□□□□□ -0.69
HCG18-238	ENST00000449544	NBPF6	Q5VWK0	638 aa		10.71	□□□□□ -0.7
HCG18-238	ENST00000449544	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.71	□□□□□ -0.7
HCG18-238	ENST00000449544	NBPF4	Q96M43	638 aa		10.71	□□□□□ -0.7
HCG18-238	ENST00000449544	DIP2C	Q9Y2E4	1556 aa		10.71	□□□□□ -0.7
HCG18-238	ENST00000449544	PLIN1	O60240	522 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	FMNL2	Q96PY5	1086 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	PLEKHH1	Q9ULM0	1364 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	TTLL12	Q14166	644 aa	Predicted RBP	10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	SETDB2	Q96T68	719 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	PCDH11X	Q9BZA7	1347 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	PCDH11Y	Q9BZA8	1340 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	PLEKHG3	A1L390	1219 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	FAM83G	A6ND36	823 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	MAST1	Q9Y2H9	1570 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	KDM5C	P41229	1560 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	APBB1	O00213	710 aa		10.7	□□□□□ -0.7
HCG18-238	ENST00000449544	HDGFL1	Q5TGJ6	251 aa		10.69	□□□□□ -0.7
HCG18-238	ENST00000449544	JDP2	Q8WYK2	163 aa		10.69	□□□□□ -0.7
HCG18-238	ENST00000449544	CCDC87	Q9NVE4	849 aa		10.69	□□□□□ -0.7
HCG18-238	ENST00000449544	GNAI1	P63096	354 aa		10.69	□□□□□ -0.7
HCG18-238	ENST00000449544	NCBP3	Q53F19	620 aa	Known RBP	10.69	□□□□□ -0.7
HCG18-238	ENST00000449544	ARHGAP27	Q6ZUM4	889 aa		10.69	□□□□□ -0.7
HCG18-238	ENST00000449544	SMC4	Q9NTJ3	1288 aa		10.69	□□□□□ -0.7
HCG18-238	ENST00000449544	FCHSD2	O94868	740 aa		10.68	□□□□□ -0.7
HCG18-238	ENST00000449544	CCAR1	Q8IX12	1150 aa	Known RBP	10.68	□□□□□ -0.7
HCG18-238	ENST00000449544	ADGRL2	O95490	1459 aa		10.68	□□□□□ -0.7
HCG18-238	ENST00000449544	RBM5	P52756	815 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
HCG18-238	ENST00000449544	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.68	□□□□□ -0.7
HCG18-238	ENST00000449544	APAF1	O14727	1248 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	ZNF428	Q96B54	188 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	DNMT1	P26358	1616 aa	Known RBP	10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	NINL	Q9Y2I6	1382 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	BCL2L13	Q9BXK5	485 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	MAP3K4	Q9Y6R4	1608 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	SOCS7	O14512	581 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	VPS72	Q15906	364 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	MPHOSPH8	Q99549	860 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	C6orf229	H3BNL8	230 aa		10.67	□□□□□ -0.7
HCG18-238	ENST00000449544	CARD10	Q9BWT7	1032 aa		10.66	□□□□□ -0.7
HCG18-238	ENST00000449544	THRAP3	Q9Y2W1	955 aa	Known RBP	10.66	□□□□□ -0.7
HCG18-238	ENST00000449544	MAP3K19	Q56UN5	1328 aa		10.66	□□□□□ -0.7
HCG18-238	ENST00000449544	KIF7	Q2M1P5	1343 aa		10.66	□□□□□ -0.7
HCG18-238	ENST00000449544	FYB1	O15117	783 aa		10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	GPT	P24298	496 aa		10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	RUNDC1	Q96C34	613 aa		10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	CLTC	Q00610	1675 aa	Known RBP	10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	LMOD1	P29536	600 aa	Predicted RBP	10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	HOXC9	P31274	260 aa		10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	PLA2R1	Q13018	1463 aa		10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	DPY19L2	Q6NUT2	758 aa		10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	DCAF5	Q96JK2	942 aa		10.65	□□□□□ -0.7
HCG18-238	ENST00000449544	PIK3C2G	O75747	1445 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	CCDC7	Q96M83	1385 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	CPS1	P31327	1500 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	FLT4	P35916	1363 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	CCDC30	Q5VVM6	783 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	DDRGK1	Q96HY6	314 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	TPTE2	Q6XPS3	522 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	NFATC2IP	Q8NCF5	419 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	ANKIB1	Q9P2G1	1089 aa		10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	TRMT112	Q9UI30	125 aa	Known RBP	10.64	□□□□□ -0.71
HCG18-238	ENST00000449544	FER1L4	A9Z1Z3	1794 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	SLC39A6	Q13433	755 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	HSP90AB3P	Q58FF7	597 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	RAD21	O60216	631 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	DDX46	Q7L014	1031 aa	Known RBP	10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	CNNM1	Q9NRU3	951 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	TAOK2	Q9UL54	1235 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	WDR17	Q8IZU2	1322 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544		H0YIN7	160 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	POTEA	Q6S8J7	498 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	ZBTB3	Q9H5J0	574 aa		10.63	□□□□□ -0.71
HCG18-238	ENST00000449544	TAF7	Q15545	349 aa	Predicted RBP	10.62	□□□□□ -0.71
HCG18-238	ENST00000449544	NLGN1	Q8N2Q7	840 aa		10.62	□□□□□ -0.71
HCG18-238	ENST00000449544	TBC1D2B	Q9UPU7	963 aa		10.62	□□□□□ -0.71
HCG18-238	ENST00000449544	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.62	□□□□□ -0.71
HCG18-238	ENST00000449544	PRDM15	P57071	1507 aa	Predicted RBP	10.62	□□□□□ -0.71
HCG18-238	ENST00000449544	MCM10	Q7L590	875 aa		10.62	□□□□□ -0.71
HCG18-238	ENST00000449544	PPP1R42	Q7Z4L9	355 aa		10.62	□□□□□ -0.71
HCG18-238	ENST00000449544	BRD4	O60885	1362 aa	Predicted RBP	10.62	□□□□□ -0.71
HCG18-238	ENST00000449544	TMOD2	Q9NZR1	351 aa		10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	ZMYM4	Q5VZL5	1548 aa		10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	C1orf167	Q5SNV9	1468 aa		10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	ADGB	Q8N7X0	1667 aa		10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	ITPRIP	Q8IWB1	547 aa		10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	MIS18A	Q9NYP9	233 aa		10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	FAM135B	Q49AJ0	1406 aa		10.61	□□□□□ -0.71
HCG18-238	ENST00000449544	SNRPA1	P09661	255 aa	Known RBP	10.61	□□□□□ -0.71

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