RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 C6orf229H3BNL8 230 aa12.66□□□□□ -0.38
PRDM15-208ENST00000449395 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
PRDM15-208ENST00000449395 ZNF530Q6P9A1 599 aaPredicted RBP12.65□□□□□ -0.38
PRDM15-208ENST00000449395 SAFBQ15424 915 aaKnown RBP eCLIP12.65□□□□□ -0.38
PRDM15-208ENST00000449395 EP400NLQ6ZTU2 488 aa12.64□□□□□ -0.39
PRDM15-208ENST00000449395 RALYLQ86SE5 291 aaKnown RBP12.64□□□□□ -0.39
PRDM15-208ENST00000449395 CCDC73Q6ZRK6 1079 aa12.64□□□□□ -0.39
PRDM15-208ENST00000449395 FYCO1Q9BQS8 1478 aa12.64□□□□□ -0.39
PRDM15-208ENST00000449395 WASHC4Q2M389 1173 aa12.64□□□□□ -0.39
PRDM15-208ENST00000449395 FANCAO15360 1455 aa12.64□□□□□ -0.39
PRDM15-208ENST00000449395 NINLQ9Y2I6 1382 aa12.64□□□□□ -0.39
PRDM15-208ENST00000449395 NCOA2Q15596 1464 aa12.64□□□□□ -0.39
PRDM15-208ENST00000449395 PSDA5PKW4 1024 aaPredicted RBP12.64□□□□□ -0.39
PRDM15-208ENST00000449395 NPHP3Q7Z494 1330 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRDM15-208ENST00000449395 SETQ01105 290 aaPredicted RBP12.63□□□□□ -0.39
PRDM15-208ENST00000449395 WAPLQ7Z5K2 1190 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 CNTROBQ8N137 903 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 PAF1Q8N7H5 531 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 MPHOSPH8Q99549 860 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 MSL1Q68DK7 614 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 BTG4Q9NY30 223 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 HDAC9Q9UKV0 1011 aa12.63□□□□□ -0.39
PRDM15-208ENST00000449395 R3HCC1Q9Y3T6 440 aaKnown RBP12.63□□□□□ -0.39
PRDM15-208ENST00000449395 FCHSD2O94868 740 aa12.62□□□□□ -0.39
PRDM15-208ENST00000449395 ASXL2Q76L83 1435 aa12.62□□□□□ -0.39
PRDM15-208ENST00000449395 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
PRDM15-208ENST00000449395 DPY19L2Q6NUT2 758 aa12.62□□□□□ -0.39
PRDM15-208ENST00000449395 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
PRDM15-208ENST00000449395 RTEL1-TNFRSF6BF6WH68 1400 aa12.62□□□□□ -0.39
PRDM15-208ENST00000449395 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
PRDM15-208ENST00000449395 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.61□□□□□ -0.39
PRDM15-208ENST00000449395 PSMA5P28066 241 aa12.61□□□□□ -0.39
PRDM15-208ENST00000449395 CCDC30Q5VVM6 783 aa12.61□□□□□ -0.39
PRDM15-208ENST00000449395 CDCA7LQ96GN5 454 aa12.61□□□□□ -0.39
PRDM15-208ENST00000449395 TRPC5Q9UL62 973 aaPredicted RBP12.61□□□□□ -0.39
PRDM15-208ENST00000449395 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
PRDM15-208ENST00000449395 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
PRDM15-208ENST00000449395 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
PRDM15-208ENST00000449395 PPP2R1AP30153 589 aa12.61□□□□□ -0.39
PRDM15-208ENST00000449395 ABT1Q9ULW3 272 aaKnown RBP12.61□□□□□ -0.39
PRDM15-208ENST00000449395 MYO1BO43795 1136 aa12.6□□□□□ -0.39
PRDM15-208ENST00000449395 CFAP70Q5T0N1 1121 aa12.6□□□□□ -0.39
PRDM15-208ENST00000449395 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.6□□□□□ -0.39
PRDM15-208ENST00000449395 ZNF771Q7L3S4 317 aaPredicted RBP12.6□□□□□ -0.39
PRDM15-208ENST00000449395 GNAI3P08754 354 aa12.6□□□□□ -0.39
PRDM15-208ENST00000449395 CLASRPQ8N2M8 674 aaKnown RBP12.6□□□□□ -0.39
PRDM15-208ENST00000449395 CCDC85AQ96PX6 553 aaPredicted RBP12.6□□□□□ -0.39
PRDM15-208ENST00000449395 FSD1Q9BTV5 496 aa12.6□□□□□ -0.39
PRDM15-208ENST00000449395 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
PRDM15-208ENST00000449395 GAS2L2Q8NHY3 880 aa12.6□□□□□ -0.39
PRDM15-208ENST00000449395 POLA1P09884 1462 aaPredicted RBP12.59□□□□□ -0.39
PRDM15-208ENST00000449395 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
PRDM15-208ENST00000449395 FAM13BQ9NYF5 915 aa12.59□□□□□ -0.39
PRDM15-208ENST00000449395 FAM43AQ8N2R8 423 aa12.59□□□□□ -0.39
PRDM15-208ENST00000449395 SURF6O75683 361 aaKnown RBP12.59□□□□□ -0.39
PRDM15-208ENST00000449395 GNL3LQ9NVN8 582 aaKnown RBP12.59□□□□□ -0.39
PRDM15-208ENST00000449395 PRKAR2BP31323 418 aa12.58□□□□□ -0.39
PRDM15-208ENST00000449395 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.39
PRDM15-208ENST00000449395 CABP1Q9NZU7 370 aa12.58□□□□□ -0.39
PRDM15-208ENST00000449395 BRMS1Q9HCU9 246 aa12.58□□□□□ -0.4
PRDM15-208ENST00000449395 NUTM1Q86Y26 1132 aa12.58□□□□□ -0.4
PRDM15-208ENST00000449395 USHBP1Q8N6Y0 703 aa12.58□□□□□ -0.4
PRDM15-208ENST00000449395 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.4
PRDM15-208ENST00000449395 TEX35Q5T0J7 233 aa12.58□□□□□ -0.4
PRDM15-208ENST00000449395 OLFM4Q6UX06 510 aa12.58□□□□□ -0.4
PRDM15-208ENST00000449395 NAT10Q9H0A0 1025 aaKnown RBP12.58□□□□□ -0.4
PRDM15-208ENST00000449395 XBP1P17861 261 aa12.57□□□□□ -0.4
PRDM15-208ENST00000449395 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
PRDM15-208ENST00000449395 MYCP01106 439 aaPredicted RBP12.57□□□□□ -0.4
PRDM15-208ENST00000449395 NAP1L1P55209 391 aaKnown RBP12.57□□□□□ -0.4
PRDM15-208ENST00000449395 NASPP49321 788 aaPredicted RBP12.57□□□□□ -0.4
PRDM15-208ENST00000449395 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
PRDM15-208ENST00000449395 SDF4Q9BRK5 362 aa12.56□□□□□ -0.4
PRDM15-208ENST00000449395 STK11IPQ8N1F8 1099 aa12.56□□□□□ -0.4
PRDM15-208ENST00000449395 C19orf44Q9H6X5 657 aa12.56□□□□□ -0.4
PRDM15-208ENST00000449395 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
PRDM15-208ENST00000449395 TRIM37O94972 964 aa12.56□□□□□ -0.4
PRDM15-208ENST00000449395 MRE11P49959 708 aa12.56□□□□□ -0.4
PRDM15-208ENST00000449395 MNS1Q8NEH6 495 aa12.56□□□□□ -0.4
PRDM15-208ENST00000449395 DNAJC2Q99543 621 aaKnown RBP12.56□□□□□ -0.4
PRDM15-208ENST00000449395 TSPOAP1O95153 1857 aa12.56□□□□□ -0.4
PRDM15-208ENST00000449395 C1orf115Q9H7X2 142 aa12.56□□□□□ -0.4
PRDM15-208ENST00000449395 NOB1Q9ULX3 412 aaKnown RBP12.56□□□□□ -0.4
PRDM15-208ENST00000449395 VSIG10Q8N0Z9 540 aa12.55□□□□□ -0.4
PRDM15-208ENST00000449395 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
PRDM15-208ENST00000449395 TBC1D2BQ9UPU7 963 aa12.55□□□□□ -0.4
PRDM15-208ENST00000449395 NEK4P51957 841 aa12.55□□□□□ -0.4
PRDM15-208ENST00000449395 KDM4AO75164 1064 aa12.55□□□□□ -0.4
PRDM15-208ENST00000449395 GCC1Q96CN9 775 aa12.55□□□□□ -0.4
PRDM15-208ENST00000449395 HIP1O00291 1037 aa12.55□□□□□ -0.4
PRDM15-208ENST00000449395 SPINK5Q9NQ38 1064 aaPredicted RBP12.55□□□□□ -0.4
PRDM15-208ENST00000449395 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
PRDM15-208ENST00000449395 TRAK2O60296 914 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 GNAI2P04899 355 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 RNF214Q8ND24 703 aa12.54□□□□□ -0.4
PRDM15-208ENST00000449395 ZNF692Q9BU19 519 aaPredicted RBP12.54□□□□□ -0.4
PRDM15-208ENST00000449395 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms