RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 MINK1Q8N4C8 1332 aaPredicted RBP9.27□□□□□ -0.92
TRIM49C-201ENST00000448984 NSD3Q9BZ95 1437 aa9.27□□□□□ -0.92
TRIM49C-201ENST00000448984 APAF1O14727 1248 aa9.27□□□□□ -0.93
TRIM49C-201ENST00000448984 CCDC39Q9UFE4 941 aa9.27□□□□□ -0.93
TRIM49C-201ENST00000448984 ZNF445P59923 1031 aa9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 BCCIPQ9P287 314 aaKnown RBP eCLIP9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 STAG3Q9UJ98 1225 aa9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 RRP7AQ9Y3A4 280 aaKnown RBP9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 PLCB2Q00722 1185 aa9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 HSCBQ8IWL3 235 aa9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 YY1AP1Q9H869 796 aa9.26□□□□□ -0.93
TRIM49C-201ENST00000448984 SETD1AO15047 1707 aaKnown RBP9.25□□□□□ -0.93
TRIM49C-201ENST00000448984 MMP14P50281 582 aa9.25□□□□□ -0.93
TRIM49C-201ENST00000448984 ATP2B3Q16720 1220 aa9.25□□□□□ -0.93
TRIM49C-201ENST00000448984 MORC1Q86VD1 984 aa9.25□□□□□ -0.93
TRIM49C-201ENST00000448984 KLHL40Q2TBA0 621 aa9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 PRAM1Q96QH2 718 aa9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 SLC52A1Q9NWF4 448 aa9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 RPGRIP1LQ68CZ1 1315 aa9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 GOLGA6L22H0YM25 854 aa9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 RAB3GAP1Q15042 981 aa9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 ZNF771Q7L3S4 317 aaPredicted RBP9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 TNPO1Q92973 898 aaKnown RBP9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 FEZ1Q99689 392 aa9.24□□□□□ -0.93
TRIM49C-201ENST00000448984 FBLN1P23142 703 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 WAPLQ7Z5K2 1190 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 SMC5Q8IY18 1101 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 CHMP4AQ9BY43 222 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 A2ML1A8K2U0 1454 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 TULP4Q9NRJ4 1543 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 CGNL1Q0VF96 1302 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 KIAA2012Q0VF49 1180 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 NRXN3Q9Y4C0 1643 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 ZFYVE9O95405 1425 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 FER1L4A9Z1Z3 1794 aa9.23□□□□□ -0.93
TRIM49C-201ENST00000448984 SBNO2Q9Y2G9 1366 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 DUSP27Q5VZP5 1158 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 CLEC17AQ6ZS10 378 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 GGNBP2Q9H3C7 697 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 KIF3AQ9Y496 699 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 C3P01024 1663 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 ALKQ9UM73 1620 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 MTHFSP49914 203 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 SNX21Q969T3 373 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 TIGD1Q96MW7 591 aa9.22□□□□□ -0.93
TRIM49C-201ENST00000448984 TULP2O00295 520 aa9.21□□□□□ -0.94
TRIM49C-201ENST00000448984 CLGNO14967 610 aa9.21□□□□□ -0.94
TRIM49C-201ENST00000448984 KCNJ4P48050 445 aa9.21□□□□□ -0.94
TRIM49C-201ENST00000448984 FAM193AP78312 1265 aa9.21□□□□□ -0.94
TRIM49C-201ENST00000448984 AXDND1Q5T1B0 1012 aaPredicted RBP9.21□□□□□ -0.94
TRIM49C-201ENST00000448984 PDCL2Q8N4E4 241 aa9.21□□□□□ -0.94
TRIM49C-201ENST00000448984 EVC2Q86UK5 1308 aa9.21□□□□□ -0.94
TRIM49C-201ENST00000448984 GOLGA2Q08379 1002 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 DHX37Q8IY37 1157 aaKnown RBP9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 SPRYD3Q8NCJ5 442 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 OGFRQ9NZT2 677 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 PPP6R1Q9UPN7 881 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 PTPRMP28827 1452 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 ZNF521Q96K83 1311 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 BCAR3O75815 825 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 CREBRFQ8IUR6 639 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 C22orf23Q9BZE7 217 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 GEMIN8Q9NWZ8 242 aaKnown RBP9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 CALCOCO1Q9P1Z2 691 aa9.2□□□□□ -0.94
TRIM49C-201ENST00000448984 NCKAP5LQ9HCH0 1330 aa9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 NPC1L1Q9UHC9 1359 aa9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 TRHP20396 242 aaPredicted RBP9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 NKTRP30414 1462 aaKnown RBP9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 A0A1W2PP64 1363 aa9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 IGHDP01880 384 aa9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 SLFN5Q08AF3 891 aa9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 ANKRD7Q92527 254 aa9.19□□□□□ -0.94
TRIM49C-201ENST00000448984 CEBPAP49715 358 aaPredicted RBP9.18□□□□□ -0.94
TRIM49C-201ENST00000448984 HAP1P54257 671 aaPredicted RBP9.18□□□□□ -0.94
TRIM49C-201ENST00000448984 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.18□□□□□ -0.94
TRIM49C-201ENST00000448984 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
TRIM49C-201ENST00000448984 BCL2L12Q9HB09 334 aa9.18□□□□□ -0.94
TRIM49C-201ENST00000448984 CABP1Q9NZU7 370 aa9.18□□□□□ -0.94
TRIM49C-201ENST00000448984 RIMS2Q9UQ26 1411 aa9.18□□□□□ -0.94
TRIM49C-201ENST00000448984 PDE3AQ14432 1141 aa9.17□□□□□ -0.94
TRIM49C-201ENST00000448984 ZNF622Q969S3 477 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM49C-201ENST00000448984 CLUAP1Q96AJ1 413 aa9.17□□□□□ -0.94
TRIM49C-201ENST00000448984 CDK19Q9BWU1 502 aa9.17□□□□□ -0.94
TRIM49C-201ENST00000448984 EFCC1Q9HA90 598 aa9.17□□□□□ -0.94
TRIM49C-201ENST00000448984 YTHDC2Q9H6S0 1430 aaKnown RBP9.17□□□□□ -0.94
TRIM49C-201ENST00000448984 DDX49Q9Y6V7 483 aaKnown RBP9.17□□□□□ -0.94
TRIM49C-201ENST00000448984 NUTM2FA1L443 756 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 TXNDC2Q86VQ3 553 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 PIBF1Q8WXW3 757 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 TNRQ92752 1358 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 E9PSI1 815 aa9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 U2SURPO15042 1029 aaKnown RBP9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 U2AF1L5P0DN76 240 aaPredicted RBP9.16□□□□□ -0.94
TRIM49C-201ENST00000448984 PSEN1P49768 467 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms