RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 NLRP6P59044 892 aa23■■□□□ 1.27
LMNA-208ENST00000448611 HSP90AB2PQ58FF8 381 aa23■■□□□ 1.27
LMNA-208ENST00000448611 FANCIQ9NVI1 1328 aa23■■□□□ 1.27
LMNA-208ENST00000448611 SBNO1A3KN83 1393 aa22.99■■□□□ 1.27
LMNA-208ENST00000448611 RGPD1P0DJD0 1748 aa22.99■■□□□ 1.27
LMNA-208ENST00000448611 RARSP54136 660 aaKnown RBP22.98■■□□□ 1.27
LMNA-208ENST00000448611 FLT4P35916 1363 aa22.98■■□□□ 1.27
LMNA-208ENST00000448611 ESCO1Q5FWF5 840 aa22.98■■□□□ 1.27
LMNA-208ENST00000448611 ABTB2Q8N961 1025 aa22.97■■□□□ 1.27
LMNA-208ENST00000448611 TSR2Q969E8 191 aaKnown RBP22.97■■□□□ 1.27
LMNA-208ENST00000448611 PAK3O75914 559 aaPredicted RBP22.96■■□□□ 1.27
LMNA-208ENST00000448611 CT47B1P0C2W7 299 aaPredicted RBP22.95■■□□□ 1.26
LMNA-208ENST00000448611 LTBP4Q8N2S1 1624 aa22.94■■□□□ 1.26
LMNA-208ENST00000448611 NUTM2GQ5VZR2 741 aa22.94■■□□□ 1.26
LMNA-208ENST00000448611 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
LMNA-208ENST00000448611 KIF24Q5T7B8 1368 aa22.94■■□□□ 1.26
LMNA-208ENST00000448611 SULT6B1Q6IMI4 303 aa22.94■■□□□ 1.26
LMNA-208ENST00000448611 AMPHP49418 695 aa22.92■■□□□ 1.26
LMNA-208ENST00000448611 PSME1Q06323 249 aa22.92■■□□□ 1.26
LMNA-208ENST00000448611 ORAI2Q96SN7 254 aa22.92■■□□□ 1.26
LMNA-208ENST00000448611 C19orf44Q9H6X5 657 aa22.92■■□□□ 1.26
LMNA-208ENST00000448611 ARHGEF10O15013 1369 aa22.92■■□□□ 1.26
LMNA-208ENST00000448611 EXOSC9Q06265 439 aaKnown RBP22.92■■□□□ 1.26
LMNA-208ENST00000448611 PDE3AQ14432 1141 aa22.92■■□□□ 1.26
LMNA-208ENST00000448611 NCOA3Q9Y6Q9 1424 aa22.92■■□□□ 1.26
LMNA-208ENST00000448611 XIRP1Q702N8 1843 aaKnown RBP22.91■■□□□ 1.26
LMNA-208ENST00000448611 DLG5Q8TDM6 1919 aa22.9■■□□□ 1.26
LMNA-208ENST00000448611 LMOD3Q0VAK6 560 aa22.9■■□□□ 1.26
LMNA-208ENST00000448611 MSH6P52701 1360 aa22.9■■□□□ 1.26
LMNA-208ENST00000448611 C1orf167Q5SNV9 1468 aa22.9■■□□□ 1.26
LMNA-208ENST00000448611 CALD1Q05682 793 aaKnown RBP22.89■■□□□ 1.25
LMNA-208ENST00000448611 HOXC9P31274 260 aa22.88■■□□□ 1.25
LMNA-208ENST00000448611 THUMPD2Q9BTF0 503 aaKnown RBP22.88■■□□□ 1.25
LMNA-208ENST00000448611 KDRP35968 1356 aa22.87■■□□□ 1.25
LMNA-208ENST00000448611 ATF3P18847 181 aa22.87■■□□□ 1.25
LMNA-208ENST00000448611 NFAT5O94916 1531 aa22.87■■□□□ 1.25
LMNA-208ENST00000448611 IGSF1Q8N6C5 1336 aa22.87■■□□□ 1.25
LMNA-208ENST00000448611 BCL2L13Q9BXK5 485 aa22.86■■□□□ 1.25
LMNA-208ENST00000448611 RTL1A6NKG5 1358 aa22.86■■□□□ 1.25
LMNA-208ENST00000448611 KIF1AQ12756 1690 aa22.86■■□□□ 1.25
LMNA-208ENST00000448611 FOXO3O43524 673 aa22.86■■□□□ 1.25
LMNA-208ENST00000448611 CANXP27824 592 aaKnown RBP22.86■■□□□ 1.25
LMNA-208ENST00000448611 FRAT1Q92837 279 aaPredicted RBP22.86■■□□□ 1.25
LMNA-208ENST00000448611 DCCP43146 1447 aa22.85■■□□□ 1.25
LMNA-208ENST00000448611 ZNF853P0CG23 659 aa22.85■■□□□ 1.25
LMNA-208ENST00000448611 IFT57Q9NWB7 429 aa22.85■■□□□ 1.25
LMNA-208ENST00000448611 EYA1Q99502 592 aa22.84■■□□□ 1.25
LMNA-208ENST00000448611 GNAI1P63096 354 aa22.84■■□□□ 1.25
LMNA-208ENST00000448611 CADPS2Q86UW7 1296 aa22.84■■□□□ 1.25
LMNA-208ENST00000448611 MST1RQ04912 1400 aa22.83■■□□□ 1.25
LMNA-208ENST00000448611 TRPM3Q9HCF6 1732 aaPredicted RBP22.83■■□□□ 1.25
LMNA-208ENST00000448611 PANK1Q8TE04 598 aa22.83■■□□□ 1.25
LMNA-208ENST00000448611 FAM83GA6ND36 823 aa22.82■■□□□ 1.24
LMNA-208ENST00000448611 LTN1O94822 1766 aa22.82■■□□□ 1.24
LMNA-208ENST00000448611 LAS1LQ9Y4W2 734 aaKnown RBP22.82■■□□□ 1.24
LMNA-208ENST00000448611 XPCQ01831 940 aaPredicted RBP22.81■■□□□ 1.24
LMNA-208ENST00000448611 KCNH5Q8NCM2 988 aa22.81■■□□□ 1.24
LMNA-208ENST00000448611 SSH1Q8WYL5 1049 aa22.81■■□□□ 1.24
LMNA-208ENST00000448611 CFAP44Q96MT7 982 aa22.8■■□□□ 1.24
LMNA-208ENST00000448611 KDM2BQ8NHM5 1336 aa22.8■■□□□ 1.24
LMNA-208ENST00000448611 SLIT3O75094 1523 aa22.8■■□□□ 1.24
LMNA-208ENST00000448611 MBIPQ9NS73 344 aa22.8■■□□□ 1.24
LMNA-208ENST00000448611 SMC4Q9NTJ3 1288 aa22.8■■□□□ 1.24
LMNA-208ENST00000448611 DCTN1Q14203 1278 aa22.79■■□□□ 1.24
LMNA-208ENST00000448611 KRT28Q7Z3Y7 464 aa22.79■■□□□ 1.24
LMNA-208ENST00000448611 COG6Q9Y2V7 657 aa22.79■■□□□ 1.24
LMNA-208ENST00000448611 RBM19Q9Y4C8 960 aaKnown RBP22.79■■□□□ 1.24
LMNA-208ENST00000448611 PHRF1Q9P1Y6 1649 aaKnown RBP22.79■■□□□ 1.24
LMNA-208ENST00000448611 RLBP1P12271 317 aa22.78■■□□□ 1.24
LMNA-208ENST00000448611 IP6K1Q92551 441 aa22.78■■□□□ 1.24
LMNA-208ENST00000448611 TNNQ9UQP3 1299 aa22.78■■□□□ 1.24
LMNA-208ENST00000448611 ZKSCAN2Q63HK3 967 aa22.78■■□□□ 1.24
LMNA-208ENST00000448611 ZNF428Q96B54 188 aa22.78■■□□□ 1.24
LMNA-208ENST00000448611 ALDH1L2Q3SY69 923 aa22.76■■□□□ 1.23
LMNA-208ENST00000448611 USP19O94966 1318 aa22.76■■□□□ 1.23
LMNA-208ENST00000448611 MTHFSDQ2M296 383 aaKnown RBP22.76■■□□□ 1.23
LMNA-208ENST00000448611 CENPQQ7L2Z9 268 aaPredicted RBP22.75■■□□□ 1.23
LMNA-208ENST00000448611 CERKQ8TCT0 537 aa22.75■■□□□ 1.23
LMNA-208ENST00000448611 VAMP4O75379 141 aa22.74■■□□□ 1.23
LMNA-208ENST00000448611 GCP02774 474 aa22.74■■□□□ 1.23
LMNA-208ENST00000448611 SLAIN2Q9P270 581 aa22.74■■□□□ 1.23
LMNA-208ENST00000448611 MCM10Q7L590 875 aa22.74■■□□□ 1.23
LMNA-208ENST00000448611 CLUAP1Q96AJ1 413 aa22.73■■□□□ 1.23
LMNA-208ENST00000448611 LTV1Q96GA3 475 aaPredicted RBP22.73■■□□□ 1.23
LMNA-208ENST00000448611 ALS2Q96Q42 1657 aa22.73■■□□□ 1.23
LMNA-208ENST00000448611 BRPF1P55201 1214 aaPredicted RBP22.72■■□□□ 1.23
LMNA-208ENST00000448611 AAMPQ13685 434 aa22.72■■□□□ 1.23
LMNA-208ENST00000448611 TSPYL6Q8N831 410 aa22.72■■□□□ 1.23
LMNA-208ENST00000448611 GAS2L2Q8NHY3 880 aa22.72■■□□□ 1.23
LMNA-208ENST00000448611 CRB1P82279 1406 aa22.72■■□□□ 1.23
LMNA-208ENST00000448611 MS4A1P11836 297 aa22.72■■□□□ 1.23
LMNA-208ENST00000448611 TRIM27P14373 513 aa22.72■■□□□ 1.23
LMNA-208ENST00000448611 ARHGEF25Q86VW2 580 aa22.72■■□□□ 1.23
LMNA-208ENST00000448611 DZIP1LQ8IYY4 767 aaKnown RBP22.72■■□□□ 1.23
LMNA-208ENST00000448611 KIF16BQ96L93 1317 aa22.71■■□□□ 1.23
LMNA-208ENST00000448611 CHL1O00533 1208 aa22.71■■□□□ 1.23
LMNA-208ENST00000448611 NOB1Q9ULX3 412 aaKnown RBP22.71■■□□□ 1.23
LMNA-208ENST00000448611 LMOD2Q6P5Q4 547 aa22.7■■□□□ 1.23
LMNA-208ENST00000448611 ATF7IPQ6VMQ6 1270 aa22.7■■□□□ 1.23
LMNA-208ENST00000448611 MVPQ14764 893 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms