RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 LAS1LQ9Y4W2 734 aaKnown RBP21.88■■□□□ 1.09
CDKN1A-204ENST00000448526 USP6P35125 1406 aa21.88■■□□□ 1.09
CDKN1A-204ENST00000448526 OVOS2A0A0J9YW53 1432 aa21.88■■□□□ 1.09
CDKN1A-204ENST00000448526 OVOS2Q6IE36 1432 aa21.88■■□□□ 1.09
CDKN1A-204ENST00000448526 ATF7IPQ6VMQ6 1270 aa21.88■■□□□ 1.09
CDKN1A-204ENST00000448526 SSH2Q76I76 1423 aa21.84■■□□□ 1.09
CDKN1A-204ENST00000448526 VIRMAQ69YN4 1812 aaKnown RBP21.84■■□□□ 1.09
CDKN1A-204ENST00000448526 THEMISQ8N1K5 641 aaPredicted RBP21.84■■□□□ 1.09
CDKN1A-204ENST00000448526 PTCH1Q13635 1447 aa21.84■■□□□ 1.09
CDKN1A-204ENST00000448526 RGPD8O14715 1765 aaPredicted RBP21.84■■□□□ 1.09
CDKN1A-204ENST00000448526 NALCNQ8IZF0 1738 aa21.84■■□□□ 1.09
CDKN1A-204ENST00000448526 EIF4A2Q14240 407 aaKnown RBP21.83■■□□□ 1.09
CDKN1A-204ENST00000448526 PEAK1Q9H792 1746 aa21.83■■□□□ 1.09
CDKN1A-204ENST00000448526 ZNF853P0CG23 659 aa21.83■■□□□ 1.08
CDKN1A-204ENST00000448526 ALDH1L2Q3SY69 923 aa21.83■■□□□ 1.08
CDKN1A-204ENST00000448526 TMEM57Q8N5G2 664 aa21.83■■□□□ 1.08
CDKN1A-204ENST00000448526 PDZRN3Q9UPQ7 1066 aa21.83■■□□□ 1.08
CDKN1A-204ENST00000448526 AEBP1Q8IUX7 1158 aa21.82■■□□□ 1.08
CDKN1A-204ENST00000448526 ITPRIPQ8IWB1 547 aa21.82■■□□□ 1.08
CDKN1A-204ENST00000448526 RWDD1Q9H446 243 aaPredicted RBP21.82■■□□□ 1.08
CDKN1A-204ENST00000448526 TSPYL6Q8N831 410 aa21.82■■□□□ 1.08
CDKN1A-204ENST00000448526 IFT57Q9NWB7 429 aa21.82■■□□□ 1.08
CDKN1A-204ENST00000448526 FAM83GA6ND36 823 aa21.81■■□□□ 1.08
CDKN1A-204ENST00000448526 NBR1Q14596 966 aa21.81■■□□□ 1.08
CDKN1A-204ENST00000448526 DIP2AQ14689 1571 aa21.81■■□□□ 1.08
CDKN1A-204ENST00000448526 KIF16BQ96L93 1317 aa21.81■■□□□ 1.08
CDKN1A-204ENST00000448526 VAMP4O75379 141 aa21.8■■□□□ 1.08
CDKN1A-204ENST00000448526 MBIPQ9NS73 344 aa21.8■■□□□ 1.08
CDKN1A-204ENST00000448526 USP31Q70CQ4 1352 aa21.8■■□□□ 1.08
CDKN1A-204ENST00000448526 GNAI1P63096 354 aa21.8■■□□□ 1.08
CDKN1A-204ENST00000448526 CALD1Q05682 793 aaKnown RBP21.8■■□□□ 1.08
CDKN1A-204ENST00000448526 DDX19BQ9UMR2 479 aa21.8■■□□□ 1.08
CDKN1A-204ENST00000448526 XRN1Q8IZH2 1706 aaKnown RBP21.79■■□□□ 1.08
CDKN1A-204ENST00000448526 TRHP20396 242 aaPredicted RBP21.79■■□□□ 1.08
CDKN1A-204ENST00000448526 DCTN1Q14203 1278 aa21.79■■□□□ 1.08
CDKN1A-204ENST00000448526 HSP90AB2PQ58FF8 381 aa21.79■■□□□ 1.08
CDKN1A-204ENST00000448526 SULT6B1Q6IMI4 303 aa21.78■■□□□ 1.08
CDKN1A-204ENST00000448526 DDRGK1Q96HY6 314 aa21.78■■□□□ 1.08
CDKN1A-204ENST00000448526 SOX12O15370 315 aa21.77■■□□□ 1.08
CDKN1A-204ENST00000448526 IPO8O15397 1037 aaKnown RBP21.77■■□□□ 1.08
CDKN1A-204ENST00000448526 BRPF1P55201 1214 aaPredicted RBP21.77■■□□□ 1.08
CDKN1A-204ENST00000448526 ZNF428Q96B54 188 aa21.77■■□□□ 1.08
CDKN1A-204ENST00000448526 ELL2O00472 640 aaPredicted RBP21.76■■□□□ 1.07
CDKN1A-204ENST00000448526 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
CDKN1A-204ENST00000448526 MRPL50Q8N5N7 158 aaKnown RBP21.76■■□□□ 1.07
CDKN1A-204ENST00000448526 CFAP44Q96MT7 982 aa21.76■■□□□ 1.07
CDKN1A-204ENST00000448526 ZBTB40Q9NUA8 1239 aa21.76■■□□□ 1.07
CDKN1A-204ENST00000448526 RGPD1P0DJD0 1748 aa21.76■■□□□ 1.07
CDKN1A-204ENST00000448526 SEC24BO95487 1268 aa21.75■■□□□ 1.07
CDKN1A-204ENST00000448526 KCNA6P17658 529 aa21.74■■□□□ 1.07
CDKN1A-204ENST00000448526 HDAC1Q13547 482 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-204ENST00000448526 C8orf58Q8NAV2 365 aa21.74■■□□□ 1.07
CDKN1A-204ENST00000448526 USP19O94966 1318 aa21.74■■□□□ 1.07
CDKN1A-204ENST00000448526 TTC21AQ8NDW8 1320 aa21.74■■□□□ 1.07
CDKN1A-204ENST00000448526 CEP170BQ9Y4F5 1589 aaPredicted RBP21.74■■□□□ 1.07
CDKN1A-204ENST00000448526 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
CDKN1A-204ENST00000448526 SLC4A3P48751 1232 aa21.73■■□□□ 1.07
CDKN1A-204ENST00000448526 MAP3K19Q56UN5 1328 aa21.73■■□□□ 1.07
CDKN1A-204ENST00000448526 TWISTNBQ3B726 338 aaPredicted RBP21.72■■□□□ 1.07
CDKN1A-204ENST00000448526 PIK3C2AO00443 1686 aa21.72■■□□□ 1.07
CDKN1A-204ENST00000448526 RIMS1Q86UR5 1692 aaKnown RBP21.71■■□□□ 1.07
CDKN1A-204ENST00000448526 FMN2Q9NZ56 1722 aa21.71■■□□□ 1.07
CDKN1A-204ENST00000448526 ARHGAP45Q92619 1136 aa21.68■■□□□ 1.06
CDKN1A-204ENST00000448526 SMC5Q8IY18 1101 aa21.68■■□□□ 1.06
CDKN1A-204ENST00000448526 PIK3R4Q99570 1358 aa21.68■■□□□ 1.06
CDKN1A-204ENST00000448526 MCM10Q7L590 875 aa21.67■■□□□ 1.06
CDKN1A-204ENST00000448526 ANKARQ7Z5J8 1434 aa21.67■■□□□ 1.06
CDKN1A-204ENST00000448526 ZBTB7BO15156 539 aaPredicted RBP21.66■■□□□ 1.06
CDKN1A-204ENST00000448526 SBNO1A3KN83 1393 aa21.66■■□□□ 1.06
CDKN1A-204ENST00000448526 MARF1Q9Y4F3 1742 aaKnown RBP21.66■■□□□ 1.06
CDKN1A-204ENST00000448526 ARHGEF10O15013 1369 aa21.65■■□□□ 1.06
CDKN1A-204ENST00000448526 FLT4P35916 1363 aa21.65■■□□□ 1.06
CDKN1A-204ENST00000448526 KRT24Q2M2I5 525 aa21.65■■□□□ 1.06
CDKN1A-204ENST00000448526 ABCC4O15439 1325 aa21.65■■□□□ 1.06
CDKN1A-204ENST00000448526 CHL1O00533 1208 aa21.64■■□□□ 1.05
CDKN1A-204ENST00000448526 NUTM2GQ5VZR2 741 aa21.63■■□□□ 1.05
CDKN1A-204ENST00000448526 CHD2O14647 1828 aaKnown RBP21.63■■□□□ 1.05
CDKN1A-204ENST00000448526 FOXO3O43524 673 aa21.62■■□□□ 1.05
CDKN1A-204ENST00000448526 NLRP6P59044 892 aa21.62■■□□□ 1.05
CDKN1A-204ENST00000448526 AMPHP49418 695 aa21.62■■□□□ 1.05
CDKN1A-204ENST00000448526 C1orf115Q9H7X2 142 aa21.62■■□□□ 1.05
CDKN1A-204ENST00000448526 CRB1P82279 1406 aa21.61■■□□□ 1.05
CDKN1A-204ENST00000448526 MTHFSDQ2M296 383 aaKnown RBP21.61■■□□□ 1.05
CDKN1A-204ENST00000448526 EYA1Q99502 592 aa21.61■■□□□ 1.05
CDKN1A-204ENST00000448526 RBM33Q96EV2 1170 aaKnown RBP21.61■■□□□ 1.05
CDKN1A-204ENST00000448526 KDRP35968 1356 aa21.6■■□□□ 1.05
CDKN1A-204ENST00000448526 IGSF1Q8N6C5 1336 aa21.59■■□□□ 1.05
CDKN1A-204ENST00000448526 NUCB1Q02818 461 aa21.59■■□□□ 1.05
CDKN1A-204ENST00000448526 ANKLE2Q86XL3 938 aa21.59■■□□□ 1.05
CDKN1A-204ENST00000448526 API5Q9BZZ5 524 aaKnown RBP21.58■■□□□ 1.04
CDKN1A-204ENST00000448526 DAXXQ9UER7 740 aaPredicted RBP21.58■■□□□ 1.04
CDKN1A-204ENST00000448526 ZNF142P52746 1687 aaPredicted RBP21.58■■□□□ 1.04
CDKN1A-204ENST00000448526 USP54Q70EL1 1684 aa21.57■■□□□ 1.04
CDKN1A-204ENST00000448526 SIRT2Q8IXJ6 389 aa21.57■■□□□ 1.04
CDKN1A-204ENST00000448526 KIAA0232Q92628 1395 aa21.56■■□□□ 1.04
CDKN1A-204ENST00000448526 MIS18AQ9NYP9 233 aa21.56■■□□□ 1.04
CDKN1A-204ENST00000448526 HOXC9P31274 260 aa21.56■■□□□ 1.04
CDKN1A-204ENST00000448526 RTL5Q5HYW3 569 aaPredicted RBP21.56■■□□□ 1.04
CDKN1A-204ENST00000448526 ABTB2Q8N961 1025 aa21.56■■□□□ 1.04
CDKN1A-204ENST00000448526 LNPKQ9C0E8 428 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms