RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 HSP90AB2PQ58FF8 381 aa22.56■■□□□ 1.2
SMC6-206ENST00000446852 CT47B1P0C2W7 299 aaPredicted RBP22.55■■□□□ 1.2
SMC6-206ENST00000446852 MAP3K19Q56UN5 1328 aa22.55■■□□□ 1.2
SMC6-206ENST00000446852 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
SMC6-206ENST00000446852 TNNQ9UQP3 1299 aa22.54■■□□□ 1.2
SMC6-206ENST00000446852 NWD1Q149M9 1564 aa22.54■■□□□ 1.2
SMC6-206ENST00000446852 COG6Q9Y2V7 657 aa22.53■■□□□ 1.2
SMC6-206ENST00000446852 THUMPD2Q9BTF0 503 aaKnown RBP22.53■■□□□ 1.2
SMC6-206ENST00000446852 RLBP1P12271 317 aa22.52■■□□□ 1.2
SMC6-206ENST00000446852 CENPQQ7L2Z9 268 aaPredicted RBP22.51■■□□□ 1.19
SMC6-206ENST00000446852 SKAP1Q86WV1 359 aa22.51■■□□□ 1.19
SMC6-206ENST00000446852 SBNO1A3KN83 1393 aa22.51■■□□□ 1.19
SMC6-206ENST00000446852 SULT6B1Q6IMI4 303 aa22.51■■□□□ 1.19
SMC6-206ENST00000446852 FLT4P35916 1363 aa22.5■■□□□ 1.19
SMC6-206ENST00000446852 NLRP6P59044 892 aa22.5■■□□□ 1.19
SMC6-206ENST00000446852 PHF8Q9UPP1 1060 aa22.5■■□□□ 1.19
SMC6-206ENST00000446852 TCERG1O14776 1098 aaKnown RBP22.49■■□□□ 1.19
SMC6-206ENST00000446852 NUTM2GQ5VZR2 741 aa22.48■■□□□ 1.19
SMC6-206ENST00000446852 SSH1Q8WYL5 1049 aa22.48■■□□□ 1.19
SMC6-206ENST00000446852 SMC4Q9NTJ3 1288 aa22.48■■□□□ 1.19
SMC6-206ENST00000446852 LAS1LQ9Y4W2 734 aaKnown RBP22.47■■□□□ 1.19
SMC6-206ENST00000446852 CLUAP1Q96AJ1 413 aa22.47■■□□□ 1.19
SMC6-206ENST00000446852 FAM83GA6ND36 823 aa22.46■■□□□ 1.19
SMC6-206ENST00000446852 CALD1Q05682 793 aaKnown RBP22.46■■□□□ 1.19
SMC6-206ENST00000446852 ABTB2Q8N961 1025 aa22.46■■□□□ 1.19
SMC6-206ENST00000446852 LTN1O94822 1766 aa22.45■■□□□ 1.19
SMC6-206ENST00000446852 ARHGEF10O15013 1369 aa22.45■■□□□ 1.18
SMC6-206ENST00000446852 PAK3O75914 559 aaPredicted RBP22.45■■□□□ 1.18
SMC6-206ENST00000446852 IFT57Q9NWB7 429 aa22.45■■□□□ 1.18
SMC6-206ENST00000446852 ZNF853P0CG23 659 aa22.45■■□□□ 1.18
SMC6-206ENST00000446852 LMOD3Q0VAK6 560 aa22.45■■□□□ 1.18
SMC6-206ENST00000446852 ZKSCAN2Q63HK3 967 aa22.45■■□□□ 1.18
SMC6-206ENST00000446852 AMPHP49418 695 aa22.43■■□□□ 1.18
SMC6-206ENST00000446852 GNAI1P63096 354 aa22.43■■□□□ 1.18
SMC6-206ENST00000446852 DCTN1Q14203 1278 aa22.42■■□□□ 1.18
SMC6-206ENST00000446852 ESCO1Q5FWF5 840 aa22.42■■□□□ 1.18
SMC6-206ENST00000446852 C14orf37Q86TY3 774 aa22.42■■□□□ 1.18
SMC6-206ENST00000446852 MBIPQ9NS73 344 aa22.42■■□□□ 1.18
SMC6-206ENST00000446852 IGHDP01880 384 aa22.41■■□□□ 1.18
SMC6-206ENST00000446852 MS4A1P11836 297 aa22.41■■□□□ 1.18
SMC6-206ENST00000446852 TRIM27P14373 513 aa22.41■■□□□ 1.18
SMC6-206ENST00000446852 KDRP35968 1356 aa22.41■■□□□ 1.18
SMC6-206ENST00000446852 DZIP1LQ8IYY4 767 aaKnown RBP22.4■■□□□ 1.18
SMC6-206ENST00000446852 CFAP44Q96MT7 982 aa22.4■■□□□ 1.18
SMC6-206ENST00000446852 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
SMC6-206ENST00000446852 IGSF1Q8N6C5 1336 aa22.39■■□□□ 1.18
SMC6-206ENST00000446852 STRCP1A6NGW2 1772 aa22.39■■□□□ 1.17
SMC6-206ENST00000446852 MVPQ14764 893 aaKnown RBP22.39■■□□□ 1.17
SMC6-206ENST00000446852 ALDH1L2Q3SY69 923 aa22.39■■□□□ 1.17
SMC6-206ENST00000446852 NOB1Q9ULX3 412 aaKnown RBP22.39■■□□□ 1.17
SMC6-206ENST00000446852 NFAT5O94916 1531 aa22.39■■□□□ 1.17
SMC6-206ENST00000446852 HOXC9P31274 260 aa22.38■■□□□ 1.17
SMC6-206ENST00000446852 FTSJ3Q8IY81 847 aaKnown RBP22.38■■□□□ 1.17
SMC6-206ENST00000446852 TSPYL6Q8N831 410 aa22.38■■□□□ 1.17
SMC6-206ENST00000446852 EYA1Q99502 592 aa22.38■■□□□ 1.17
SMC6-206ENST00000446852 AAMPQ13685 434 aa22.38■■□□□ 1.17
SMC6-206ENST00000446852 ATF7IPQ6VMQ6 1270 aa22.38■■□□□ 1.17
SMC6-206ENST00000446852 ORAI2Q96SN7 254 aa22.37■■□□□ 1.17
SMC6-206ENST00000446852 VAMP4O75379 141 aa22.37■■□□□ 1.17
SMC6-206ENST00000446852 PSME1Q06323 249 aa22.37■■□□□ 1.17
SMC6-206ENST00000446852 KIF16BQ96L93 1317 aa22.37■■□□□ 1.17
SMC6-206ENST00000446852 PROSER2Q86WR7 435 aaPredicted RBP22.36■■□□□ 1.17
SMC6-206ENST00000446852 ZNF428Q96B54 188 aa22.36■■□□□ 1.17
SMC6-206ENST00000446852 PCDHB15Q9Y5E8 787 aa22.36■■□□□ 1.17
SMC6-206ENST00000446852 PDE4AP27815 886 aa22.36■■□□□ 1.17
SMC6-206ENST00000446852 TRPM3Q9HCF6 1732 aaPredicted RBP22.34■■□□□ 1.17
SMC6-206ENST00000446852 MSH5O43196 834 aa22.34■■□□□ 1.17
SMC6-206ENST00000446852 MCM10Q7L590 875 aa22.34■■□□□ 1.17
SMC6-206ENST00000446852 BACH2Q9BYV9 841 aa22.34■■□□□ 1.17
SMC6-206ENST00000446852 RTL1A6NKG5 1358 aa22.33■■□□□ 1.17
SMC6-206ENST00000446852 ELL2O00472 640 aaPredicted RBP22.33■■□□□ 1.17
SMC6-206ENST00000446852 BRPF1P55201 1214 aaPredicted RBP22.33■■□□□ 1.17
SMC6-206ENST00000446852 C8orf58Q8NAV2 365 aa22.33■■□□□ 1.17
SMC6-206ENST00000446852 MTHFSDQ2M296 383 aaKnown RBP22.33■■□□□ 1.16
SMC6-206ENST00000446852 PHRF1Q9P1Y6 1649 aaKnown RBP22.32■■□□□ 1.16
SMC6-206ENST00000446852 FOXO3O43524 673 aa22.32■■□□□ 1.16
SMC6-206ENST00000446852 KIF1AQ12756 1690 aa22.32■■□□□ 1.16
SMC6-206ENST00000446852 TWISTNBQ3B726 338 aaPredicted RBP22.32■■□□□ 1.16
SMC6-206ENST00000446852 IPO8O15397 1037 aaKnown RBP22.31■■□□□ 1.16
SMC6-206ENST00000446852 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
SMC6-206ENST00000446852 MRPL50Q8N5N7 158 aaKnown RBP22.31■■□□□ 1.16
SMC6-206ENST00000446852 C1orf167Q5SNV9 1468 aa22.31■■□□□ 1.16
SMC6-206ENST00000446852 CRB1P82279 1406 aa22.3■■□□□ 1.16
SMC6-206ENST00000446852 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
SMC6-206ENST00000446852 ITPRIPQ8IWB1 547 aa22.3■■□□□ 1.16
SMC6-206ENST00000446852 RGPD2P0DJD1 1756 aa22.29■■□□□ 1.16
SMC6-206ENST00000446852 CHL1O00533 1208 aa22.29■■□□□ 1.16
SMC6-206ENST00000446852 RGS3P49796 1198 aa22.29■■□□□ 1.16
SMC6-206ENST00000446852 LTV1Q96GA3 475 aaPredicted RBP22.29■■□□□ 1.16
SMC6-206ENST00000446852 C19orf44Q9H6X5 657 aa22.29■■□□□ 1.16
SMC6-206ENST00000446852 LRRC37A3O60309 1634 aa22.28■■□□□ 1.16
SMC6-206ENST00000446852 DDX19BQ9UMR2 479 aa22.28■■□□□ 1.16
SMC6-206ENST00000446852 SLIT3O75094 1523 aa22.28■■□□□ 1.16
SMC6-206ENST00000446852 IP6K1Q92551 441 aa22.26■■□□□ 1.15
SMC6-206ENST00000446852 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
SMC6-206ENST00000446852 HSPA2P54652 639 aa22.25■■□□□ 1.15
SMC6-206ENST00000446852 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
SMC6-206ENST00000446852 KCNH5Q8NCM2 988 aa22.25■■□□□ 1.15
SMC6-206ENST00000446852 GAS2L2Q8NHY3 880 aa22.25■■□□□ 1.15
SMC6-206ENST00000446852 ALS2Q96Q42 1657 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms