RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 KIF20BQ96Q89 1820 aa12.56□□□□□ -0.4
LINC01949-201ENST00000445770 ADAMTS13Q76LX8 1427 aa12.56□□□□□ -0.4
LINC01949-201ENST00000445770 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
LINC01949-201ENST00000445770 USP19O94966 1318 aa12.55□□□□□ -0.4
LINC01949-201ENST00000445770 PTPRUQ92729 1446 aa12.55□□□□□ -0.4
LINC01949-201ENST00000445770 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
LINC01949-201ENST00000445770 EDC4Q6P2E9 1401 aaKnown RBP12.55□□□□□ -0.4
LINC01949-201ENST00000445770 ATP7BP35670 1465 aa12.55□□□□□ -0.4
LINC01949-201ENST00000445770 C14orf37Q86TY3 774 aa12.54□□□□□ -0.4
LINC01949-201ENST00000445770 LTV1Q96GA3 475 aaPredicted RBP12.54□□□□□ -0.4
LINC01949-201ENST00000445770 ZBTB7CA1YPR0 619 aa12.54□□□□□ -0.4
LINC01949-201ENST00000445770 LNPKQ9C0E8 428 aa12.54□□□□□ -0.4
LINC01949-201ENST00000445770 MED14O60244 1454 aa12.54□□□□□ -0.4
LINC01949-201ENST00000445770 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
LINC01949-201ENST00000445770 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
LINC01949-201ENST00000445770 NGDNQ8NEJ9 315 aaKnown RBP12.53□□□□□ -0.4
LINC01949-201ENST00000445770 RWDD1Q9H446 243 aaPredicted RBP12.53□□□□□ -0.4
LINC01949-201ENST00000445770 REREQ9P2R6 1566 aa12.52□□□□□ -0.4
LINC01949-201ENST00000445770 VAMP4O75379 141 aa12.52□□□□□ -0.41
LINC01949-201ENST00000445770 ANKRD26Q9UPS8 1709 aa12.52□□□□□ -0.41
LINC01949-201ENST00000445770 NECTIN2Q92692 538 aa12.52□□□□□ -0.41
LINC01949-201ENST00000445770 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.51□□□□□ -0.41
LINC01949-201ENST00000445770 APBB1O00213 710 aa12.51□□□□□ -0.41
LINC01949-201ENST00000445770 KCNA6P17658 529 aa12.51□□□□□ -0.41
LINC01949-201ENST00000445770 TWISTNBQ3B726 338 aaPredicted RBP12.51□□□□□ -0.41
LINC01949-201ENST00000445770 EID1Q9Y6B2 187 aa12.51□□□□□ -0.41
LINC01949-201ENST00000445770 DLC1Q96QB1 1528 aa12.51□□□□□ -0.41
LINC01949-201ENST00000445770 MFAP1P55081 439 aaKnown RBP12.51□□□□□ -0.41
LINC01949-201ENST00000445770 HDGFP51858 240 aaKnown RBP12.5□□□□□ -0.41
LINC01949-201ENST00000445770 UBR1Q8IWV7 1749 aa12.5□□□□□ -0.41
LINC01949-201ENST00000445770 USHBP1Q8N6Y0 703 aa12.5□□□□□ -0.41
LINC01949-201ENST00000445770 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
LINC01949-201ENST00000445770 XPCQ01831 940 aaPredicted RBP12.49□□□□□ -0.41
LINC01949-201ENST00000445770 DDX19BQ9UMR2 479 aa12.49□□□□□ -0.41
LINC01949-201ENST00000445770 MAP3K19Q56UN5 1328 aa12.49□□□□□ -0.41
LINC01949-201ENST00000445770 CDC42BPGQ6DT37 1551 aa12.49□□□□□ -0.41
LINC01949-201ENST00000445770 MRPL50Q8N5N7 158 aaKnown RBP12.48□□□□□ -0.41
LINC01949-201ENST00000445770 DDRGK1Q96HY6 314 aa12.48□□□□□ -0.41
LINC01949-201ENST00000445770 FRAT2O75474 233 aaPredicted RBP12.47□□□□□ -0.41
LINC01949-201ENST00000445770 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
LINC01949-201ENST00000445770 IL16Q14005 1332 aa12.47□□□□□ -0.41
LINC01949-201ENST00000445770 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
LINC01949-201ENST00000445770 NLRP6P59044 892 aa12.47□□□□□ -0.41
LINC01949-201ENST00000445770 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
LINC01949-201ENST00000445770 CDK12Q9NYV4 1490 aaPredicted RBP12.46□□□□□ -0.41
LINC01949-201ENST00000445770 AMPHP49418 695 aa12.46□□□□□ -0.41
LINC01949-201ENST00000445770 GNAI1P63096 354 aa12.46□□□□□ -0.41
LINC01949-201ENST00000445770 ANKRD45Q5TZF3 282 aa12.46□□□□□ -0.41
LINC01949-201ENST00000445770 SIRT2Q8IXJ6 389 aa12.46□□□□□ -0.41
LINC01949-201ENST00000445770 RIMS1Q86UR5 1692 aaKnown RBP12.46□□□□□ -0.42
LINC01949-201ENST00000445770 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.42
LINC01949-201ENST00000445770 TECPR2O15040 1411 aa12.45□□□□□ -0.42
LINC01949-201ENST00000445770 USP6P35125 1406 aa12.45□□□□□ -0.42
LINC01949-201ENST00000445770 CFAP44Q96MT7 982 aa12.45□□□□□ -0.42
LINC01949-201ENST00000445770 IFT57Q9NWB7 429 aa12.45□□□□□ -0.42
LINC01949-201ENST00000445770 PLEKHG1Q9ULL1 1385 aa12.45□□□□□ -0.42
LINC01949-201ENST00000445770 F6X3S4 739 aa12.45□□□□□ -0.42
LINC01949-201ENST00000445770 ZBTB7BO15156 539 aaPredicted RBP12.45□□□□□ -0.42
LINC01949-201ENST00000445770 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
LINC01949-201ENST00000445770 ZNF853P0CG23 659 aa12.45□□□□□ -0.42
LINC01949-201ENST00000445770 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
LINC01949-201ENST00000445770 ZNF428Q96B54 188 aa12.45□□□□□ -0.42
LINC01949-201ENST00000445770 DLG5Q8TDM6 1919 aa12.44□□□□□ -0.42
LINC01949-201ENST00000445770 RGPD8O14715 1765 aaPredicted RBP12.44□□□□□ -0.42
LINC01949-201ENST00000445770 CT47B1P0C2W7 299 aaPredicted RBP12.44□□□□□ -0.42
LINC01949-201ENST00000445770 SLC4A10Q6U841 1118 aa12.43□□□□□ -0.42
LINC01949-201ENST00000445770 EYA1Q99502 592 aa12.43□□□□□ -0.42
LINC01949-201ENST00000445770 AATKQ6ZMQ8 1374 aa12.43□□□□□ -0.42
LINC01949-201ENST00000445770 LMOD2Q6P5Q4 547 aa12.43□□□□□ -0.42
LINC01949-201ENST00000445770 G2E3Q7L622 706 aa12.43□□□□□ -0.42
LINC01949-201ENST00000445770 ABTB2Q8N961 1025 aa12.43□□□□□ -0.42
LINC01949-201ENST00000445770 C3P01024 1663 aa12.43□□□□□ -0.42
LINC01949-201ENST00000445770 PEAK1Q9H792 1746 aa12.43□□□□□ -0.42
LINC01949-201ENST00000445770 SETD1BQ9UPS6 1966 aaKnown RBP12.42□□□□□ -0.42
LINC01949-201ENST00000445770 C16orf71Q8IYS4 520 aaPredicted RBP12.42□□□□□ -0.42
LINC01949-201ENST00000445770 ARXQ96QS3 562 aa12.42□□□□□ -0.42
LINC01949-201ENST00000445770 MON2Q7Z3U7 1717 aa12.42□□□□□ -0.42
LINC01949-201ENST00000445770 OVOS2A0A0J9YW53 1432 aa12.42□□□□□ -0.42
LINC01949-201ENST00000445770 OVOS2Q6IE36 1432 aa12.42□□□□□ -0.42
LINC01949-201ENST00000445770 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
LINC01949-201ENST00000445770 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
LINC01949-201ENST00000445770 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
LINC01949-201ENST00000445770 ALDH1L2Q3SY69 923 aa12.42□□□□□ -0.42
LINC01949-201ENST00000445770 OTUD7AQ8TE49 926 aaPredicted RBP12.42□□□□□ -0.42
LINC01949-201ENST00000445770 SMARCA5O60264 1052 aaPredicted RBP12.41□□□□□ -0.42
LINC01949-201ENST00000445770 SMC5Q8IY18 1101 aa12.41□□□□□ -0.42
LINC01949-201ENST00000445770 CHD1LQ86WJ1 897 aa12.4□□□□□ -0.42
LINC01949-201ENST00000445770 THEMISQ8N1K5 641 aaPredicted RBP12.4□□□□□ -0.42
LINC01949-201ENST00000445770 TBC1D32Q96NH3 1257 aa12.4□□□□□ -0.42
LINC01949-201ENST00000445770 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
LINC01949-201ENST00000445770 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
LINC01949-201ENST00000445770 TSPYL4Q9UJ04 414 aa12.4□□□□□ -0.42
LINC01949-201ENST00000445770 MEIS3Q99687 375 aa12.39□□□□□ -0.43
LINC01949-201ENST00000445770 NUCB1Q02818 461 aa12.39□□□□□ -0.43
LINC01949-201ENST00000445770 NCBP3Q53F19 620 aaKnown RBP12.39□□□□□ -0.43
LINC01949-201ENST00000445770 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
LINC01949-201ENST00000445770 RTN4Q9NQC3 1192 aaKnown RBP12.39□□□□□ -0.43
LINC01949-201ENST00000445770 FOXD4L1Q9NU39 408 aa12.39□□□□□ -0.43
LINC01949-201ENST00000445770 CEP170BQ9Y4F5 1589 aaPredicted RBP12.39□□□□□ -0.43
LINC01949-201ENST00000445770 AKAP12Q02952 1782 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms