RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 PHACTR3Q96KR7 559 aa17.59■□□□□ 0.41
MCF2L-218ENST00000442625 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
MCF2L-218ENST00000442625 RAB3GAP1Q15042 981 aa17.59■□□□□ 0.41
MCF2L-218ENST00000442625 HDGFL2Q7Z4V5 671 aaPredicted RBP17.58■□□□□ 0.41
MCF2L-218ENST00000442625 TSPYL6Q8N831 410 aa17.58■□□□□ 0.41
MCF2L-218ENST00000442625 ATAD2Q6PL18 1390 aa17.58■□□□□ 0.4
MCF2L-218ENST00000442625 TBC1D9Q6ZT07 1266 aa17.58■□□□□ 0.4
MCF2L-218ENST00000442625 SNX21Q969T3 373 aa17.57■□□□□ 0.4
MCF2L-218ENST00000442625 TAOK2Q9UL54 1235 aa17.57■□□□□ 0.4
MCF2L-218ENST00000442625 GBP4Q96PP9 640 aa17.57■□□□□ 0.4
MCF2L-218ENST00000442625 PTPRMP28827 1452 aa17.57■□□□□ 0.4
MCF2L-218ENST00000442625 AK9Q5TCS8 1911 aa17.57■□□□□ 0.4
MCF2L-218ENST00000442625 FBXO31Q5XUX0 539 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-218ENST00000442625 NAP1L2Q9ULW6 460 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-218ENST00000442625 PIK3C2BO00750 1634 aa17.56■□□□□ 0.4
MCF2L-218ENST00000442625 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
MCF2L-218ENST00000442625 POLKQ9UBT6 870 aa17.55■□□□□ 0.4
MCF2L-218ENST00000442625 FCHSD2O94868 740 aa17.55■□□□□ 0.4
MCF2L-218ENST00000442625 WAPLQ7Z5K2 1190 aa17.55■□□□□ 0.4
MCF2L-218ENST00000442625 SIRT2Q8IXJ6 389 aa17.55■□□□□ 0.4
MCF2L-218ENST00000442625 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
MCF2L-218ENST00000442625 ZBTB7BO15156 539 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-218ENST00000442625 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
MCF2L-218ENST00000442625 LRRC7Q96NW7 1537 aa17.54■□□□□ 0.4
MCF2L-218ENST00000442625 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
MCF2L-218ENST00000442625 K7ELQ4 463 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-218ENST00000442625 CHAMP1Q96JM3 812 aa17.54■□□□□ 0.4
MCF2L-218ENST00000442625 SLC52A1Q9NWF4 448 aa17.54■□□□□ 0.4
MCF2L-218ENST00000442625 NCLP19338 710 aaKnown RBP17.53■□□□□ 0.4
MCF2L-218ENST00000442625 BMP2KLQ5H9B9 411 aa17.53■□□□□ 0.4
MCF2L-218ENST00000442625 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
MCF2L-218ENST00000442625 VAMP4O75379 141 aa17.53■□□□□ 0.4
MCF2L-218ENST00000442625 PKP1Q13835 747 aa17.52■□□□□ 0.4
MCF2L-218ENST00000442625 DDX49Q9Y6V7 483 aaKnown RBP17.52■□□□□ 0.4
MCF2L-218ENST00000442625 MRPL50Q8N5N7 158 aaKnown RBP17.52■□□□□ 0.39
MCF2L-218ENST00000442625 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
MCF2L-218ENST00000442625 STAG3Q9UJ98 1225 aa17.51■□□□□ 0.39
MCF2L-218ENST00000442625 C16orf71Q8IYS4 520 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-218ENST00000442625 YEATS2Q9ULM3 1422 aa17.51■□□□□ 0.39
MCF2L-218ENST00000442625 NASPP49321 788 aaPredicted RBP17.5■□□□□ 0.39
MCF2L-218ENST00000442625 MBIPQ9NS73 344 aa17.5■□□□□ 0.39
MCF2L-218ENST00000442625 MYO5BQ9ULV0 1848 aa17.5■□□□□ 0.39
MCF2L-218ENST00000442625 APBB1O00213 710 aa17.5■□□□□ 0.39
MCF2L-218ENST00000442625 NFE2L2Q16236 605 aa17.5■□□□□ 0.39
MCF2L-218ENST00000442625 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
MCF2L-218ENST00000442625 MCTP1Q6DN14 999 aa17.49■□□□□ 0.39
MCF2L-218ENST00000442625 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-218ENST00000442625 ZFYVE9O95405 1425 aa17.49■□□□□ 0.39
MCF2L-218ENST00000442625 FAM83GA6ND36 823 aa17.49■□□□□ 0.39
MCF2L-218ENST00000442625 BAG4O95429 457 aaKnown RBP17.49■□□□□ 0.39
MCF2L-218ENST00000442625 GSPT1P15170 499 aaKnown RBP17.49■□□□□ 0.39
MCF2L-218ENST00000442625 MED14O60244 1454 aa17.49■□□□□ 0.39
MCF2L-218ENST00000442625 DIP2CQ9Y2E4 1556 aa17.48■□□□□ 0.39
MCF2L-218ENST00000442625 DCTN1Q14203 1278 aa17.48■□□□□ 0.39
MCF2L-218ENST00000442625 CFAP74Q9C0B2 1584 aa17.48■□□□□ 0.39
MCF2L-218ENST00000442625 RRP9O43818 475 aaKnown RBP17.48■□□□□ 0.39
MCF2L-218ENST00000442625 NME9Q86XW9 330 aa17.48■□□□□ 0.39
MCF2L-218ENST00000442625 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
MCF2L-218ENST00000442625 CAVIN1Q6NZI2 390 aaKnown RBP17.47■□□□□ 0.39
MCF2L-218ENST00000442625 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
MCF2L-218ENST00000442625 OTUD7AQ8TE49 926 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-218ENST00000442625 CNKSR2Q8WXI2 1034 aa17.47■□□□□ 0.39
MCF2L-218ENST00000442625 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
MCF2L-218ENST00000442625 SKOR2Q2VWA4 1001 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-218ENST00000442625 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
MCF2L-218ENST00000442625 GCC1Q96CN9 775 aa17.47■□□□□ 0.39
MCF2L-218ENST00000442625 ARHGEF40Q8TER5 1519 aa17.46■□□□□ 0.39
MCF2L-218ENST00000442625 FOXD4L5Q5VV16 416 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-218ENST00000442625 FOXD4L4Q8WXT5 416 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-218ENST00000442625 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.39
MCF2L-218ENST00000442625 RRS1Q15050 365 aaKnown RBP17.46■□□□□ 0.39
MCF2L-218ENST00000442625 RBM27Q9P2N5 1060 aaKnown RBP17.45■□□□□ 0.38
MCF2L-218ENST00000442625 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
MCF2L-218ENST00000442625 ANKRD26Q9UPS8 1709 aa17.45■□□□□ 0.38
MCF2L-218ENST00000442625 GNAI1P63096 354 aa17.45■□□□□ 0.38
MCF2L-218ENST00000442625 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-218ENST00000442625 TMEM131LA2VDJ0 1609 aa17.44■□□□□ 0.38
MCF2L-218ENST00000442625 IL13P35225 146 aa17.44■□□□□ 0.38
MCF2L-218ENST00000442625 ZGPATQ8N5A5 531 aaKnown RBP17.43■□□□□ 0.38
MCF2L-218ENST00000442625 IFT57Q9NWB7 429 aa17.43■□□□□ 0.38
MCF2L-218ENST00000442625 CDC45O75419 566 aa17.43■□□□□ 0.38
MCF2L-218ENST00000442625 ZNF428Q96B54 188 aa17.43■□□□□ 0.38
MCF2L-218ENST00000442625 ABCC4O15439 1325 aa17.43■□□□□ 0.38
MCF2L-218ENST00000442625 ALKQ9UM73 1620 aa17.43■□□□□ 0.38
MCF2L-218ENST00000442625 GOLGA6L22H0YM25 854 aa17.42■□□□□ 0.38
MCF2L-218ENST00000442625 SMARCA5O60264 1052 aaPredicted RBP17.42■□□□□ 0.38
MCF2L-218ENST00000442625 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
MCF2L-218ENST00000442625 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
MCF2L-218ENST00000442625 CCDC173Q0VFZ6 552 aa17.42■□□□□ 0.38
MCF2L-218ENST00000442625 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
MCF2L-218ENST00000442625 KLHL40Q2TBA0 621 aa17.42■□□□□ 0.38
MCF2L-218ENST00000442625 PLEKHM2Q8IWE5 1019 aa17.42■□□□□ 0.38
MCF2L-218ENST00000442625 CHMP4BQ9H444 224 aaKnown RBP17.42■□□□□ 0.38
MCF2L-218ENST00000442625 RBSNQ9H1K0 784 aa17.41■□□□□ 0.38
MCF2L-218ENST00000442625 ZBTB7CA1YPR0 619 aa17.41■□□□□ 0.38
MCF2L-218ENST00000442625 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
MCF2L-218ENST00000442625 OSCARQ8IYS5 282 aa17.41■□□□□ 0.38
MCF2L-218ENST00000442625 CLTCQ00610 1675 aaKnown RBP17.41■□□□□ 0.38
MCF2L-218ENST00000442625 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
MCF2L-218ENST00000442625 PPP1R9BQ96SB3 815 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms