RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 GSPT1P15170 499 aaKnown RBP11.13□□□□□ -0.63
LDB2-202ENST00000441778 ZSCAN30Q86W11 494 aa11.13□□□□□ -0.63
LDB2-202ENST00000441778 MRPL50Q8N5N7 158 aaKnown RBP11.13□□□□□ -0.63
LDB2-202ENST00000441778 FAM135BQ49AJ0 1406 aa11.13□□□□□ -0.63
LDB2-202ENST00000441778 GOLGA6L22H0YM25 854 aa11.13□□□□□ -0.63
LDB2-202ENST00000441778 CDC45O75419 566 aa11.12□□□□□ -0.63
LDB2-202ENST00000441778 SRPK2P78362 688 aaKnown RBP11.12□□□□□ -0.63
LDB2-202ENST00000441778 TSPYL6Q8N831 410 aa11.12□□□□□ -0.63
LDB2-202ENST00000441778 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
LDB2-202ENST00000441778 VAMP4O75379 141 aa11.12□□□□□ -0.63
LDB2-202ENST00000441778 THUMPD2Q9BTF0 503 aaKnown RBP11.12□□□□□ -0.63
LDB2-202ENST00000441778 ABCC4O15439 1325 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 DLG5Q8TDM6 1919 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 GGT6Q6P531 493 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 PTPRMP28827 1452 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 OFD1O75665 1012 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 PRKAR2BP31323 418 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 ZNF445P59923 1031 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 PKP1Q13835 747 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 MCTP1Q6DN14 999 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 SENP3Q9H4L4 574 aaPredicted RBP11.11□□□□□ -0.63
LDB2-202ENST00000441778 STK26Q9P289 416 aa11.11□□□□□ -0.63
LDB2-202ENST00000441778 CYP2E1P05181 493 aaPredicted RBP11.1□□□□□ -0.63
LDB2-202ENST00000441778 ARHGAP45Q92619 1136 aa11.1□□□□□ -0.63
LDB2-202ENST00000441778 MAP2P11137 1827 aaKnown RBP11.1□□□□□ -0.63
LDB2-202ENST00000441778 ZFYVE9O95405 1425 aa11.1□□□□□ -0.63
LDB2-202ENST00000441778 FCHSD2O94868 740 aa11.1□□□□□ -0.63
LDB2-202ENST00000441778 ZSCAN23Q3MJ62 389 aa11.1□□□□□ -0.63
LDB2-202ENST00000441778 CAVIN1Q6NZI2 390 aaKnown RBP11.1□□□□□ -0.63
LDB2-202ENST00000441778 PLEKHM2Q8IWE5 1019 aa11.1□□□□□ -0.63
LDB2-202ENST00000441778 LMBRD1Q9NUN5 540 aa11.1□□□□□ -0.63
LDB2-202ENST00000441778 ATAD2Q6PL18 1390 aa11.09□□□□□ -0.63
LDB2-202ENST00000441778 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
LDB2-202ENST00000441778 RABEP1Q15276 862 aa11.09□□□□□ -0.63
LDB2-202ENST00000441778 PHACTR3Q96KR7 559 aa11.09□□□□□ -0.63
LDB2-202ENST00000441778 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
LDB2-202ENST00000441778 ELL2O00472 640 aaPredicted RBP11.09□□□□□ -0.63
LDB2-202ENST00000441778 FBLN1P23142 703 aa11.09□□□□□ -0.63
LDB2-202ENST00000441778 MSNP26038 577 aaKnown RBP11.09□□□□□ -0.63
LDB2-202ENST00000441778 ANP32BQ92688 251 aaKnown RBP11.09□□□□□ -0.63
LDB2-202ENST00000441778 RBSNQ9H1K0 784 aa11.09□□□□□ -0.63
LDB2-202ENST00000441778 CHMP4BQ9H444 224 aaKnown RBP11.09□□□□□ -0.63
LDB2-202ENST00000441778 TERF2IPQ9NYB0 399 aa11.09□□□□□ -0.63
LDB2-202ENST00000441778 PDCL3Q9H2J4 239 aa11.08□□□□□ -0.64
LDB2-202ENST00000441778 NCLP19338 710 aaKnown RBP11.08□□□□□ -0.64
LDB2-202ENST00000441778 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
LDB2-202ENST00000441778 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.08□□□□□ -0.64
LDB2-202ENST00000441778 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
LDB2-202ENST00000441778 ASXL2Q76L83 1435 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 NUCB2P80303 420 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 TTC22Q5TAA0 569 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 USP26Q9BXU7 913 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 MBIPQ9NS73 344 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 POGZQ7Z3K3 1410 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 YEATS2Q9ULM3 1422 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 HMOX1P09601 288 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 CALD1Q05682 793 aaKnown RBP11.07□□□□□ -0.64
LDB2-202ENST00000441778 C16orf71Q8IYS4 520 aaPredicted RBP11.07□□□□□ -0.64
LDB2-202ENST00000441778 PDLIM2Q96JY6 352 aa11.07□□□□□ -0.64
LDB2-202ENST00000441778 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
LDB2-202ENST00000441778 ZNF853P0CG23 659 aa11.06□□□□□ -0.64
LDB2-202ENST00000441778 PRIM1P49642 420 aaKnown RBP11.06□□□□□ -0.64
LDB2-202ENST00000441778 ZGPATQ8N5A5 531 aaKnown RBP11.06□□□□□ -0.64
LDB2-202ENST00000441778 GPT2Q8TD30 523 aa11.06□□□□□ -0.64
LDB2-202ENST00000441778 OTUD7AQ8TE49 926 aaPredicted RBP11.06□□□□□ -0.64
LDB2-202ENST00000441778 PRAM1Q96QH2 718 aa11.06□□□□□ -0.64
LDB2-202ENST00000441778 IFT57Q9NWB7 429 aa11.06□□□□□ -0.64
LDB2-202ENST00000441778 POLKQ9UBT6 870 aa11.06□□□□□ -0.64
LDB2-202ENST00000441778 ZDHHC9Q9Y397 364 aa11.06□□□□□ -0.64
LDB2-202ENST00000441778 YTHDC2Q9H6S0 1430 aaKnown RBP11.05□□□□□ -0.64
LDB2-202ENST00000441778 MLH3Q9UHC1 1453 aa11.05□□□□□ -0.64
LDB2-202ENST00000441778 GNAI1P63096 354 aa11.05□□□□□ -0.64
LDB2-202ENST00000441778 TWISTNBQ3B726 338 aaPredicted RBP11.05□□□□□ -0.64
LDB2-202ENST00000441778 HS1BP3Q53T59 392 aa11.05□□□□□ -0.64
LDB2-202ENST00000441778 C8orf58Q8NAV2 365 aa11.05□□□□□ -0.64
LDB2-202ENST00000441778 CHAMP1Q96JM3 812 aa11.05□□□□□ -0.64
LDB2-202ENST00000441778 DCTPP1Q9H773 170 aa11.05□□□□□ -0.64
LDB2-202ENST00000441778 NOL7Q9UMY1 257 aaKnown RBP11.05□□□□□ -0.64
LDB2-202ENST00000441778 ATP10DQ9P241 1426 aa11.05□□□□□ -0.64
LDB2-202ENST00000441778 TERF1P54274 439 aa11.04□□□□□ -0.64
LDB2-202ENST00000441778 RBM10P98175 930 aaKnown RBP11.04□□□□□ -0.64
LDB2-202ENST00000441778 HDGFL2Q7Z4V5 671 aaPredicted RBP11.04□□□□□ -0.64
LDB2-202ENST00000441778 R3HCC1Q9Y3T6 440 aaKnown RBP11.04□□□□□ -0.64
LDB2-202ENST00000441778 ZNF500O60304 480 aaPredicted RBP11.04□□□□□ -0.64
LDB2-202ENST00000441778 PRPF40AO75400 957 aaKnown RBP11.04□□□□□ -0.64
LDB2-202ENST00000441778 ARHGEF40Q8TER5 1519 aa11.04□□□□□ -0.64
LDB2-202ENST00000441778 XPCQ01831 940 aaPredicted RBP11.03□□□□□ -0.64
LDB2-202ENST00000441778 INTS3Q68E01 1043 aaKnown RBP11.03□□□□□ -0.64
LDB2-202ENST00000441778 API5Q9BZZ5 524 aaKnown RBP11.03□□□□□ -0.64
LDB2-202ENST00000441778 CABP1Q9NZU7 370 aa11.03□□□□□ -0.64
LDB2-202ENST00000441778 SDSP20132 328 aa11.03□□□□□ -0.64
LDB2-202ENST00000441778 IDI1Q13907 227 aa11.03□□□□□ -0.64
LDB2-202ENST00000441778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.03□□□□□ -0.64
LDB2-202ENST00000441778 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
LDB2-202ENST00000441778 TMEM131LA2VDJ0 1609 aa11.03□□□□□ -0.64
LDB2-202ENST00000441778 KIF24Q5T7B8 1368 aa11.03□□□□□ -0.64
LDB2-202ENST00000441778 CDK19Q9BWU1 502 aa11.02□□□□□ -0.64
LDB2-202ENST00000441778 CWC22Q9HCG8 908 aaKnown RBP11.02□□□□□ -0.64
LDB2-202ENST00000441778 TMEM63CQ9P1W3 806 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms