RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
TSC2-206ENST00000439117 NSD3Q9BZ95 1437 aa17.89■□□□□ 0.45
TSC2-206ENST00000439117 GNAI3P08754 354 aa17.89■□□□□ 0.45
TSC2-206ENST00000439117 PDCP20941 246 aa17.89■□□□□ 0.45
TSC2-206ENST00000439117 RRS1Q15050 365 aaKnown RBP17.88■□□□□ 0.45
TSC2-206ENST00000439117 CCDC192P0DO97 292 aa17.88■□□□□ 0.45
TSC2-206ENST00000439117 ZNF530Q6P9A1 599 aaPredicted RBP17.88■□□□□ 0.45
TSC2-206ENST00000439117 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
TSC2-206ENST00000439117 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
TSC2-206ENST00000439117 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
TSC2-206ENST00000439117 PRDM11Q9NQV5 511 aa17.87■□□□□ 0.45
TSC2-206ENST00000439117 EIF3JO75822 258 aaKnown RBP17.87■□□□□ 0.45
TSC2-206ENST00000439117 TOM1L2Q6ZVM7 507 aa17.87■□□□□ 0.45
TSC2-206ENST00000439117 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
TSC2-206ENST00000439117 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
TSC2-206ENST00000439117 K7ELQ4 463 aaPredicted RBP17.86■□□□□ 0.45
TSC2-206ENST00000439117 VPS37DQ86XT2 251 aa17.86■□□□□ 0.45
TSC2-206ENST00000439117 PLCH2O75038 1416 aa17.86■□□□□ 0.45
TSC2-206ENST00000439117 ERC2O15083 957 aa17.86■□□□□ 0.45
TSC2-206ENST00000439117 CEBPAP49715 358 aaPredicted RBP17.86■□□□□ 0.45
TSC2-206ENST00000439117 MARCH6O60337 910 aa17.86■□□□□ 0.45
TSC2-206ENST00000439117 FCHSD2O94868 740 aa17.85■□□□□ 0.45
TSC2-206ENST00000439117 NEK4P51957 841 aa17.85■□□□□ 0.45
TSC2-206ENST00000439117 KINO60870 393 aaKnown RBP17.85■□□□□ 0.45
TSC2-206ENST00000439117 ERLIN1O75477 346 aa17.85■□□□□ 0.45
TSC2-206ENST00000439117 NOL10Q9BSC4 688 aaKnown RBP17.85■□□□□ 0.45
TSC2-206ENST00000439117 KIAA0754O94854 1291 aa17.85■□□□□ 0.45
TSC2-206ENST00000439117 NUP153P49790 1475 aaKnown RBP17.84■□□□□ 0.45
TSC2-206ENST00000439117 ASXL2Q76L83 1435 aa17.84■□□□□ 0.45
TSC2-206ENST00000439117 HDGFL1Q5TGJ6 251 aa17.84■□□□□ 0.45
TSC2-206ENST00000439117 CALCOCO1Q9P1Z2 691 aa17.84■□□□□ 0.45
TSC2-206ENST00000439117 AXDND1Q5T1B0 1012 aaPredicted RBP17.84■□□□□ 0.45
TSC2-206ENST00000439117 SPC24Q8NBT2 197 aa17.84■□□□□ 0.45
TSC2-206ENST00000439117 CT47B1P0C2W7 299 aaPredicted RBP17.84■□□□□ 0.45
TSC2-206ENST00000439117 XPCQ01831 940 aaPredicted RBP17.83■□□□□ 0.45
TSC2-206ENST00000439117 SPG7Q9UQ90 795 aa17.83■□□□□ 0.45
TSC2-206ENST00000439117 NINLQ9Y2I6 1382 aa17.83■□□□□ 0.45
TSC2-206ENST00000439117 PDILTQ8N807 584 aa17.83■□□□□ 0.45
TSC2-206ENST00000439117 RPRD2Q5VT52 1461 aaKnown RBP17.83■□□□□ 0.45
TSC2-206ENST00000439117 HSP90AB3PQ58FF7 597 aa17.83■□□□□ 0.44
TSC2-206ENST00000439117 CAGE1Q8TC20 777 aa17.83■□□□□ 0.44
TSC2-206ENST00000439117 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
TSC2-206ENST00000439117 FBXW7Q969H0 707 aa17.82■□□□□ 0.44
TSC2-206ENST00000439117 AMOTL2Q9Y2J4 779 aa17.82■□□□□ 0.44
TSC2-206ENST00000439117 FAM135AQ9P2D6 1515 aa17.82■□□□□ 0.44
TSC2-206ENST00000439117 CCDC184Q52MB2 194 aa17.82■□□□□ 0.44
TSC2-206ENST00000439117 SLC4A2P04920 1241 aa17.82■□□□□ 0.44
TSC2-206ENST00000439117 KCNH5Q8NCM2 988 aa17.82■□□□□ 0.44
TSC2-206ENST00000439117 NEUROD6Q96NK8 337 aa17.82■□□□□ 0.44
TSC2-206ENST00000439117 WDR33Q9C0J8 1336 aaKnown RBP17.82■□□□□ 0.44
TSC2-206ENST00000439117 PSMA5P28066 241 aa17.81■□□□□ 0.44
TSC2-206ENST00000439117 AMOTL1Q8IY63 956 aa17.81■□□□□ 0.44
TSC2-206ENST00000439117 SMC2O95347 1197 aa17.81■□□□□ 0.44
TSC2-206ENST00000439117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.81■□□□□ 0.44
TSC2-206ENST00000439117 CABP4P57796 275 aa17.81■□□□□ 0.44
TSC2-206ENST00000439117 GCC1Q96CN9 775 aa17.81■□□□□ 0.44
TSC2-206ENST00000439117 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
TSC2-206ENST00000439117 NOS1P29475 1434 aa17.81■□□□□ 0.44
TSC2-206ENST00000439117 FIBPO43427 364 aa17.8■□□□□ 0.44
TSC2-206ENST00000439117 C11orf95C9JLR9 678 aaPredicted RBP17.8■□□□□ 0.44
TSC2-206ENST00000439117 DDX54Q8TDD1 881 aaKnown RBP17.8■□□□□ 0.44
TSC2-206ENST00000439117 C14orf93Q9H972 538 aaKnown RBP17.8■□□□□ 0.44
TSC2-206ENST00000439117 SURF6O75683 361 aaKnown RBP17.8■□□□□ 0.44
TSC2-206ENST00000439117 CLASRPQ8N2M8 674 aaKnown RBP17.8■□□□□ 0.44
TSC2-206ENST00000439117 NOB1Q9ULX3 412 aaKnown RBP17.79■□□□□ 0.44
TSC2-206ENST00000439117 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
TSC2-206ENST00000439117 KIF2AO00139 706 aaPredicted RBP17.79■□□□□ 0.44
TSC2-206ENST00000439117 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
TSC2-206ENST00000439117 ZC3H6P61129 1189 aaKnown RBP17.79■□□□□ 0.44
TSC2-206ENST00000439117 TRDNQ13061 729 aa17.79■□□□□ 0.44
TSC2-206ENST00000439117 SAFBQ15424 915 aaKnown RBP eCLIP17.79■□□□□ 0.44
TSC2-206ENST00000439117 UGGT2Q9NYU1 1516 aa17.79■□□□□ 0.44
TSC2-206ENST00000439117 BCAR3O75815 825 aa17.79■□□□□ 0.44
TSC2-206ENST00000439117 SMARCE1Q969G3 411 aa17.79■□□□□ 0.44
TSC2-206ENST00000439117 ERICH4A6NGS2 130 aa17.78■□□□□ 0.44
TSC2-206ENST00000439117 NUTM2BA6NNL0 878 aaPredicted RBP17.78■□□□□ 0.44
TSC2-206ENST00000439117 NUTM2EB1AL46 878 aaPredicted RBP17.78■□□□□ 0.44
TSC2-206ENST00000439117 NUTM2AQ8IVF1 878 aaPredicted RBP17.78■□□□□ 0.44
TSC2-206ENST00000439117 MCM5P33992 734 aa17.78■□□□□ 0.44
TSC2-206ENST00000439117 NAP1L1P55209 391 aaKnown RBP17.78■□□□□ 0.44
TSC2-206ENST00000439117 CBX1P83916 185 aa17.78■□□□□ 0.44
TSC2-206ENST00000439117 NFE2L2Q16236 605 aa17.78■□□□□ 0.44
TSC2-206ENST00000439117 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
TSC2-206ENST00000439117 ADAMTS12P58397 1594 aa17.78■□□□□ 0.44
TSC2-206ENST00000439117 RBM33Q96EV2 1170 aaKnown RBP17.77■□□□□ 0.44
TSC2-206ENST00000439117 MYO6Q9UM54 1294 aa17.77■□□□□ 0.44
TSC2-206ENST00000439117 CCDC27Q2M243 656 aa17.77■□□□□ 0.44
TSC2-206ENST00000439117 PRDM10Q9NQV6 1147 aa17.77■□□□□ 0.44
TSC2-206ENST00000439117 GNAI2P04899 355 aa17.77■□□□□ 0.43
TSC2-206ENST00000439117 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.43
TSC2-206ENST00000439117 PHF8Q9UPP1 1060 aa17.76■□□□□ 0.43
TSC2-206ENST00000439117 GOLGA6L7A0A1B0GV03 622 aa17.76■□□□□ 0.43
TSC2-206ENST00000439117 TMPOP42166 694 aaKnown RBP17.76■□□□□ 0.43
TSC2-206ENST00000439117 CLCN1P35523 988 aa17.76■□□□□ 0.43
TSC2-206ENST00000439117 FILIP1LQ4L180 1135 aa17.76■□□□□ 0.43
TSC2-206ENST00000439117 UBXN4Q92575 508 aa17.76■□□□□ 0.43
TSC2-206ENST00000439117 DYNC1I1O14576 645 aa17.76■□□□□ 0.43
TSC2-206ENST00000439117 CCT4P50991 539 aaKnown RBP17.75■□□□□ 0.43
TSC2-206ENST00000439117 AEBP1Q8IUX7 1158 aa17.75■□□□□ 0.43
TSC2-206ENST00000439117 WDR7Q9Y4E6 1490 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms