RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 BCAR3O75815 825 aa19.49■□□□□ 0.71
LINC00163-202ENST00000439088 AMPHP49418 695 aa19.48■□□□□ 0.71
LINC00163-202ENST00000439088 NUTM2GQ5VZR2 741 aa19.48■□□□□ 0.71
LINC00163-202ENST00000439088 ORAI2Q96SN7 254 aa19.48■□□□□ 0.71
LINC00163-202ENST00000439088 MARF1Q9Y4F3 1742 aaKnown RBP19.48■□□□□ 0.71
LINC00163-202ENST00000439088 CT47B1P0C2W7 299 aaPredicted RBP19.48■□□□□ 0.71
LINC00163-202ENST00000439088 CRBNQ96SW2 442 aa19.48■□□□□ 0.71
LINC00163-202ENST00000439088 C20orf194Q5TEA3 1177 aa19.47■□□□□ 0.71
LINC00163-202ENST00000439088 SULT6B1Q6IMI4 303 aa19.47■□□□□ 0.71
LINC00163-202ENST00000439088 FANCIQ9NVI1 1328 aa19.46■□□□□ 0.71
LINC00163-202ENST00000439088 RARSP54136 660 aaKnown RBP19.46■□□□□ 0.71
LINC00163-202ENST00000439088 CALD1Q05682 793 aaKnown RBP19.46■□□□□ 0.71
LINC00163-202ENST00000439088 TMEM94Q12767 1356 aa19.46■□□□□ 0.71
LINC00163-202ENST00000439088 RGPD1P0DJD0 1748 aa19.45■□□□□ 0.7
LINC00163-202ENST00000439088 C1orf167Q5SNV9 1468 aa19.45■□□□□ 0.7
LINC00163-202ENST00000439088 LMTK3Q96Q04 1460 aa19.45■□□□□ 0.7
LINC00163-202ENST00000439088 STRCP1A6NGW2 1772 aa19.45■□□□□ 0.7
LINC00163-202ENST00000439088 LMOD3Q0VAK6 560 aa19.45■□□□□ 0.7
LINC00163-202ENST00000439088 FOXO3O43524 673 aa19.44■□□□□ 0.7
LINC00163-202ENST00000439088 ATF3P18847 181 aa19.44■□□□□ 0.7
LINC00163-202ENST00000439088 AEBP1Q8IUX7 1158 aa19.44■□□□□ 0.7
LINC00163-202ENST00000439088 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
LINC00163-202ENST00000439088 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
LINC00163-202ENST00000439088 DCCP43146 1447 aa19.43■□□□□ 0.7
LINC00163-202ENST00000439088 HOXC9P31274 260 aa19.42■□□□□ 0.7
LINC00163-202ENST00000439088 PDE3AQ14432 1141 aa19.42■□□□□ 0.7
LINC00163-202ENST00000439088 TSHZ2Q9NRE2 1034 aa19.42■□□□□ 0.7
LINC00163-202ENST00000439088 EXOSC9Q06265 439 aaKnown RBP19.42■□□□□ 0.7
LINC00163-202ENST00000439088 KCNH5Q8NCM2 988 aa19.42■□□□□ 0.7
LINC00163-202ENST00000439088 KIF1AQ12756 1690 aa19.41■□□□□ 0.7
LINC00163-202ENST00000439088 RTL1A6NKG5 1358 aa19.4■□□□□ 0.7
LINC00163-202ENST00000439088 KRT28Q7Z3Y7 464 aa19.4■□□□□ 0.7
LINC00163-202ENST00000439088 IGSF1Q8N6C5 1336 aa19.39■□□□□ 0.7
LINC00163-202ENST00000439088 EYA1Q99502 592 aa19.39■□□□□ 0.69
LINC00163-202ENST00000439088 MST1RQ04912 1400 aa19.39■□□□□ 0.69
LINC00163-202ENST00000439088 KDRP35968 1356 aa19.39■□□□□ 0.69
LINC00163-202ENST00000439088 CADPS2Q86UW7 1296 aa19.39■□□□□ 0.69
LINC00163-202ENST00000439088 IFT57Q9NWB7 429 aa19.39■□□□□ 0.69
LINC00163-202ENST00000439088 STRCQ7RTU9 1775 aa19.39■□□□□ 0.69
LINC00163-202ENST00000439088 DLG5Q8TDM6 1919 aa19.38■□□□□ 0.69
LINC00163-202ENST00000439088 GNAI1P63096 354 aa19.38■□□□□ 0.69
LINC00163-202ENST00000439088 ZNF853P0CG23 659 aa19.37■□□□□ 0.69
LINC00163-202ENST00000439088 IP6K1Q92551 441 aa19.37■□□□□ 0.69
LINC00163-202ENST00000439088 NFAT5O94916 1531 aa19.37■□□□□ 0.69
LINC00163-202ENST00000439088 CANXP27824 592 aaKnown RBP19.37■□□□□ 0.69
LINC00163-202ENST00000439088 XPCQ01831 940 aaPredicted RBP19.37■□□□□ 0.69
LINC00163-202ENST00000439088 THUMPD2Q9BTF0 503 aaKnown RBP19.36■□□□□ 0.69
LINC00163-202ENST00000439088 TRPM3Q9HCF6 1732 aaPredicted RBP19.36■□□□□ 0.69
LINC00163-202ENST00000439088 MSH6P52701 1360 aa19.35■□□□□ 0.69
LINC00163-202ENST00000439088 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
LINC00163-202ENST00000439088 CFAP44Q96MT7 982 aa19.35■□□□□ 0.69
LINC00163-202ENST00000439088 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
LINC00163-202ENST00000439088 LTN1O94822 1766 aa19.34■□□□□ 0.69
LINC00163-202ENST00000439088 GCP02774 474 aa19.34■□□□□ 0.69
LINC00163-202ENST00000439088 ZNF428Q96B54 188 aa19.34■□□□□ 0.69
LINC00163-202ENST00000439088 SLIT3O75094 1523 aa19.33■□□□□ 0.69
LINC00163-202ENST00000439088 FAM83GA6ND36 823 aa19.33■□□□□ 0.69
LINC00163-202ENST00000439088 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.68
LINC00163-202ENST00000439088 USP19O94966 1318 aa19.32■□□□□ 0.68
LINC00163-202ENST00000439088 LMOD2Q6P5Q4 547 aa19.32■□□□□ 0.68
LINC00163-202ENST00000439088 PHRF1Q9P1Y6 1649 aaKnown RBP19.32■□□□□ 0.68
LINC00163-202ENST00000439088 SSH1Q8WYL5 1049 aa19.31■□□□□ 0.68
LINC00163-202ENST00000439088 MBIPQ9NS73 344 aa19.31■□□□□ 0.68
LINC00163-202ENST00000439088 DCTN1Q14203 1278 aa19.31■□□□□ 0.68
LINC00163-202ENST00000439088 MTHFSDQ2M296 383 aaKnown RBP19.31■□□□□ 0.68
LINC00163-202ENST00000439088 ALDH1L2Q3SY69 923 aa19.31■□□□□ 0.68
LINC00163-202ENST00000439088 ARHGEF25Q86VW2 580 aa19.31■□□□□ 0.68
LINC00163-202ENST00000439088 PANK1Q8TE04 598 aa19.31■□□□□ 0.68
LINC00163-202ENST00000439088 SMC4Q9NTJ3 1288 aa19.31■□□□□ 0.68
LINC00163-202ENST00000439088 ZKSCAN2Q63HK3 967 aa19.3■□□□□ 0.68
LINC00163-202ENST00000439088 GAS2L2Q8NHY3 880 aa19.3■□□□□ 0.68
LINC00163-202ENST00000439088 LTV1Q96GA3 475 aaPredicted RBP19.3■□□□□ 0.68
LINC00163-202ENST00000439088 MS4A1P11836 297 aa19.3■□□□□ 0.68
LINC00163-202ENST00000439088 XIRP1Q702N8 1843 aaKnown RBP19.29■□□□□ 0.68
LINC00163-202ENST00000439088 AAMPQ13685 434 aa19.29■□□□□ 0.68
LINC00163-202ENST00000439088 NPHP3Q7Z494 1330 aa19.29■□□□□ 0.68
LINC00163-202ENST00000439088 HTATSF1O43719 755 aaKnown RBP19.28■□□□□ 0.68
LINC00163-202ENST00000439088 VAMP4O75379 141 aa19.28■□□□□ 0.68
LINC00163-202ENST00000439088 BRPF1P55201 1214 aaPredicted RBP19.28■□□□□ 0.68
LINC00163-202ENST00000439088 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
LINC00163-202ENST00000439088 ALS2Q96Q42 1657 aa19.27■□□□□ 0.68
LINC00163-202ENST00000439088 ZNF335Q9H4Z2 1342 aaPredicted RBP19.27■□□□□ 0.67
LINC00163-202ENST00000439088 CHL1O00533 1208 aa19.27■□□□□ 0.67
LINC00163-202ENST00000439088 MCM10Q7L590 875 aa19.27■□□□□ 0.67
LINC00163-202ENST00000439088 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.67
LINC00163-202ENST00000439088 KDM2BQ8NHM5 1336 aa19.25■□□□□ 0.67
LINC00163-202ENST00000439088 ZBTB7CA1YPR0 619 aa19.25■□□□□ 0.67
LINC00163-202ENST00000439088 RLBP1P12271 317 aa19.25■□□□□ 0.67
LINC00163-202ENST00000439088 IPO8O15397 1037 aaKnown RBP19.25■□□□□ 0.67
LINC00163-202ENST00000439088 CENPQQ7L2Z9 268 aaPredicted RBP19.25■□□□□ 0.67
LINC00163-202ENST00000439088 DZIP1LQ8IYY4 767 aaKnown RBP19.25■□□□□ 0.67
LINC00163-202ENST00000439088 KIF16BQ96L93 1317 aa19.24■□□□□ 0.67
LINC00163-202ENST00000439088 NBPF6Q5VWK0 638 aa19.24■□□□□ 0.67
LINC00163-202ENST00000439088 TSPYL6Q8N831 410 aa19.24■□□□□ 0.67
LINC00163-202ENST00000439088 DDX17Q92841 729 aaKnown RBP19.24■□□□□ 0.67
LINC00163-202ENST00000439088 NBPF4Q96M43 638 aa19.24■□□□□ 0.67
LINC00163-202ENST00000439088 NOB1Q9ULX3 412 aaKnown RBP19.24■□□□□ 0.67
LINC00163-202ENST00000439088 TNNQ9UQP3 1299 aa19.24■□□□□ 0.67
LINC00163-202ENST00000439088 CRB1P82279 1406 aa19.24■□□□□ 0.67
LINC00163-202ENST00000439088 TWISTNBQ3B726 338 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms