RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 IL13P35225 146 aa17.9■□□□□ 0.46
PTCHD3-201ENST00000438700 PHF8Q9UPP1 1060 aa17.9■□□□□ 0.46
PTCHD3-201ENST00000438700 SOX12O15370 315 aa17.89■□□□□ 0.45
PTCHD3-201ENST00000438700 CCDC27Q2M243 656 aa17.89■□□□□ 0.45
PTCHD3-201ENST00000438700 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
PTCHD3-201ENST00000438700 PANK1Q8TE04 598 aa17.89■□□□□ 0.45
PTCHD3-201ENST00000438700 BCL2L13Q9BXK5 485 aa17.89■□□□□ 0.45
PTCHD3-201ENST00000438700 PEAK1Q9H792 1746 aa17.88■□□□□ 0.45
PTCHD3-201ENST00000438700 FCHSD2O94868 740 aa17.88■□□□□ 0.45
PTCHD3-201ENST00000438700 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
PTCHD3-201ENST00000438700 WDR63Q8IWG1 891 aa17.87■□□□□ 0.45
PTCHD3-201ENST00000438700 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
PTCHD3-201ENST00000438700 PNNQ9H307 717 aaKnown RBP17.87■□□□□ 0.45
PTCHD3-201ENST00000438700 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
PTCHD3-201ENST00000438700 HMOX1P09601 288 aa17.87■□□□□ 0.45
PTCHD3-201ENST00000438700 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
PTCHD3-201ENST00000438700 ESCO1Q5FWF5 840 aa17.87■□□□□ 0.45
PTCHD3-201ENST00000438700 STRCP1A6NGW2 1772 aa17.86■□□□□ 0.45
PTCHD3-201ENST00000438700 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
PTCHD3-201ENST00000438700 MARF1Q9Y4F3 1742 aaKnown RBP17.86■□□□□ 0.45
PTCHD3-201ENST00000438700 RARSP54136 660 aaKnown RBP17.86■□□□□ 0.45
PTCHD3-201ENST00000438700 RGS3P49796 1198 aa17.85■□□□□ 0.45
PTCHD3-201ENST00000438700 NLRP6P59044 892 aa17.84■□□□□ 0.45
PTCHD3-201ENST00000438700 NUTM2GQ5VZR2 741 aa17.84■□□□□ 0.45
PTCHD3-201ENST00000438700 PDE3AQ14432 1141 aa17.84■□□□□ 0.45
PTCHD3-201ENST00000438700 LMTK3Q96Q04 1460 aa17.84■□□□□ 0.45
PTCHD3-201ENST00000438700 USP54Q70EL1 1684 aa17.83■□□□□ 0.45
PTCHD3-201ENST00000438700 ABTB2Q8N961 1025 aa17.83■□□□□ 0.44
PTCHD3-201ENST00000438700 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
PTCHD3-201ENST00000438700 MAP3K19Q56UN5 1328 aa17.83■□□□□ 0.44
PTCHD3-201ENST00000438700 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
PTCHD3-201ENST00000438700 EIF4A2Q14240 407 aaKnown RBP17.82■□□□□ 0.44
PTCHD3-201ENST00000438700 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
PTCHD3-201ENST00000438700 RIPK4P57078 832 aa17.82■□□□□ 0.44
PTCHD3-201ENST00000438700 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
PTCHD3-201ENST00000438700 IGHDP01880 384 aa17.81■□□□□ 0.44
PTCHD3-201ENST00000438700 HSP90AB2PQ58FF8 381 aa17.81■□□□□ 0.44
PTCHD3-201ENST00000438700 ORAI2Q96SN7 254 aa17.81■□□□□ 0.44
PTCHD3-201ENST00000438700 MYH16Q9H6N6 1097 aa17.81■□□□□ 0.44
PTCHD3-201ENST00000438700 PHACTR3Q96KR7 559 aa17.81■□□□□ 0.44
PTCHD3-201ENST00000438700 PSME1Q06323 249 aa17.8■□□□□ 0.44
PTCHD3-201ENST00000438700 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
PTCHD3-201ENST00000438700 C19orf44Q9H6X5 657 aa17.8■□□□□ 0.44
PTCHD3-201ENST00000438700 TMEM94Q12767 1356 aa17.8■□□□□ 0.44
PTCHD3-201ENST00000438700 RLBP1P12271 317 aa17.8■□□□□ 0.44
PTCHD3-201ENST00000438700 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.8■□□□□ 0.44
PTCHD3-201ENST00000438700 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
PTCHD3-201ENST00000438700 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
PTCHD3-201ENST00000438700 FLT4P35916 1363 aa17.79■□□□□ 0.44
PTCHD3-201ENST00000438700 RGPD1P0DJD0 1748 aa17.78■□□□□ 0.44
PTCHD3-201ENST00000438700 C1orf167Q5SNV9 1468 aa17.78■□□□□ 0.44
PTCHD3-201ENST00000438700 FOXO3O43524 673 aa17.77■□□□□ 0.44
PTCHD3-201ENST00000438700 AMPHP49418 695 aa17.77■□□□□ 0.44
PTCHD3-201ENST00000438700 NFE2L2Q16236 605 aa17.77■□□□□ 0.44
PTCHD3-201ENST00000438700 AEBP1Q8IUX7 1158 aa17.77■□□□□ 0.44
PTCHD3-201ENST00000438700 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
PTCHD3-201ENST00000438700 SULT6B1Q6IMI4 303 aa17.76■□□□□ 0.43
PTCHD3-201ENST00000438700 KIF1AQ12756 1690 aa17.76■□□□□ 0.43
PTCHD3-201ENST00000438700 DLG5Q8TDM6 1919 aa17.76■□□□□ 0.43
PTCHD3-201ENST00000438700 C8orf34Q49A92 452 aa17.75■□□□□ 0.43
PTCHD3-201ENST00000438700 BRPF3Q9ULD4 1205 aa17.75■□□□□ 0.43
PTCHD3-201ENST00000438700 EXOSC9Q06265 439 aaKnown RBP17.75■□□□□ 0.43
PTCHD3-201ENST00000438700 FAM161AQ3B820 660 aa17.75■□□□□ 0.43
PTCHD3-201ENST00000438700 ATF3P18847 181 aa17.74■□□□□ 0.43
PTCHD3-201ENST00000438700 IL16Q14005 1332 aa17.74■□□□□ 0.43
PTCHD3-201ENST00000438700 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
PTCHD3-201ENST00000438700 MST1RQ04912 1400 aa17.74■□□□□ 0.43
PTCHD3-201ENST00000438700 LTN1O94822 1766 aa17.74■□□□□ 0.43
PTCHD3-201ENST00000438700 DCCP43146 1447 aa17.73■□□□□ 0.43
PTCHD3-201ENST00000438700 NCOA3Q9Y6Q9 1424 aa17.73■□□□□ 0.43
PTCHD3-201ENST00000438700 TRPM3Q9HCF6 1732 aaPredicted RBP17.73■□□□□ 0.43
PTCHD3-201ENST00000438700 HOXC9P31274 260 aa17.72■□□□□ 0.43
PTCHD3-201ENST00000438700 SMC4Q9NTJ3 1288 aa17.72■□□□□ 0.43
PTCHD3-201ENST00000438700 PCDHB15Q9Y5E8 787 aa17.72■□□□□ 0.43
PTCHD3-201ENST00000438700 NFAT5O94916 1531 aa17.72■□□□□ 0.43
PTCHD3-201ENST00000438700 ARHGEF10O15013 1369 aa17.72■□□□□ 0.43
PTCHD3-201ENST00000438700 KIF24Q5T7B8 1368 aa17.72■□□□□ 0.43
PTCHD3-201ENST00000438700 XIRP1Q702N8 1843 aaKnown RBP17.72■□□□□ 0.43
PTCHD3-201ENST00000438700 THUMPD2Q9BTF0 503 aaKnown RBP17.71■□□□□ 0.43
PTCHD3-201ENST00000438700 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
PTCHD3-201ENST00000438700 NFKBIBQ15653 356 aa17.69■□□□□ 0.42
PTCHD3-201ENST00000438700 ZKSCAN2Q63HK3 967 aa17.69■□□□□ 0.42
PTCHD3-201ENST00000438700 KRT28Q7Z3Y7 464 aa17.69■□□□□ 0.42
PTCHD3-201ENST00000438700 LMOD2Q6P5Q4 547 aa17.69■□□□□ 0.42
PTCHD3-201ENST00000438700 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
PTCHD3-201ENST00000438700 MSH6P52701 1360 aa17.68■□□□□ 0.42
PTCHD3-201ENST00000438700 SSH1Q8WYL5 1049 aa17.68■□□□□ 0.42
PTCHD3-201ENST00000438700 EYA1Q99502 592 aa17.68■□□□□ 0.42
PTCHD3-201ENST00000438700 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
PTCHD3-201ENST00000438700 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
PTCHD3-201ENST00000438700 CADPS2Q86UW7 1296 aa17.68■□□□□ 0.42
PTCHD3-201ENST00000438700 IGSF1Q8N6C5 1336 aa17.68■□□□□ 0.42
PTCHD3-201ENST00000438700 LMOD3Q0VAK6 560 aa17.67■□□□□ 0.42
PTCHD3-201ENST00000438700 MVPQ14764 893 aaKnown RBP17.67■□□□□ 0.42
PTCHD3-201ENST00000438700 DZIP1LQ8IYY4 767 aaKnown RBP17.67■□□□□ 0.42
PTCHD3-201ENST00000438700 KCNH5Q8NCM2 988 aa17.67■□□□□ 0.42
PTCHD3-201ENST00000438700 KDRP35968 1356 aa17.67■□□□□ 0.42
PTCHD3-201ENST00000438700 FAM83GA6ND36 823 aa17.66■□□□□ 0.42
PTCHD3-201ENST00000438700 CT47B1P0C2W7 299 aaPredicted RBP17.66■□□□□ 0.42
PTCHD3-201ENST00000438700 TRIM27P14373 513 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms