RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 RPGRIP1LQ68CZ1 1315 aa13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 RPRD2Q5VT52 1461 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 MAP4K4O95819 1239 aaPredicted RBP13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 PLEKHO1Q53GL0 409 aaPredicted RBP13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 NOL10Q9BSC4 688 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 FAM69CQ0P6D2 419 aa13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 SYCE3A1L190 88 aa13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 DHX16O60231 1041 aaKnown RBP13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 STK3Q13188 491 aa13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 PTPN23Q9H3S7 1636 aa13.32□□□□□ -0.28
SEMA4D-211ENST00000438547 IL1RAPL2Q9NP60 686 aa13.31□□□□□ -0.28
SEMA4D-211ENST00000438547 CCDC112Q8NEF3 446 aa13.31□□□□□ -0.28
SEMA4D-211ENST00000438547 THUMPD2Q9BTF0 503 aaKnown RBP13.31□□□□□ -0.28
SEMA4D-211ENST00000438547 SRGAP3O43295 1099 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 ALDH1L2Q3SY69 923 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 CCP110O43303 1012 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 ATP2B1P20020 1258 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 BLOC1S2Q6QNY1 142 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 UBE2Q2Q8WVN8 375 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 XBP1P17861 261 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 EXOC6BQ9Y2D4 811 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 CCDC66A2RUB6 948 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 RRS1Q15050 365 aaKnown RBP13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 RUFY1Q96T51 708 aa13.3□□□□□ -0.28
SEMA4D-211ENST00000438547 KDM4AO75164 1064 aa13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 TNPO1Q92973 898 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 SYTL4Q96C24 671 aaPredicted RBP13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 PDRG1Q9NUG6 133 aa13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 JAKMIP1Q96N16 626 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 ME1P48163 572 aa13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 CWC27Q6UX04 472 aaKnown RBP13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 AK7Q96M32 723 aa13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 BRMS1Q9HCU9 246 aa13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 RTEL1-TNFRSF6BF6WH68 1400 aa13.29□□□□□ -0.28
SEMA4D-211ENST00000438547 IGHDP01880 384 aa13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 NUP62CLQ9H1M0 184 aa13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 SPATA32Q96LK8 384 aa13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 ABCC11Q96J66 1382 aa13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 SSFA2P28290 1259 aa13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 NAP1L1P55209 391 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 SIL1Q9H173 461 aa13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 SART3Q15020 963 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 JMYQ8N9B5 988 aa13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
SEMA4D-211ENST00000438547 TRIM27P14373 513 aa13.27□□□□□ -0.28
SEMA4D-211ENST00000438547 NOM1Q5C9Z4 860 aaKnown RBP13.27□□□□□ -0.28
SEMA4D-211ENST00000438547 TTLL5Q6EMB2 1281 aa13.27□□□□□ -0.28
SEMA4D-211ENST00000438547 DHX8Q14562 1220 aaKnown RBP13.27□□□□□ -0.29
SEMA4D-211ENST00000438547 IFT140Q96RY7 1462 aa13.27□□□□□ -0.29
SEMA4D-211ENST00000438547 TBC1D32Q96NH3 1257 aa13.27□□□□□ -0.29
SEMA4D-211ENST00000438547 PPP6R1Q9UPN7 881 aa13.27□□□□□ -0.29
SEMA4D-211ENST00000438547 RAD21O60216 631 aa13.27□□□□□ -0.29
SEMA4D-211ENST00000438547 FILIP1LQ4L180 1135 aa13.27□□□□□ -0.29
SEMA4D-211ENST00000438547 AACSQ86V21 672 aa13.27□□□□□ -0.29
SEMA4D-211ENST00000438547 CAMSAP2Q08AD1 1489 aa13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 GPRASP1Q5JY77 1395 aa13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 SERPINC1P01008 464 aa13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 ERCC4Q92889 916 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 KIAA0586Q9BVV6 1533 aa13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 DNMBPQ6XZF7 1577 aa13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 SMARCA5O60264 1052 aaPredicted RBP13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 PDIA4P13667 645 aaKnown RBP13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 CCDC141Q6ZP82 1450 aa13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 CFAP45Q9UL16 551 aa13.26□□□□□ -0.29
SEMA4D-211ENST00000438547 CWC15Q9P013 229 aaKnown RBP13.25□□□□□ -0.29
SEMA4D-211ENST00000438547 MX1P20591 662 aa13.25□□□□□ -0.29
SEMA4D-211ENST00000438547 ZNF530Q6P9A1 599 aaPredicted RBP13.25□□□□□ -0.29
SEMA4D-211ENST00000438547 MAPKBP1O60336 1514 aa13.25□□□□□ -0.29
SEMA4D-211ENST00000438547 FILIP1Q7Z7B0 1213 aa13.25□□□□□ -0.29
SEMA4D-211ENST00000438547 NUTM1Q86Y26 1132 aa13.25□□□□□ -0.29
SEMA4D-211ENST00000438547 FYB1O15117 783 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 CAGE1Q8TC20 777 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 ARHGEF11O15085 1522 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 SNAPC4Q5SXM2 1469 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 CASTP20810 708 aaKnown RBP13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 CCDC158Q5M9N0 1113 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 CEP57L1Q8IYX8 460 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 BMP2KLQ5H9B9 411 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
SEMA4D-211ENST00000438547 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
SEMA4D-211ENST00000438547 CDR1P51861 262 aa13.23□□□□□ -0.29
SEMA4D-211ENST00000438547 KRT32Q14532 448 aa13.23□□□□□ -0.29
SEMA4D-211ENST00000438547 FERMT3Q86UX7 667 aa13.23□□□□□ -0.29
SEMA4D-211ENST00000438547 MIS18AQ9NYP9 233 aa13.23□□□□□ -0.29
SEMA4D-211ENST00000438547 OFD1O75665 1012 aa13.23□□□□□ -0.29
SEMA4D-211ENST00000438547 MCM10Q7L590 875 aa13.23□□□□□ -0.29
SEMA4D-211ENST00000438547 KIF1BPQ96EK5 621 aa13.23□□□□□ -0.29
SEMA4D-211ENST00000438547 ESCO1Q5FWF5 840 aa13.22□□□□□ -0.29
SEMA4D-211ENST00000438547 RRP12Q5JTH9 1297 aaKnown RBP13.22□□□□□ -0.29
SEMA4D-211ENST00000438547 MAGI1Q96QZ7 1491 aaPredicted RBP13.22□□□□□ -0.29
SEMA4D-211ENST00000438547 CCDC83Q8IWF9 413 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms