RNA–Protein interactions for RNA: ENST00000438444.5

COA1-209, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

TSL 2

Gene COA1, Length 3,223 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-209ENST00000438444 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
COA1-209ENST00000438444 TTC21BQ7Z4L5 1316 aa11.72□□□□□ -0.53
COA1-209ENST00000438444 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
COA1-209ENST00000438444 TMEM94Q12767 1356 aa11.71□□□□□ -0.53
COA1-209ENST00000438444 ANP32AP39687 249 aaKnown RBP11.71□□□□□ -0.53
COA1-209ENST00000438444 TRMT2AQ8IZ69 625 aaKnown RBP11.71□□□□□ -0.53
COA1-209ENST00000438444 FYB1O15117 783 aa11.71□□□□□ -0.54
COA1-209ENST00000438444 CRBNQ96SW2 442 aa11.71□□□□□ -0.54
COA1-209ENST00000438444 PDE3BQ13370 1112 aa11.7□□□□□ -0.54
COA1-209ENST00000438444 MSH6P52701 1360 aa11.7□□□□□ -0.54
COA1-209ENST00000438444 NCKAP5LQ9HCH0 1330 aa11.69□□□□□ -0.54
COA1-209ENST00000438444 CHGAP10645 457 aaKnown RBP11.69□□□□□ -0.54
COA1-209ENST00000438444 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
COA1-209ENST00000438444 IPO9Q96P70 1041 aaKnown RBP11.69□□□□□ -0.54
COA1-209ENST00000438444 KNSTRNQ9Y448 316 aa11.69□□□□□ -0.54
COA1-209ENST00000438444 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
COA1-209ENST00000438444 IL16Q14005 1332 aa11.68□□□□□ -0.54
COA1-209ENST00000438444 DEKP35659 375 aaKnown RBP11.67□□□□□ -0.54
COA1-209ENST00000438444 POGKQ9P215 609 aa11.67□□□□□ -0.54
COA1-209ENST00000438444 FLT4P35916 1363 aa11.67□□□□□ -0.54
COA1-209ENST00000438444 PDE4AP27815 886 aa11.67□□□□□ -0.54
COA1-209ENST00000438444 WAPLQ7Z5K2 1190 aa11.67□□□□□ -0.54
COA1-209ENST00000438444 SENP3Q9H4L4 574 aaPredicted RBP11.67□□□□□ -0.54
COA1-209ENST00000438444 ACEP12821 1306 aa11.66□□□□□ -0.54
COA1-209ENST00000438444 WDR43Q15061 677 aaKnown RBP eCLIP11.65□□□□□ -0.541e-7■■■□□ 18.5
COA1-209ENST00000438444 CADPS2Q86UW7 1296 aa11.65□□□□□ -0.54
COA1-209ENST00000438444 BCL9O00512 1426 aa11.65□□□□□ -0.54
COA1-209ENST00000438444 PLEKHF1Q96S99 279 aa11.65□□□□□ -0.54
COA1-209ENST00000438444 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
COA1-209ENST00000438444 LAS1LQ9Y4W2 734 aaKnown RBP11.64□□□□□ -0.55
COA1-209ENST00000438444 TOGARAM1Q9Y4F4 1720 aa11.64□□□□□ -0.55
COA1-209ENST00000438444 CABP2Q9NPB3 220 aa11.64□□□□□ -0.55
COA1-209ENST00000438444 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
COA1-209ENST00000438444 QSER1Q2KHR3 1735 aa11.63□□□□□ -0.55
COA1-209ENST00000438444 SOS1Q07889 1333 aaPredicted RBP11.63□□□□□ -0.55
COA1-209ENST00000438444 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
COA1-209ENST00000438444 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
COA1-209ENST00000438444 IGSF1Q8N6C5 1336 aa11.62□□□□□ -0.55
COA1-209ENST00000438444 TNNT2P45379 298 aaPredicted RBP11.62□□□□□ -0.55
COA1-209ENST00000438444 CABP1Q9NZU7 370 aa11.62□□□□□ -0.55
COA1-209ENST00000438444 TCERG1O14776 1098 aaKnown RBP11.62□□□□□ -0.55
COA1-209ENST00000438444 BACH2Q9BYV9 841 aa11.61□□□□□ -0.55
COA1-209ENST00000438444 APAF1O14727 1248 aa11.61□□□□□ -0.55
COA1-209ENST00000438444 DUSP27Q5VZP5 1158 aa11.61□□□□□ -0.55
COA1-209ENST00000438444 BABAM1Q9NWV8 329 aa11.61□□□□□ -0.55
COA1-209ENST00000438444 SPATA31A3Q5VYP0 1347 aa11.61□□□□□ -0.55
COA1-209ENST00000438444 C5P01031 1676 aa11.6□□□□□ -0.55
COA1-209ENST00000438444 IL13P35225 146 aa11.6□□□□□ -0.55
COA1-209ENST00000438444 SLC4A3P48751 1232 aa11.6□□□□□ -0.55
COA1-209ENST00000438444 SLC26A8Q96RN1 970 aa11.6□□□□□ -0.55
COA1-209ENST00000438444 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
COA1-209ENST00000438444 KCNH5Q8NCM2 988 aa11.6□□□□□ -0.55
COA1-209ENST00000438444 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
COA1-209ENST00000438444 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
COA1-209ENST00000438444 NPHP3Q7Z494 1330 aa11.6□□□□□ -0.55
COA1-209ENST00000438444 NHSQ6T4R5 1651 aa11.6□□□□□ -0.55
COA1-209ENST00000438444 COL5A3P25940 1745 aaPredicted RBP11.59□□□□□ -0.55
COA1-209ENST00000438444 CT47B1P0C2W7 299 aaPredicted RBP11.59□□□□□ -0.55
COA1-209ENST00000438444 SLIT2O94813 1529 aa11.59□□□□□ -0.55
COA1-209ENST00000438444 HTATSF1O43719 755 aaKnown RBP11.58□□□□□ -0.56
COA1-209ENST00000438444 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
COA1-209ENST00000438444 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
COA1-209ENST00000438444 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.56
COA1-209ENST00000438444 POLKQ9UBT6 870 aa11.58□□□□□ -0.56
COA1-209ENST00000438444 NUP188Q5SRE5 1749 aa11.58□□□□□ -0.56
COA1-209ENST00000438444 COL5A2P05997 1499 aaPredicted RBP11.58□□□□□ -0.56
COA1-209ENST00000438444 BCAR3O75815 825 aa11.58□□□□□ -0.56
COA1-209ENST00000438444 SRPK2P78362 688 aaKnown RBP11.57□□□□□ -0.56
COA1-209ENST00000438444 COL24A1Q17RW2 1714 aa11.57□□□□□ -0.56
COA1-209ENST00000438444 FCHSD2O94868 740 aa11.57□□□□□ -0.56
COA1-209ENST00000438444 RGS3P49796 1198 aa11.57□□□□□ -0.56
COA1-209ENST00000438444 LY75O60449 1722 aa11.57□□□□□ -0.56
COA1-209ENST00000438444 ITGB4P16144 1822 aa11.56□□□□□ -0.56
COA1-209ENST00000438444 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
COA1-209ENST00000438444 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
COA1-209ENST00000438444 PXDNLA1KZ92 1463 aa11.56□□□□□ -0.56
COA1-209ENST00000438444 PSME1Q06323 249 aa11.55□□□□□ -0.56
COA1-209ENST00000438444 RRP7AQ9Y3A4 280 aaKnown RBP11.55□□□□□ -0.56
COA1-209ENST00000438444 CEMIPQ8WUJ3 1361 aa11.55□□□□□ -0.56
COA1-209ENST00000438444 LAMB2P55268 1798 aa11.55□□□□□ -0.56
COA1-209ENST00000438444 SBF2Q86WG5 1849 aa11.55□□□□□ -0.56
COA1-209ENST00000438444 SLFN5Q08AF3 891 aa11.54□□□□□ -0.56
COA1-209ENST00000438444 RSPH6AQ9H0K4 717 aa11.54□□□□□ -0.56
COA1-209ENST00000438444 RGS12O14924 1447 aa11.54□□□□□ -0.56
COA1-209ENST00000438444 STK26Q9P289 416 aa11.54□□□□□ -0.56
COA1-209ENST00000438444 BCORQ6W2J9 1755 aa11.54□□□□□ -0.56
COA1-209ENST00000438444 CRB1P82279 1406 aa11.54□□□□□ -0.56
COA1-209ENST00000438444 TJP1Q07157 1748 aa11.53□□□□□ -0.56
COA1-209ENST00000438444 BRINP3Q76B58 766 aa11.53□□□□□ -0.56
COA1-209ENST00000438444 CFAP53Q96M91 514 aa11.53□□□□□ -0.56
COA1-209ENST00000438444 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.565e-6■■■■□ 22.9
COA1-209ENST00000438444 NEFMP07197 916 aa11.52□□□□□ -0.56
COA1-209ENST00000438444 MS4A1P11836 297 aa11.52□□□□□ -0.56
COA1-209ENST00000438444 MORC1Q86VD1 984 aa11.52□□□□□ -0.56
COA1-209ENST00000438444 ARHGEF25Q86VW2 580 aa11.52□□□□□ -0.56
COA1-209ENST00000438444 KIAA0232Q92628 1395 aa11.52□□□□□ -0.56
COA1-209ENST00000438444 IP6K1Q92551 441 aa11.52□□□□□ -0.57
COA1-209ENST00000438444 ZNF428Q96B54 188 aa11.52□□□□□ -0.57
COA1-209ENST00000438444 RUNDC1Q96C34 613 aa11.52□□□□□ -0.57
COA1-209ENST00000438444 COG3Q96JB2 828 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms