RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 TEX35Q5T0J7 233 aa12.31□□□□□ -0.44
SHPRH-206ENST00000438092 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
SHPRH-206ENST00000438092 IL1RAPL2Q9NP60 686 aa12.31□□□□□ -0.44
SHPRH-206ENST00000438092 NEFHP12036 1026 aa12.31□□□□□ -0.44
SHPRH-206ENST00000438092 LRP2BPQ9P2M1 347 aa12.31□□□□□ -0.44
SHPRH-206ENST00000438092 ZNF76P36508 570 aa12.3□□□□□ -0.44
SHPRH-206ENST00000438092 ANKRD62A6NC57 917 aa12.3□□□□□ -0.44
SHPRH-206ENST00000438092 CWC27Q6UX04 472 aaKnown RBP12.3□□□□□ -0.44
SHPRH-206ENST00000438092 IDH1O75874 414 aaKnown RBP12.29□□□□□ -0.44
SHPRH-206ENST00000438092 ANKLE2Q86XL3 938 aa12.29□□□□□ -0.44
SHPRH-206ENST00000438092 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
SHPRH-206ENST00000438092 FGD6Q6ZV73 1430 aa12.29□□□□□ -0.44
SHPRH-206ENST00000438092 SCAPERQ9BY12 1400 aa12.29□□□□□ -0.44
SHPRH-206ENST00000438092 SLC4A8Q2Y0W8 1093 aa12.29□□□□□ -0.44
SHPRH-206ENST00000438092 FILIP1LQ4L180 1135 aa12.29□□□□□ -0.44
SHPRH-206ENST00000438092 TTLL12Q14166 644 aaPredicted RBP12.29□□□□□ -0.44
SHPRH-206ENST00000438092 NACAP1Q9BZK3 213 aa12.29□□□□□ -0.44
SHPRH-206ENST00000438092 WDR78Q5VTH9 848 aa12.28□□□□□ -0.44
SHPRH-206ENST00000438092 ERC1Q8IUD2 1116 aa12.28□□□□□ -0.44
SHPRH-206ENST00000438092 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
SHPRH-206ENST00000438092 RRBP1Q9P2E9 1410 aaKnown RBP12.28□□□□□ -0.44
SHPRH-206ENST00000438092 NASPP49321 788 aaPredicted RBP12.28□□□□□ -0.44
SHPRH-206ENST00000438092 ME1P48163 572 aa12.28□□□□□ -0.44
SHPRH-206ENST00000438092 SERPINC1P01008 464 aa12.28□□□□□ -0.44
SHPRH-206ENST00000438092 TRMT1LQ7Z2T5 733 aaKnown RBP12.28□□□□□ -0.44
SHPRH-206ENST00000438092 FYCO1Q9BQS8 1478 aa12.28□□□□□ -0.44
SHPRH-206ENST00000438092 SRGAP3O43295 1099 aa12.27□□□□□ -0.44
SHPRH-206ENST00000438092 MPRIPQ6WCQ1 1025 aa12.27□□□□□ -0.44
SHPRH-206ENST00000438092 PPM1FP49593 454 aaPredicted RBP12.27□□□□□ -0.45
SHPRH-206ENST00000438092 RTEL1-TNFRSF6BF6WH68 1400 aa12.27□□□□□ -0.45
SHPRH-206ENST00000438092 DEF6Q9H4E7 631 aa12.27□□□□□ -0.45
SHPRH-206ENST00000438092 PRG4Q92954 1404 aaPredicted RBP12.27□□□□□ -0.45
SHPRH-206ENST00000438092 HIP1O00291 1037 aa12.27□□□□□ -0.45
SHPRH-206ENST00000438092 DCTN1Q14203 1278 aa12.27□□□□□ -0.45
SHPRH-206ENST00000438092 NUTM1Q86Y26 1132 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 TRIM22Q8IYM9 498 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 SRCIN1Q9C0H9 1055 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 ANKIB1Q9P2G1 1089 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 CYP46A1Q9Y6A2 500 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 CDR1P51861 262 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 HSP90B2PQ58FF3 399 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 ZNF396Q96N95 335 aaPredicted RBP12.26□□□□□ -0.45
SHPRH-206ENST00000438092 THUMPD2Q9BTF0 503 aaKnown RBP12.26□□□□□ -0.45
SHPRH-206ENST00000438092 CUX1P39880 1505 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 MINDY4BA8MYZ0 360 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 WAPLQ7Z5K2 1190 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 SMARCE1Q969G3 411 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 WWC3Q9ULE0 1092 aa12.26□□□□□ -0.45
SHPRH-206ENST00000438092 NFKBIBQ15653 356 aa12.25□□□□□ -0.45
SHPRH-206ENST00000438092 MAP7D2Q96T17 732 aa12.25□□□□□ -0.45
SHPRH-206ENST00000438092 DHX8Q14562 1220 aaKnown RBP12.25□□□□□ -0.45
SHPRH-206ENST00000438092 ZPR1O75312 459 aa12.25□□□□□ -0.45
SHPRH-206ENST00000438092 IGHMBP2P38935 993 aaKnown RBP12.25□□□□□ -0.45
SHPRH-206ENST00000438092 SSR1P43307 286 aaKnown RBP12.25□□□□□ -0.45
SHPRH-206ENST00000438092 IGF1RP08069 1367 aa12.25□□□□□ -0.45
SHPRH-206ENST00000438092 FAM43AQ8N2R8 423 aa12.25□□□□□ -0.45
SHPRH-206ENST00000438092 DDX11Q96FC9 970 aa12.25□□□□□ -0.45
SHPRH-206ENST00000438092 UBAC1Q9BSL1 405 aa12.25□□□□□ -0.45
SHPRH-206ENST00000438092 ARGLU1Q9NWB6 273 aaPredicted RBP12.25□□□□□ -0.45
SHPRH-206ENST00000438092 METTL24Q5JXM2 366 aa12.25□□□□□ -0.45
SHPRH-206ENST00000438092 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
SHPRH-206ENST00000438092 MCM10Q7L590 875 aa12.24□□□□□ -0.45
SHPRH-206ENST00000438092 RDXP35241 583 aaKnown RBP12.24□□□□□ -0.45
SHPRH-206ENST00000438092 TSPY26PQ9H489 355 aa12.24□□□□□ -0.45
SHPRH-206ENST00000438092 NCOA2Q15596 1464 aa12.24□□□□□ -0.45
SHPRH-206ENST00000438092 CCDC97Q96F63 343 aaPredicted RBP12.24□□□□□ -0.45
SHPRH-206ENST00000438092 CENPHQ9H3R5 247 aa12.24□□□□□ -0.45
SHPRH-206ENST00000438092 TRAK2O60296 914 aa12.24□□□□□ -0.45
SHPRH-206ENST00000438092 CCDC82Q8N4S0 544 aa12.24□□□□□ -0.45
SHPRH-206ENST00000438092 GRM1Q13255 1194 aa12.23□□□□□ -0.45
SHPRH-206ENST00000438092 NOM1Q5C9Z4 860 aaKnown RBP12.23□□□□□ -0.45
SHPRH-206ENST00000438092 JAKMIP1Q96N16 626 aaKnown RBP12.23□□□□□ -0.45
SHPRH-206ENST00000438092 SCLT1Q96NL6 688 aa12.23□□□□□ -0.45
SHPRH-206ENST00000438092 CEP126Q9P2H0 1117 aa12.23□□□□□ -0.45
SHPRH-206ENST00000438092 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-206ENST00000438092 CCT4P50991 539 aaKnown RBP12.23□□□□□ -0.45
SHPRH-206ENST00000438092 CRACR2BQ8N4Y2 399 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-206ENST00000438092 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
SHPRH-206ENST00000438092 PLCD4Q9BRC7 762 aa12.23□□□□□ -0.45
SHPRH-206ENST00000438092 ACBD3Q9H3P7 528 aa12.23□□□□□ -0.45
SHPRH-206ENST00000438092 RSPH6AQ9H0K4 717 aa12.22□□□□□ -0.45
SHPRH-206ENST00000438092 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
SHPRH-206ENST00000438092 CFTRP13569 1480 aa12.22□□□□□ -0.45
SHPRH-206ENST00000438092 SMARCA5O60264 1052 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-206ENST00000438092 MYD88Q99836 296 aa12.22□□□□□ -0.45
SHPRH-206ENST00000438092 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
SHPRH-206ENST00000438092 NEBLO76041 1014 aa12.22□□□□□ -0.45
SHPRH-206ENST00000438092 LARP1BQ659C4 914 aaKnown RBP12.22□□□□□ -0.45
SHPRH-206ENST00000438092 TNMDQ9H2S6 317 aa12.22□□□□□ -0.45
SHPRH-206ENST00000438092 ZNHIT6Q9NWK9 470 aaKnown RBP12.22□□□□□ -0.45
SHPRH-206ENST00000438092 LIG1P18858 919 aa12.22□□□□□ -0.45
SHPRH-206ENST00000438092 STARD3NLO95772 234 aa12.21□□□□□ -0.45
SHPRH-206ENST00000438092 FAM193AP78312 1265 aa12.21□□□□□ -0.45
SHPRH-206ENST00000438092 SEPT7Q16181 437 aaKnown RBP12.21□□□□□ -0.45
SHPRH-206ENST00000438092 ZNF692Q9BU19 519 aaPredicted RBP12.21□□□□□ -0.45
SHPRH-206ENST00000438092 EXOC6BQ9Y2D4 811 aa12.21□□□□□ -0.45
SHPRH-206ENST00000438092 SYNJ2O15056 1496 aa12.21□□□□□ -0.45
SHPRH-206ENST00000438092 AIDAQ96BJ3 306 aa12.21□□□□□ -0.45
SHPRH-206ENST00000438092 TMOD2Q9NZR1 351 aa12.21□□□□□ -0.45
SHPRH-206ENST00000438092 CCDC39Q9UFE4 941 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms