RNA–Protein interactions for RNA: ENST00000437966.3

CHRNA7-202, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 1,788 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-202ENST00000437966 PHF23Q9BUL5 403 aaPredicted RBP25.63■■□□□ 1.69
CHRNA7-202ENST00000437966 FLT4P35916 1363 aa25.62■■□□□ 1.69
CHRNA7-202ENST00000437966 TRMT2AQ8IZ69 625 aaKnown RBP25.62■■□□□ 1.69
CHRNA7-202ENST00000437966 USP54Q70EL1 1684 aa25.62■■□□□ 1.69
CHRNA7-202ENST00000437966 SULT6B1Q6IMI4 303 aa25.61■■□□□ 1.69
CHRNA7-202ENST00000437966 HOXC9P31274 260 aa25.61■■□□□ 1.69
CHRNA7-202ENST00000437966 RIPK4P57078 832 aa25.61■■□□□ 1.69
CHRNA7-202ENST00000437966 TRPM3Q9HCF6 1732 aaPredicted RBP25.6■■□□□ 1.69
CHRNA7-202ENST00000437966 E9PSI1 815 aa25.6■■□□□ 1.69
CHRNA7-202ENST00000437966 CCDC27Q2M243 656 aa25.6■■□□□ 1.69
CHRNA7-202ENST00000437966 TRIM35Q9UPQ4 493 aa25.6■■□□□ 1.69
CHRNA7-202ENST00000437966 BRINP3Q76B58 766 aa25.59■■□□□ 1.69
CHRNA7-202ENST00000437966 LTV1Q96GA3 475 aaPredicted RBP25.59■■□□□ 1.69
CHRNA7-202ENST00000437966 SLAIN2Q9P270 581 aa25.59■■□□□ 1.69
CHRNA7-202ENST00000437966 GCP02774 474 aa25.57■■□□□ 1.68
CHRNA7-202ENST00000437966 NEFMP07197 916 aa25.57■■□□□ 1.68
CHRNA7-202ENST00000437966 WDR63Q8IWG1 891 aa25.57■■□□□ 1.68
CHRNA7-202ENST00000437966 RNF123Q5XPI4 1314 aa25.57■■□□□ 1.68
CHRNA7-202ENST00000437966 KCNH5Q8NCM2 988 aa25.56■■□□□ 1.68
CHRNA7-202ENST00000437966 NPHP3Q7Z494 1330 aa25.55■■□□□ 1.68
CHRNA7-202ENST00000437966 NFAT5O94916 1531 aa25.55■■□□□ 1.68
CHRNA7-202ENST00000437966 NFE2L2Q16236 605 aa25.54■■□□□ 1.68
CHRNA7-202ENST00000437966 NCBP3Q53F19 620 aaKnown RBP25.54■■□□□ 1.68
CHRNA7-202ENST00000437966 EYA1Q99502 592 aa25.54■■□□□ 1.68
CHRNA7-202ENST00000437966 IP6K1Q92551 441 aa25.52■■□□□ 1.68
CHRNA7-202ENST00000437966 USP19O94966 1318 aa25.52■■□□□ 1.68
CHRNA7-202ENST00000437966 RRP1P56182 461 aaKnown RBP25.51■■□□□ 1.67
CHRNA7-202ENST00000437966 CABLES1Q8TDN4 633 aa25.51■■□□□ 1.67
CHRNA7-202ENST00000437966 LTN1O94822 1766 aa25.5■■□□□ 1.67
CHRNA7-202ENST00000437966 KIF24Q5T7B8 1368 aa25.5■■□□□ 1.67
CHRNA7-202ENST00000437966 RGPD1P0DJD0 1748 aa25.5■■□□□ 1.67
CHRNA7-202ENST00000437966 PXDNQ92626 1479 aa25.49■■□□□ 1.67
CHRNA7-202ENST00000437966 SLIT3O75094 1523 aa25.49■■□□□ 1.67
CHRNA7-202ENST00000437966 PLIN1O60240 522 aa25.49■■□□□ 1.67
CHRNA7-202ENST00000437966 ARHGEF25Q86VW2 580 aa25.49■■□□□ 1.67
CHRNA7-202ENST00000437966 ALS2Q96Q42 1657 aa25.49■■□□□ 1.67
CHRNA7-202ENST00000437966 ARHGEF10O15013 1369 aa25.49■■□□□ 1.67
CHRNA7-202ENST00000437966 ZC3H6P61129 1189 aaKnown RBP25.49■■□□□ 1.67
CHRNA7-202ENST00000437966 THUMPD2Q9BTF0 503 aaKnown RBP25.49■■□□□ 1.67
CHRNA7-202ENST00000437966 USHBP1Q8N6Y0 703 aa25.47■■□□□ 1.67
CHRNA7-202ENST00000437966 TSR2Q969E8 191 aaKnown RBP25.47■■□□□ 1.67
CHRNA7-202ENST00000437966 SPATA31A3Q5VYP0 1347 aa25.47■■□□□ 1.67
CHRNA7-202ENST00000437966 IGSF1Q8N6C5 1336 aa25.47■■□□□ 1.67
CHRNA7-202ENST00000437966 RTL1A6NKG5 1358 aa25.47■■□□□ 1.67
CHRNA7-202ENST00000437966 MED1Q15648 1581 aaPredicted RBP25.47■■□□□ 1.67
CHRNA7-202ENST00000437966 TNS3Q68CZ2 1445 aa25.46■■□□□ 1.67
CHRNA7-202ENST00000437966 FAM83GA6ND36 823 aa25.45■■□□□ 1.66
CHRNA7-202ENST00000437966 DCTN1Q14203 1278 aa25.44■■□□□ 1.66
CHRNA7-202ENST00000437966 MYH16Q9H6N6 1097 aa25.44■■□□□ 1.66
CHRNA7-202ENST00000437966 AXIN2Q9Y2T1 843 aa25.44■■□□□ 1.66
CHRNA7-202ENST00000437966 LAS1LQ9Y4W2 734 aaKnown RBP25.43■■□□□ 1.66
CHRNA7-202ENST00000437966 LRRC59Q96AG4 307 aaKnown RBP25.42■■□□□ 1.66
CHRNA7-202ENST00000437966 NBPF6Q5VWK0 638 aa25.41■■□□□ 1.66
CHRNA7-202ENST00000437966 NBPF4Q96M43 638 aa25.41■■□□□ 1.66
CHRNA7-202ENST00000437966 FANCIQ9NVI1 1328 aa25.41■■□□□ 1.66
CHRNA7-202ENST00000437966 BCAR3O75815 825 aa25.41■■□□□ 1.66
CHRNA7-202ENST00000437966 MTHFSDQ2M296 383 aaKnown RBP25.4■■□□□ 1.66
CHRNA7-202ENST00000437966 KDRP35968 1356 aa25.4■■□□□ 1.66
CHRNA7-202ENST00000437966 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
CHRNA7-202ENST00000437966 IL16Q14005 1332 aa25.39■■□□□ 1.66
CHRNA7-202ENST00000437966 ANKRD24Q8TF21 1146 aa25.39■■□□□ 1.65
CHRNA7-202ENST00000437966 DLG5Q8TDM6 1919 aa25.37■■□□□ 1.65
CHRNA7-202ENST00000437966 EXOSC9Q06265 439 aaKnown RBP25.37■■□□□ 1.65
CHRNA7-202ENST00000437966 LTBP4Q8N2S1 1624 aa25.37■■□□□ 1.65
CHRNA7-202ENST00000437966 CHRNA2Q15822 529 aa25.36■■□□□ 1.65
CHRNA7-202ENST00000437966 ERICH6BQ5W0A0 696 aa25.36■■□□□ 1.65
CHRNA7-202ENST00000437966 MCM10Q7L590 875 aa25.36■■□□□ 1.65
CHRNA7-202ENST00000437966 LMOD3Q0VAK6 560 aa25.36■■□□□ 1.65
CHRNA7-202ENST00000437966 C20orf194Q5TEA3 1177 aa25.36■■□□□ 1.65
CHRNA7-202ENST00000437966 EXOC6Q8TAG9 804 aa25.34■■□□□ 1.65
CHRNA7-202ENST00000437966 PPP4R2Q9NY27 417 aa25.34■■□□□ 1.65
CHRNA7-202ENST00000437966 PHRF1Q9P1Y6 1649 aaKnown RBP25.34■■□□□ 1.65
CHRNA7-202ENST00000437966 RGPD2P0DJD1 1756 aa25.33■■□□□ 1.65
CHRNA7-202ENST00000437966 RARSP54136 660 aaKnown RBP25.31■■□□□ 1.64
CHRNA7-202ENST00000437966 CALD1Q05682 793 aaKnown RBP25.31■■□□□ 1.64
CHRNA7-202ENST00000437966 B4GALNT3Q6L9W6 998 aa25.31■■□□□ 1.64
CHRNA7-202ENST00000437966 BCL2L13Q9BXK5 485 aa25.31■■□□□ 1.64
CHRNA7-202ENST00000437966 KIAA0232Q92628 1395 aa25.3■■□□□ 1.64
CHRNA7-202ENST00000437966 RGPD5Q99666 1765 aa25.3■■□□□ 1.64
CHRNA7-202ENST00000437966 ZNF853P0CG23 659 aa25.29■■□□□ 1.64
CHRNA7-202ENST00000437966 GAS2L2Q8NHY3 880 aa25.29■■□□□ 1.64
CHRNA7-202ENST00000437966 CRBNQ96SW2 442 aa25.29■■□□□ 1.64
CHRNA7-202ENST00000437966 MBIPQ9NS73 344 aa25.29■■□□□ 1.64
CHRNA7-202ENST00000437966 IFT57Q9NWB7 429 aa25.29■■□□□ 1.64
CHRNA7-202ENST00000437966 GNAI1P63096 354 aa25.28■■□□□ 1.64
CHRNA7-202ENST00000437966 HAP1P54257 671 aaPredicted RBP25.28■■□□□ 1.64
CHRNA7-202ENST00000437966 CRYBG1Q9Y4K1 1723 aa25.28■■□□□ 1.64
CHRNA7-202ENST00000437966 NHSL1Q5SYE7 1610 aa25.27■■□□□ 1.64
CHRNA7-202ENST00000437966 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.26■■□□□ 1.63
CHRNA7-202ENST00000437966 CFAP44Q96MT7 982 aa25.26■■□□□ 1.63
CHRNA7-202ENST00000437966 ERBB3P21860 1342 aa25.26■■□□□ 1.63
CHRNA7-202ENST00000437966 RTF1Q92541 710 aaKnown RBP25.26■■□□□ 1.63
CHRNA7-202ENST00000437966 FRAT1Q92837 279 aaPredicted RBP25.25■■□□□ 1.63
CHRNA7-202ENST00000437966 NLRP2Q9NX02 1062 aa25.25■■□□□ 1.63
CHRNA7-202ENST00000437966 COL18A1P39060 1754 aa25.24■■□□□ 1.63
CHRNA7-202ENST00000437966 ELL2O00472 640 aaPredicted RBP25.23■■□□□ 1.63
CHRNA7-202ENST00000437966 CSB-PGBD3P0DP91 1061 aa25.23■■□□□ 1.63
CHRNA7-202ENST00000437966 MIS18AQ9NYP9 233 aa25.23■■□□□ 1.63
CHRNA7-202ENST00000437966 ROBO1Q9Y6N7 1651 aa25.23■■□□□ 1.63
CHRNA7-202ENST00000437966 GNAT3A8MTJ3 354 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms