RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 NOB1Q9ULX3 412 aaKnown RBP15.45■□□□□ 0.06
TMEM116-202ENST00000437003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.44■□□□□ 0.06
TMEM116-202ENST00000437003 TPM2P07951 284 aa15.44■□□□□ 0.06
TMEM116-202ENST00000437003 CT47B1P0C2W7 299 aaPredicted RBP15.44■□□□□ 0.06
TMEM116-202ENST00000437003 GBP4Q96PP9 640 aa15.43■□□□□ 0.06
TMEM116-202ENST00000437003 ISY1Q9ULR0 285 aaKnown RBP15.43■□□□□ 0.06
TMEM116-202ENST00000437003 WAPLQ7Z5K2 1190 aa15.43■□□□□ 0.06
TMEM116-202ENST00000437003 COL3A1P02461 1466 aaPredicted RBP15.43■□□□□ 0.06
TMEM116-202ENST00000437003 ATF7IPQ6VMQ6 1270 aa15.42■□□□□ 0.06
TMEM116-202ENST00000437003 MED14O60244 1454 aa15.42■□□□□ 0.06
TMEM116-202ENST00000437003 TMEM57Q8N5G2 664 aa15.42■□□□□ 0.06
TMEM116-202ENST00000437003 ARHGEF40Q8TER5 1519 aa15.42■□□□□ 0.06
TMEM116-202ENST00000437003 MLECQ14165 292 aa15.41■□□□□ 0.06
TMEM116-202ENST00000437003 CLTCQ00610 1675 aaKnown RBP15.41■□□□□ 0.06
TMEM116-202ENST00000437003 DDIT3P35638 169 aa15.41■□□□□ 0.06
TMEM116-202ENST00000437003 PDCL3Q9H2J4 239 aa15.41■□□□□ 0.06
TMEM116-202ENST00000437003 DDX19BQ9UMR2 479 aa15.41■□□□□ 0.06
TMEM116-202ENST00000437003 AK9Q5TCS8 1911 aa15.4■□□□□ 0.06
TMEM116-202ENST00000437003 NASPP49321 788 aaPredicted RBP15.4■□□□□ 0.06
TMEM116-202ENST00000437003 ANKRD26Q9UPS8 1709 aa15.4■□□□□ 0.06
TMEM116-202ENST00000437003 LNPKQ9C0E8 428 aa15.4■□□□□ 0.06
TMEM116-202ENST00000437003 PPP6R1Q9UPN7 881 aa15.4■□□□□ 0.06
TMEM116-202ENST00000437003 CD2BP2O95400 341 aaKnown RBP15.39■□□□□ 0.05
TMEM116-202ENST00000437003 RAB3GAP1Q15042 981 aa15.39■□□□□ 0.05
TMEM116-202ENST00000437003 TSPOAP1O95153 1857 aa15.39■□□□□ 0.05
TMEM116-202ENST00000437003 PNPLA6Q8IY17 1366 aa15.39■□□□□ 0.05
TMEM116-202ENST00000437003 HMOX1P09601 288 aa15.39■□□□□ 0.05
TMEM116-202ENST00000437003 ARID3AQ99856 593 aa15.39■□□□□ 0.05
TMEM116-202ENST00000437003 THUMPD2Q9BTF0 503 aaKnown RBP15.39■□□□□ 0.05
TMEM116-202ENST00000437003 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
TMEM116-202ENST00000437003 IL16Q14005 1332 aa15.39■□□□□ 0.05
TMEM116-202ENST00000437003 SMC5Q8IY18 1101 aa15.38■□□□□ 0.05
TMEM116-202ENST00000437003 FCHSD2O94868 740 aa15.38■□□□□ 0.05
TMEM116-202ENST00000437003 MSNP26038 577 aaKnown RBP15.38■□□□□ 0.05
TMEM116-202ENST00000437003 PRKAR2BP31323 418 aa15.38■□□□□ 0.05
TMEM116-202ENST00000437003 ELL2O00472 640 aaPredicted RBP15.37■□□□□ 0.05
TMEM116-202ENST00000437003 SSFA2P28290 1259 aa15.37■□□□□ 0.05
TMEM116-202ENST00000437003 CCDC173Q0VFZ6 552 aa15.37■□□□□ 0.05
TMEM116-202ENST00000437003 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
TMEM116-202ENST00000437003 SKOR2Q2VWA4 1001 aaPredicted RBP15.37■□□□□ 0.05
TMEM116-202ENST00000437003 ZSCAN30Q86W11 494 aa15.37■□□□□ 0.05
TMEM116-202ENST00000437003 ANP32BQ92688 251 aaKnown RBP15.37■□□□□ 0.05
TMEM116-202ENST00000437003 RBM42Q9BTD8 480 aaKnown RBP15.37■□□□□ 0.05
TMEM116-202ENST00000437003 POLKQ9UBT6 870 aa15.37■□□□□ 0.05
TMEM116-202ENST00000437003 RIMS2Q9UQ26 1411 aa15.37■□□□□ 0.05
TMEM116-202ENST00000437003 FAM13BQ9NYF5 915 aa15.36■□□□□ 0.05
TMEM116-202ENST00000437003 RBM25P49756 843 aaKnown RBP15.36■□□□□ 0.05
TMEM116-202ENST00000437003 SNX21Q969T3 373 aa15.36■□□□□ 0.05
TMEM116-202ENST00000437003 DDX49Q9Y6V7 483 aaKnown RBP15.36■□□□□ 0.05
TMEM116-202ENST00000437003 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
TMEM116-202ENST00000437003 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
TMEM116-202ENST00000437003 R3HCC1Q9Y3T6 440 aaKnown RBP15.35■□□□□ 0.05
TMEM116-202ENST00000437003 KIF20BQ96Q89 1820 aa15.35■□□□□ 0.05
TMEM116-202ENST00000437003 NCLP19338 710 aaKnown RBP15.35■□□□□ 0.05
TMEM116-202ENST00000437003 C1orf115Q9H7X2 142 aa15.35■□□□□ 0.05
TMEM116-202ENST00000437003 DIP2BQ9P265 1576 aa15.34■□□□□ 0.05
TMEM116-202ENST00000437003 KIF16BQ96L93 1317 aa15.34■□□□□ 0.05
TMEM116-202ENST00000437003 IPO8O15397 1037 aaKnown RBP15.34■□□□□ 0.05
TMEM116-202ENST00000437003 OFD1O75665 1012 aa15.34■□□□□ 0.05
TMEM116-202ENST00000437003 CDK11BP21127 795 aaKnown RBP15.34■□□□□ 0.05
TMEM116-202ENST00000437003 ZBTB40Q9NUA8 1239 aa15.34■□□□□ 0.05
TMEM116-202ENST00000437003 AGLP35573 1532 aa15.33■□□□□ 0.05
TMEM116-202ENST00000437003 PHACTR3Q96KR7 559 aa15.33■□□□□ 0.04
TMEM116-202ENST00000437003 ATP7BP35670 1465 aa15.33■□□□□ 0.04
TMEM116-202ENST00000437003 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.04
TMEM116-202ENST00000437003 PPP1R9BQ96SB3 815 aa15.33■□□□□ 0.04
TMEM116-202ENST00000437003 DLC1Q96QB1 1528 aa15.33■□□□□ 0.04
TMEM116-202ENST00000437003 GOLGA6L22H0YM25 854 aa15.32■□□□□ 0.04
TMEM116-202ENST00000437003 WASLO00401 505 aaPredicted RBP15.32■□□□□ 0.04
TMEM116-202ENST00000437003 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
TMEM116-202ENST00000437003 KIF2CQ99661 725 aa15.32■□□□□ 0.04
TMEM116-202ENST00000437003 ESF1Q9H501 851 aaKnown RBP15.32■□□□□ 0.04
TMEM116-202ENST00000437003 EMILIN1Q9Y6C2 1016 aa15.32■□□□□ 0.04
TMEM116-202ENST00000437003 SPATA31D1Q6ZQQ2 1576 aa15.32■□□□□ 0.04
TMEM116-202ENST00000437003 TMEM132AQ24JP5 1023 aa15.31■□□□□ 0.04
TMEM116-202ENST00000437003 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.31■□□□□ 0.04
TMEM116-202ENST00000437003 NME9Q86XW9 330 aa15.31■□□□□ 0.04
TMEM116-202ENST00000437003 REREQ9P2R6 1566 aa15.31■□□□□ 0.04
TMEM116-202ENST00000437003 LRRC7Q96NW7 1537 aa15.31■□□□□ 0.04
TMEM116-202ENST00000437003 K7ELQ4 463 aaPredicted RBP15.31■□□□□ 0.04
TMEM116-202ENST00000437003 PPIP5K1Q6PFW1 1433 aa15.31■□□□□ 0.04
TMEM116-202ENST00000437003 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
TMEM116-202ENST00000437003 TSPYL6Q8N831 410 aa15.3■□□□□ 0.04
TMEM116-202ENST00000437003 ZRANB1Q9UGI0 708 aa15.3■□□□□ 0.04
TMEM116-202ENST00000437003 MAP2P11137 1827 aaKnown RBP15.3■□□□□ 0.04
TMEM116-202ENST00000437003 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.3■□□□□ 0.04
TMEM116-202ENST00000437003 METP08581 1390 aa15.3■□□□□ 0.04
TMEM116-202ENST00000437003 FAM135BQ49AJ0 1406 aa15.3■□□□□ 0.04
TMEM116-202ENST00000437003 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
TMEM116-202ENST00000437003 NFE2L2Q16236 605 aa15.3■□□□□ 0.04
TMEM116-202ENST00000437003 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
TMEM116-202ENST00000437003 CAVIN1Q6NZI2 390 aaKnown RBP15.3■□□□□ 0.04
TMEM116-202ENST00000437003 NUCB1Q02818 461 aa15.29■□□□□ 0.04
TMEM116-202ENST00000437003 ANKRD45Q5TZF3 282 aa15.29■□□□□ 0.04
TMEM116-202ENST00000437003 MCTP1Q6DN14 999 aa15.29■□□□□ 0.04
TMEM116-202ENST00000437003 CHD1LQ86WJ1 897 aa15.29■□□□□ 0.04
TMEM116-202ENST00000437003 PTMSP20962 102 aa15.29■□□□□ 0.04
TMEM116-202ENST00000437003 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
TMEM116-202ENST00000437003 RIMBP3CA6NJZ7 1639 aa15.29■□□□□ 0.04
TMEM116-202ENST00000437003 RIMBP3BA6NNM3 1639 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms