RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 KDM2AQ9Y2K7 1162 aa6.51□□□□□ -1.37
LINC01239-202ENST00000436786 RGPD8O14715 1765 aaPredicted RBP6.51□□□□□ -1.37
LINC01239-202ENST00000436786 USP32Q8NFA0 1604 aa6.51□□□□□ -1.37
LINC01239-202ENST00000436786 FAM83GA6ND36 823 aa6.51□□□□□ -1.37
LINC01239-202ENST00000436786 G3V3G9 751 aa6.51□□□□□ -1.37
LINC01239-202ENST00000436786 VPS72Q15906 364 aa6.51□□□□□ -1.37
LINC01239-202ENST00000436786 DCAF8Q5TAQ9 597 aa6.51□□□□□ -1.37
LINC01239-202ENST00000436786 SEPT12Q8IYM1 358 aa6.51□□□□□ -1.37
LINC01239-202ENST00000436786 DLC1Q96QB1 1528 aa6.51□□□□□ -1.37
LINC01239-202ENST00000436786 GOLGA2Q08379 1002 aa6.5□□□□□ -1.37
LINC01239-202ENST00000436786 MIER1Q8N108 512 aa6.5□□□□□ -1.37
LINC01239-202ENST00000436786 HCSTQ9UBK5 93 aa6.5□□□□□ -1.37
LINC01239-202ENST00000436786 CCDC9Q9Y3X0 531 aaKnown RBP6.5□□□□□ -1.37
LINC01239-202ENST00000436786 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.5□□□□□ -1.37
LINC01239-202ENST00000436786 MINK1Q8N4C8 1332 aaPredicted RBP6.5□□□□□ -1.37
LINC01239-202ENST00000436786 ADGRB1O14514 1584 aa6.5□□□□□ -1.37
LINC01239-202ENST00000436786 ARHGEF10O15013 1369 aa6.5□□□□□ -1.37
LINC01239-202ENST00000436786 DCAF11Q8TEB1 546 aa6.5□□□□□ -1.37
LINC01239-202ENST00000436786 ANKARQ7Z5J8 1434 aa6.5□□□□□ -1.37
LINC01239-202ENST00000436786 PRR36Q9H6K5 1346 aa6.5□□□□□ -1.37
LINC01239-202ENST00000436786 ONECUT3O60422 494 aaPredicted RBP6.49□□□□□ -1.37
LINC01239-202ENST00000436786 BLMP54132 1417 aaPredicted RBP6.49□□□□□ -1.37
LINC01239-202ENST00000436786 WASLO00401 505 aaPredicted RBP6.49□□□□□ -1.37
LINC01239-202ENST00000436786 MKRN3Q13064 507 aaKnown RBP6.49□□□□□ -1.37
LINC01239-202ENST00000436786 DEFB132Q7Z7B7 95 aa6.49□□□□□ -1.37
LINC01239-202ENST00000436786 FAM212AQ96EL1 285 aa6.49□□□□□ -1.37
LINC01239-202ENST00000436786 VARS2Q5ST30 1063 aaKnown RBP6.48□□□□□ -1.37
LINC01239-202ENST00000436786 KRT27Q7Z3Y8 459 aa6.48□□□□□ -1.37
LINC01239-202ENST00000436786 ADGRB2O60241 1585 aa6.48□□□□□ -1.37
LINC01239-202ENST00000436786 PLCH1Q4KWH8 1693 aa6.48□□□□□ -1.37
LINC01239-202ENST00000436786 GPRASP1Q5JY77 1395 aa6.48□□□□□ -1.37
LINC01239-202ENST00000436786 BTG4Q9NY30 223 aa6.48□□□□□ -1.37
LINC01239-202ENST00000436786 ABCA3Q99758 1704 aa6.47□□□□□ -1.37
LINC01239-202ENST00000436786 SF3B2Q13435 895 aaKnown RBP6.47□□□□□ -1.37
LINC01239-202ENST00000436786 FAM98CQ17RN3 349 aaKnown RBP6.47□□□□□ -1.37
LINC01239-202ENST00000436786 NGDNQ8NEJ9 315 aaKnown RBP6.47□□□□□ -1.37
LINC01239-202ENST00000436786 TRPM3Q9HCF6 1732 aaPredicted RBP6.47□□□□□ -1.37
LINC01239-202ENST00000436786 EIF3AQ14152 1382 aaKnown RBP6.47□□□□□ -1.37
LINC01239-202ENST00000436786 BRWD3Q6RI45 1802 aa6.47□□□□□ -1.37
LINC01239-202ENST00000436786 A0A0G2JS52 829 aa6.47□□□□□ -1.37
LINC01239-202ENST00000436786 MYT1Q01538 1121 aa6.47□□□□□ -1.37
LINC01239-202ENST00000436786 STAC3Q96MF2 364 aa6.47□□□□□ -1.37
LINC01239-202ENST00000436786 ZSWIM6Q9HCJ5 1215 aa6.47□□□□□ -1.37
LINC01239-202ENST00000436786 NWD2Q9ULI1 1742 aa6.47□□□□□ -1.37
LINC01239-202ENST00000436786 TULP4Q9NRJ4 1543 aa6.46□□□□□ -1.37
LINC01239-202ENST00000436786 HOXB3P14651 431 aaPredicted RBP6.46□□□□□ -1.38
LINC01239-202ENST00000436786 PDCD7Q8N8D1 485 aaKnown RBP6.46□□□□□ -1.38
LINC01239-202ENST00000436786 NUDT16Q96DE0 195 aaKnown RBP6.46□□□□□ -1.38
LINC01239-202ENST00000436786 IRX2Q9BZI1 471 aaPredicted RBP6.46□□□□□ -1.38
LINC01239-202ENST00000436786 HRCP23327 699 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 ALS2Q96Q42 1657 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 FAM182BQ5T319 152 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 CDK19Q9BWU1 502 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 PRDM11Q9NQV5 511 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 NRAPQ86VF7 1730 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 SPATA31A5Q5VU36 1347 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 SPATA31A7Q8IWB4 1347 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 EP400Q96L91 3159 aa6.45□□□□□ -1.38
LINC01239-202ENST00000436786 COL14A1Q05707 1796 aaKnown RBP6.44□□□□□ -1.38
LINC01239-202ENST00000436786 NUTM2GQ5VZR2 741 aa6.44□□□□□ -1.38
LINC01239-202ENST00000436786 BAG6P46379 1132 aa6.44□□□□□ -1.38
LINC01239-202ENST00000436786 CHRNA2Q15822 529 aa6.44□□□□□ -1.38
LINC01239-202ENST00000436786 KIAA0232Q92628 1395 aa6.44□□□□□ -1.38
LINC01239-202ENST00000436786 ATP7BP35670 1465 aa6.44□□□□□ -1.38
LINC01239-202ENST00000436786 PSDA5PKW4 1024 aaPredicted RBP6.43□□□□□ -1.38
LINC01239-202ENST00000436786 ZC3H6P61129 1189 aaKnown RBP6.43□□□□□ -1.38
LINC01239-202ENST00000436786 NBPF8Q3BBV2 869 aa6.43□□□□□ -1.38
LINC01239-202ENST00000436786 ARHGEF28Q8N1W1 1705 aaKnown RBP6.43□□□□□ -1.38
LINC01239-202ENST00000436786 CRYBG1Q9Y4K1 1723 aa6.43□□□□□ -1.38
LINC01239-202ENST00000436786 ACEP12821 1306 aa6.43□□□□□ -1.38
LINC01239-202ENST00000436786 EN1Q05925 392 aaPredicted RBP6.43□□□□□ -1.38
LINC01239-202ENST00000436786 NBPF1Q3BBV0 1214 aa6.43□□□□□ -1.38
LINC01239-202ENST00000436786 STRN4Q9NRL3 753 aa6.43□□□□□ -1.38
LINC01239-202ENST00000436786 POLR3AO14802 1390 aaPredicted RBP6.42□□□□□ -1.38
LINC01239-202ENST00000436786 SPATA31A1Q5TZJ5 1347 aa6.42□□□□□ -1.38
LINC01239-202ENST00000436786 PLEKHG3A1L390 1219 aa6.42□□□□□ -1.38
LINC01239-202ENST00000436786 ANKRD13DQ6ZTN6 518 aa6.42□□□□□ -1.38
LINC01239-202ENST00000436786 THSD7AQ9UPZ6 1657 aa6.41□□□□□ -1.38
LINC01239-202ENST00000436786 EVA1CP58658 441 aa6.41□□□□□ -1.38
LINC01239-202ENST00000436786 ABTB2Q8N961 1025 aa6.41□□□□□ -1.38
LINC01239-202ENST00000436786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.41□□□□□ -1.38
LINC01239-202ENST00000436786 USP35Q9P2H5 1018 aa6.41□□□□□ -1.38
LINC01239-202ENST00000436786 ITSN1Q15811 1721 aa6.41□□□□□ -1.38
LINC01239-202ENST00000436786 TRIM37O94972 964 aa6.41□□□□□ -1.38
LINC01239-202ENST00000436786 SRPK2P78362 688 aaKnown RBP6.4□□□□□ -1.38
LINC01239-202ENST00000436786 EZH2Q15910 746 aaKnown RBP6.4□□□□□ -1.38
LINC01239-202ENST00000436786 LARP1Q6PKG0 1096 aaKnown RBP6.4□□□□□ -1.38
LINC01239-202ENST00000436786 FAM196AQ6ZSG2 479 aa6.4□□□□□ -1.38
LINC01239-202ENST00000436786 CABP2Q9NPB3 220 aa6.4□□□□□ -1.38
LINC01239-202ENST00000436786 TOPAZ1Q8N9V7 1692 aa6.4□□□□□ -1.39
LINC01239-202ENST00000436786 PHRF1Q9P1Y6 1649 aaKnown RBP6.4□□□□□ -1.39
LINC01239-202ENST00000436786 SRCAPQ6ZRS2 3230 aa6.4□□□□□ -1.39
LINC01239-202ENST00000436786 R3HDM1Q15032 1099 aaKnown RBP6.39□□□□□ -1.39
LINC01239-202ENST00000436786 BARGINQ6ZT62 677 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 CAMKK2Q96RR4 588 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 PPIP5K1Q6PFW1 1433 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 SSH2Q76I76 1423 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 KIAA1210Q9ULL0 1709 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 CAMTA1Q9Y6Y1 1673 aa6.39□□□□□ -1.39
LINC01239-202ENST00000436786 USP19O94966 1318 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 671.9 ms