RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 KIF16BQ96L93 1317 aa16.89■□□□□ 0.29
SCRN1-207ENST00000434476 HMOX1P09601 288 aa16.88■□□□□ 0.29
SCRN1-207ENST00000434476 ATF7IPQ6VMQ6 1270 aa16.88■□□□□ 0.29
SCRN1-207ENST00000434476 PCDHB15Q9Y5E8 787 aa16.88■□□□□ 0.29
SCRN1-207ENST00000434476 SSH2Q76I76 1423 aa16.88■□□□□ 0.29
SCRN1-207ENST00000434476 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
SCRN1-207ENST00000434476 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
SCRN1-207ENST00000434476 C8orf34Q49A92 452 aa16.87■□□□□ 0.29
SCRN1-207ENST00000434476 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
SCRN1-207ENST00000434476 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
SCRN1-207ENST00000434476 TNNQ9UQP3 1299 aa16.87■□□□□ 0.29
SCRN1-207ENST00000434476 USP31Q70CQ4 1352 aa16.87■□□□□ 0.29
SCRN1-207ENST00000434476 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
SCRN1-207ENST00000434476 FER1L4A9Z1Z3 1794 aa16.87■□□□□ 0.29
SCRN1-207ENST00000434476 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
SCRN1-207ENST00000434476 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
SCRN1-207ENST00000434476 ZNF853P0CG23 659 aa16.86■□□□□ 0.29
SCRN1-207ENST00000434476 RGS3P49796 1198 aa16.86■□□□□ 0.29
SCRN1-207ENST00000434476 NRKQ7Z2Y5 1582 aa16.86■□□□□ 0.29
SCRN1-207ENST00000434476 TRIM27P14373 513 aa16.86■□□□□ 0.29
SCRN1-207ENST00000434476 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
SCRN1-207ENST00000434476 ARHGAP45Q92619 1136 aa16.84■□□□□ 0.29
SCRN1-207ENST00000434476 EIF4A2Q14240 407 aaKnown RBP16.83■□□□□ 0.28
SCRN1-207ENST00000434476 CFAP44Q96MT7 982 aa16.83■□□□□ 0.28
SCRN1-207ENST00000434476 ANKARQ7Z5J8 1434 aa16.82■□□□□ 0.28
SCRN1-207ENST00000434476 VAMP4O75379 141 aa16.82■□□□□ 0.28
SCRN1-207ENST00000434476 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
SCRN1-207ENST00000434476 CHMP4BQ9H444 224 aaKnown RBP16.82■□□□□ 0.28
SCRN1-207ENST00000434476 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
SCRN1-207ENST00000434476 LAS1LQ9Y4W2 734 aaKnown RBP16.81■□□□□ 0.28
SCRN1-207ENST00000434476 XRN1Q8IZH2 1706 aaKnown RBP16.8■□□□□ 0.28
SCRN1-207ENST00000434476 NUTM2FA1L443 756 aa16.8■□□□□ 0.28
SCRN1-207ENST00000434476 ITPRIPQ8IWB1 547 aa16.8■□□□□ 0.28
SCRN1-207ENST00000434476 NGDNQ8NEJ9 315 aaKnown RBP16.8■□□□□ 0.28
SCRN1-207ENST00000434476 PDZRN3Q9UPQ7 1066 aa16.8■□□□□ 0.28
SCRN1-207ENST00000434476 NALCNQ8IZF0 1738 aa16.79■□□□□ 0.28
SCRN1-207ENST00000434476 TMEM57Q8N5G2 664 aa16.79■□□□□ 0.28
SCRN1-207ENST00000434476 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
SCRN1-207ENST00000434476 MBIPQ9NS73 344 aa16.79■□□□□ 0.28
SCRN1-207ENST00000434476 ZBTB40Q9NUA8 1239 aa16.79■□□□□ 0.28
SCRN1-207ENST00000434476 HAP1P54257 671 aaPredicted RBP16.78■□□□□ 0.28
SCRN1-207ENST00000434476 SULT6B1Q6IMI4 303 aa16.78■□□□□ 0.28
SCRN1-207ENST00000434476 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
SCRN1-207ENST00000434476 THUMPD2Q9BTF0 503 aaKnown RBP16.77■□□□□ 0.28
SCRN1-207ENST00000434476 CEP170BQ9Y4F5 1589 aaPredicted RBP16.77■□□□□ 0.27
SCRN1-207ENST00000434476 SBNO1A3KN83 1393 aa16.76■□□□□ 0.27
SCRN1-207ENST00000434476 ARHGEF10O15013 1369 aa16.76■□□□□ 0.27
SCRN1-207ENST00000434476 RIMS1Q86UR5 1692 aaKnown RBP16.76■□□□□ 0.27
SCRN1-207ENST00000434476 KCNA6P17658 529 aa16.75■□□□□ 0.27
SCRN1-207ENST00000434476 TWISTNBQ3B726 338 aaPredicted RBP16.75■□□□□ 0.27
SCRN1-207ENST00000434476 HSP90AB2PQ58FF8 381 aa16.75■□□□□ 0.27
SCRN1-207ENST00000434476 KIF24Q5T7B8 1368 aa16.75■□□□□ 0.27
SCRN1-207ENST00000434476 ANKLE2Q86XL3 938 aa16.75■□□□□ 0.27
SCRN1-207ENST00000434476 FLT4P35916 1363 aa16.74■□□□□ 0.27
SCRN1-207ENST00000434476 SMC5Q8IY18 1101 aa16.74■□□□□ 0.27
SCRN1-207ENST00000434476 MAP3K19Q56UN5 1328 aa16.74■□□□□ 0.27
SCRN1-207ENST00000434476 CHL1O00533 1208 aa16.73■□□□□ 0.27
SCRN1-207ENST00000434476 AEBP1Q8IUX7 1158 aa16.73■□□□□ 0.27
SCRN1-207ENST00000434476 TSPYL6Q8N831 410 aa16.73■□□□□ 0.27
SCRN1-207ENST00000434476 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
SCRN1-207ENST00000434476 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
SCRN1-207ENST00000434476 PEAK1Q9H792 1746 aa16.72■□□□□ 0.27
SCRN1-207ENST00000434476 C8orf58Q8NAV2 365 aa16.72■□□□□ 0.27
SCRN1-207ENST00000434476 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
SCRN1-207ENST00000434476 FAM83GA6ND36 823 aa16.71■□□□□ 0.27
SCRN1-207ENST00000434476 ZBTB7BO15156 539 aaPredicted RBP16.71■□□□□ 0.27
SCRN1-207ENST00000434476 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
SCRN1-207ENST00000434476 KDRP35968 1356 aa16.7■□□□□ 0.26
SCRN1-207ENST00000434476 ABCC4O15439 1325 aa16.7■□□□□ 0.26
SCRN1-207ENST00000434476 DLG5Q8TDM6 1919 aa16.7■□□□□ 0.26
SCRN1-207ENST00000434476 AMPHP49418 695 aa16.7■□□□□ 0.26
SCRN1-207ENST00000434476 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
SCRN1-207ENST00000434476 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
SCRN1-207ENST00000434476 NLRP6P59044 892 aa16.69■□□□□ 0.26
SCRN1-207ENST00000434476 DCTN1Q14203 1278 aa16.69■□□□□ 0.26
SCRN1-207ENST00000434476 VIRMAQ69YN4 1812 aaKnown RBP16.68■□□□□ 0.26
SCRN1-207ENST00000434476 USP19O94966 1318 aa16.68■□□□□ 0.26
SCRN1-207ENST00000434476 IGSF1Q8N6C5 1336 aa16.68■□□□□ 0.26
SCRN1-207ENST00000434476 ELL2O00472 640 aaPredicted RBP16.67■□□□□ 0.26
SCRN1-207ENST00000434476 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
SCRN1-207ENST00000434476 UPF2Q9HAU5 1272 aaKnown RBP16.67■□□□□ 0.26
SCRN1-207ENST00000434476 CRB1P82279 1406 aa16.67■□□□□ 0.26
SCRN1-207ENST00000434476 PIK3C2AO00443 1686 aa16.67■□□□□ 0.26
SCRN1-207ENST00000434476 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
SCRN1-207ENST00000434476 NUCB1Q02818 461 aa16.67■□□□□ 0.26
SCRN1-207ENST00000434476 ZNF142P52746 1687 aaPredicted RBP16.66■□□□□ 0.26
SCRN1-207ENST00000434476 RTF1Q92541 710 aaKnown RBP16.66■□□□□ 0.26
SCRN1-207ENST00000434476 GCC1Q96CN9 775 aa16.66■□□□□ 0.26
SCRN1-207ENST00000434476 EYA1Q99502 592 aa16.66■□□□□ 0.26
SCRN1-207ENST00000434476 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
SCRN1-207ENST00000434476 PHF8Q9UPP1 1060 aa16.66■□□□□ 0.26
SCRN1-207ENST00000434476 RGPD8O14715 1765 aaPredicted RBP16.65■□□□□ 0.26
SCRN1-207ENST00000434476 SOX12O15370 315 aa16.65■□□□□ 0.26
SCRN1-207ENST00000434476 CHD2O14647 1828 aaKnown RBP16.64■□□□□ 0.25
SCRN1-207ENST00000434476 NBR1Q14596 966 aa16.64■□□□□ 0.25
SCRN1-207ENST00000434476 MTHFSDQ2M296 383 aaKnown RBP16.64■□□□□ 0.25
SCRN1-207ENST00000434476 INTS3Q68E01 1043 aaKnown RBP16.64■□□□□ 0.25
SCRN1-207ENST00000434476 MCM10Q7L590 875 aa16.64■□□□□ 0.25
SCRN1-207ENST00000434476 ABTB2Q8N961 1025 aa16.64■□□□□ 0.25
SCRN1-207ENST00000434476 SEC24BO95487 1268 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms