RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 NR1I2O75469 434 aa10.29□□□□□ -0.76
GTF2A1-202ENST00000434192 GCGRP47871 477 aa10.29□□□□□ -0.76
GTF2A1-202ENST00000434192 TRAPPC8Q9Y2L5 1435 aa10.29□□□□□ -0.76
GTF2A1-202ENST00000434192 ATP10AO60312 1499 aa10.29□□□□□ -0.76
GTF2A1-202ENST00000434192 PTPRMP28827 1452 aa10.29□□□□□ -0.76
GTF2A1-202ENST00000434192 EIF2AK4Q9P2K8 1649 aaKnown RBP10.29□□□□□ -0.76
GTF2A1-202ENST00000434192 ZMYND10O75800 440 aa10.28□□□□□ -0.76
GTF2A1-202ENST00000434192 SCUBE3Q8IX30 993 aa10.28□□□□□ -0.76
GTF2A1-202ENST00000434192 ANKRD30AQ9BXX3 1397 aa10.27□□□□□ -0.76
GTF2A1-202ENST00000434192 NAIPQ13075 1403 aa10.27□□□□□ -0.77
GTF2A1-202ENST00000434192 GGCXP38435 758 aa10.27□□□□□ -0.77
GTF2A1-202ENST00000434192 HNRNPMP52272 730 aaKnown RBP eCLIP10.27□□□□□ -0.77
GTF2A1-202ENST00000434192 BARGINQ6ZT62 677 aa10.27□□□□□ -0.77
GTF2A1-202ENST00000434192 AGLP35573 1532 aa10.27□□□□□ -0.77
GTF2A1-202ENST00000434192 DUOX2Q9NRD8 1548 aa10.27□□□□□ -0.77
GTF2A1-202ENST00000434192 RTEL1-TNFRSF6BF6WH68 1400 aa10.26□□□□□ -0.77
GTF2A1-202ENST00000434192 SETD5Q9C0A6 1442 aa10.26□□□□□ -0.77
GTF2A1-202ENST00000434192 NCOA1Q15788 1441 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 CLTCQ00610 1675 aaKnown RBP10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 SLC24A1O60721 1099 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 TSPY4P0CV99 314 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 TSPY10P0CW01 314 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 CD46P15529 392 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 MORN1Q5T089 497 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 PRKD2Q9BZL6 878 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 UNC13BO14795 1591 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 RAB3GAP2Q9H2M9 1393 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 KIF15Q9NS87 1388 aa10.25□□□□□ -0.77
GTF2A1-202ENST00000434192 S1PR4O95977 384 aa10.24□□□□□ -0.77
GTF2A1-202ENST00000434192 IRX2Q9BZI1 471 aaPredicted RBP10.24□□□□□ -0.77
GTF2A1-202ENST00000434192 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
GTF2A1-202ENST00000434192 DEPDC5O75140 1603 aa10.24□□□□□ -0.77
GTF2A1-202ENST00000434192 ERBINQ96RT1 1412 aa10.24□□□□□ -0.77
GTF2A1-202ENST00000434192 ADH1BP00325 375 aa10.23□□□□□ -0.77
GTF2A1-202ENST00000434192 CLCN1P35523 988 aa10.23□□□□□ -0.77
GTF2A1-202ENST00000434192 CHIC2Q9UKJ5 165 aa10.23□□□□□ -0.77
GTF2A1-202ENST00000434192 SPAG9O60271 1321 aaKnown RBP10.23□□□□□ -0.77
GTF2A1-202ENST00000434192 RNF223E7ERA6 249 aa10.22□□□□□ -0.77
GTF2A1-202ENST00000434192 PPEF1O14829 653 aaPredicted RBP10.22□□□□□ -0.77
GTF2A1-202ENST00000434192 SPSB2Q99619 263 aa10.22□□□□□ -0.77
GTF2A1-202ENST00000434192 TMUB1Q9BVT8 246 aa10.22□□□□□ -0.77
GTF2A1-202ENST00000434192 SLC27A5Q9Y2P5 690 aa10.22□□□□□ -0.77
GTF2A1-202ENST00000434192 ANKRD50Q9ULJ7 1429 aa10.22□□□□□ -0.77
GTF2A1-202ENST00000434192 RNF17Q9BXT8 1623 aaKnown RBP10.22□□□□□ -0.77
GTF2A1-202ENST00000434192 REPIN1Q9BWE0 567 aaKnown RBP10.21□□□□□ -0.77
GTF2A1-202ENST00000434192 ARID4BQ4LE39 1312 aaPredicted RBP10.21□□□□□ -0.78
GTF2A1-202ENST00000434192 KDM5DQ9BY66 1539 aa10.21□□□□□ -0.78
GTF2A1-202ENST00000434192 ZNF142P52746 1687 aaPredicted RBP10.21□□□□□ -0.78
GTF2A1-202ENST00000434192 ZC3H13Q5T200 1668 aaKnown RBP10.2□□□□□ -0.78
GTF2A1-202ENST00000434192 IQGAP3Q86VI3 1631 aa10.2□□□□□ -0.78
GTF2A1-202ENST00000434192 SLC6A16Q9GZN6 736 aa10.2□□□□□ -0.78
GTF2A1-202ENST00000434192 RRP7BPQ9NSQ0 103 aa10.2□□□□□ -0.78
GTF2A1-202ENST00000434192 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
GTF2A1-202ENST00000434192 PRDM15P57071 1507 aaPredicted RBP10.19□□□□□ -0.78
GTF2A1-202ENST00000434192 A2MP01023 1474 aa10.19□□□□□ -0.78
GTF2A1-202ENST00000434192 LMTK3Q96Q04 1460 aa10.19□□□□□ -0.78
GTF2A1-202ENST00000434192 KDM4AO75164 1064 aa10.19□□□□□ -0.78
GTF2A1-202ENST00000434192 TTLL12Q14166 644 aaPredicted RBP10.19□□□□□ -0.78
GTF2A1-202ENST00000434192 AFAP1Q8N556 730 aa10.19□□□□□ -0.78
GTF2A1-202ENST00000434192 GRIPAP1Q4V328 841 aa10.18□□□□□ -0.78
GTF2A1-202ENST00000434192 STRCQ7RTU9 1775 aa10.18□□□□□ -0.78
GTF2A1-202ENST00000434192 CEP152O94986 1710 aa10.18□□□□□ -0.78
GTF2A1-202ENST00000434192 MROH1Q8NDA8 1641 aa10.18□□□□□ -0.78
GTF2A1-202ENST00000434192 MYO3AQ8NEV4 1616 aa10.18□□□□□ -0.78
GTF2A1-202ENST00000434192 CFAP65Q6ZU64 1925 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-202ENST00000434192 ACIN1Q9UKV3 1341 aaKnown RBP10.17□□□□□ -0.78
GTF2A1-202ENST00000434192 FMNL1O95466 1100 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-202ENST00000434192 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
GTF2A1-202ENST00000434192 V9GY48 417 aaPredicted RBP10.17□□□□□ -0.78
GTF2A1-202ENST00000434192 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
GTF2A1-202ENST00000434192 SSTR3P32745 418 aaPredicted RBP10.16□□□□□ -0.78
GTF2A1-202ENST00000434192 RNF19BQ6ZMZ0 732 aa10.16□□□□□ -0.78
GTF2A1-202ENST00000434192 HLA-CQ95604 372 aa10.16□□□□□ -0.78
GTF2A1-202ENST00000434192 POLR1AO95602 1720 aaPredicted RBP10.16□□□□□ -0.78
GTF2A1-202ENST00000434192 TET3O43151 1660 aa10.15□□□□□ -0.78
GTF2A1-202ENST00000434192 HRCP23327 699 aa10.15□□□□□ -0.78
GTF2A1-202ENST00000434192 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
GTF2A1-202ENST00000434192 AMHR2Q16671 573 aa10.14□□□□□ -0.79
GTF2A1-202ENST00000434192 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
GTF2A1-202ENST00000434192 CNTLNQ9NXG0 1405 aa10.14□□□□□ -0.79
GTF2A1-202ENST00000434192 VWDEQ8N2E2 1590 aa10.14□□□□□ -0.79
GTF2A1-202ENST00000434192 DHX57Q6P158 1386 aaKnown RBP10.14□□□□□ -0.79
GTF2A1-202ENST00000434192 DHX29Q7Z478 1369 aaKnown RBP10.14□□□□□ -0.79
GTF2A1-202ENST00000434192 PZPP20742 1482 aa10.13□□□□□ -0.79
GTF2A1-202ENST00000434192 SLC19A1P41440 591 aa10.13□□□□□ -0.79
GTF2A1-202ENST00000434192 FAM160A2Q8N612 972 aaPredicted RBP10.13□□□□□ -0.79
GTF2A1-202ENST00000434192 EMID1Q96A84 441 aaPredicted RBP10.13□□□□□ -0.79
GTF2A1-202ENST00000434192 CAMSAP1Q5T5Y3 1602 aa10.13□□□□□ -0.79
GTF2A1-202ENST00000434192 TRIM66O15016 1216 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 HOXA2O43364 376 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 USP46P62068 366 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 GUCA2AQ02747 115 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 MLECQ14165 292 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 GIGYF2Q6Y7W6 1299 aaKnown RBP10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 BCANQ96GW7 911 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 AK7Q96M32 723 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 PRDM9Q9NQV7 894 aa10.12□□□□□ -0.79
GTF2A1-202ENST00000434192 SALL2Q9Y467 1007 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms